RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 LARP1Q6PKG0 1096 aaKnown RBP13.05□□□□□ -0.32
DDX41-203ENST00000504781 IFNL2Q8IZJ0 200 aa13.05□□□□□ -0.32
DDX41-203ENST00000504781 CEMIPQ8WUJ3 1361 aa13.05□□□□□ -0.32
DDX41-203ENST00000504781 COL5A2P05997 1499 aaPredicted RBP13.04□□□□□ -0.32
DDX41-203ENST00000504781 IPO8O15397 1037 aaKnown RBP13.04□□□□□ -0.32
DDX41-203ENST00000504781 RNMTO43148 476 aaKnown RBP13.04□□□□□ -0.32
DDX41-203ENST00000504781 EN1Q05925 392 aaPredicted RBP13.04□□□□□ -0.32
DDX41-203ENST00000504781 PSDA5PKW4 1024 aaPredicted RBP13.03□□□□□ -0.32
DDX41-203ENST00000504781 IL2RBP14784 551 aa13.03□□□□□ -0.32
DDX41-203ENST00000504781 TWISTNBQ3B726 338 aaPredicted RBP13.03□□□□□ -0.32
DDX41-203ENST00000504781 ZCRB1Q8TBF4 217 aaKnown RBP13.03□□□□□ -0.32
DDX41-203ENST00000504781 LGR6Q9HBX8 967 aa13.03□□□□□ -0.32
DDX41-203ENST00000504781 TSPYL4Q9UJ04 414 aa13.03□□□□□ -0.32
DDX41-203ENST00000504781 PLIN1O60240 522 aa13.02□□□□□ -0.33
DDX41-203ENST00000504781 TRIM37O94972 964 aa13.02□□□□□ -0.33
DDX41-203ENST00000504781 IRX6P78412 446 aaPredicted RBP13.02□□□□□ -0.33
DDX41-203ENST00000504781 TEFQ10587 303 aa13.02□□□□□ -0.33
DDX41-203ENST00000504781 AAMPQ13685 434 aa13.02□□□□□ -0.33
DDX41-203ENST00000504781 C8orf58Q8NAV2 365 aa13.02□□□□□ -0.33
DDX41-203ENST00000504781 ARHGAP45Q92619 1136 aa13.02□□□□□ -0.33
DDX41-203ENST00000504781 DCAF5Q96JK2 942 aa13.02□□□□□ -0.33
DDX41-203ENST00000504781 THRAP3Q9Y2W1 955 aaKnown RBP13.02□□□□□ -0.33
DDX41-203ENST00000504781 OVOS2A0A0G2JMS6 1433 aa13.02□□□□□ -0.33
DDX41-203ENST00000504781 PHKG2P15735 406 aa13.01□□□□□ -0.33
DDX41-203ENST00000504781 FAM196AQ6ZSG2 479 aa13.01□□□□□ -0.33
DDX41-203ENST00000504781 TSPYL6Q8N831 410 aa13.01□□□□□ -0.33
DDX41-203ENST00000504781 CDCA7Q9BWT1 371 aaPredicted RBP13.01□□□□□ -0.33
DDX41-203ENST00000504781 NKX1-1Q15270 411 aaPredicted RBP13□□□□□ -0.33
DDX41-203ENST00000504781 ZKSCAN2Q63HK3 967 aa13□□□□□ -0.33
DDX41-203ENST00000504781 MPRIPQ6WCQ1 1025 aa13□□□□□ -0.33
DDX41-203ENST00000504781 BARGINQ6ZT62 677 aa13□□□□□ -0.33
DDX41-203ENST00000504781 SSH1Q8WYL5 1049 aa13□□□□□ -0.33
DDX41-203ENST00000504781 APBA3O96018 575 aa12.99□□□□□ -0.33
DDX41-203ENST00000504781 EZH2Q15910 746 aaKnown RBP12.99□□□□□ -0.33
DDX41-203ENST00000504781 SMC4Q9NTJ3 1288 aa12.99□□□□□ -0.33
DDX41-203ENST00000504781 MIS18AQ9NYP9 233 aa12.99□□□□□ -0.33
DDX41-203ENST00000504781 THSD7AQ9UPZ6 1657 aa12.99□□□□□ -0.33
DDX41-203ENST00000504781 KIF16BQ96L93 1317 aa12.98□□□□□ -0.33
DDX41-203ENST00000504781 BTBD11A6QL63 1104 aa12.98□□□□□ -0.33
DDX41-203ENST00000504781 ERVV-2B6SEH9 535 aa12.98□□□□□ -0.33
DDX41-203ENST00000504781 ELL2O00472 640 aaPredicted RBP12.98□□□□□ -0.33
DDX41-203ENST00000504781 CYP27B1O15528 508 aa12.98□□□□□ -0.33
DDX41-203ENST00000504781 HOXB7P09629 217 aa12.98□□□□□ -0.33
DDX41-203ENST00000504781 CANXP27824 592 aaKnown RBP12.98□□□□□ -0.33
DDX41-203ENST00000504781 MRPL50Q8N5N7 158 aaKnown RBP12.98□□□□□ -0.33
DDX41-203ENST00000504781 FRAT1Q92837 279 aaPredicted RBP12.98□□□□□ -0.33
DDX41-203ENST00000504781 SRCAPQ6ZRS2 3230 aa12.98□□□□□ -0.33
DDX41-203ENST00000504781 PCDH11XQ9BZA7 1347 aa12.97□□□□□ -0.33
DDX41-203ENST00000504781 PCDH11YQ9BZA8 1340 aa12.97□□□□□ -0.33
DDX41-203ENST00000504781 EXOC5O00471 708 aa12.97□□□□□ -0.33
DDX41-203ENST00000504781 R3HDM1Q15032 1099 aaKnown RBP12.97□□□□□ -0.33
DDX41-203ENST00000504781 ATF7IPQ6VMQ6 1270 aa12.97□□□□□ -0.33
DDX41-203ENST00000504781 EXOC6Q8TAG9 804 aa12.97□□□□□ -0.33
DDX41-203ENST00000504781 SLC52A2Q9HAB3 445 aa12.97□□□□□ -0.33
DDX41-203ENST00000504781 NOB1Q9ULX3 412 aaKnown RBP12.97□□□□□ -0.33
DDX41-203ENST00000504781 EIF4A1P60842 406 aaKnown RBP12.96□□□□□ -0.33
DDX41-203ENST00000504781 CCDC30Q5VVM6 783 aa12.96□□□□□ -0.33
DDX41-203ENST00000504781 DZIP1LQ8IYY4 767 aaKnown RBP12.96□□□□□ -0.33
DDX41-203ENST00000504781 CRBNQ96SW2 442 aa12.96□□□□□ -0.33
DDX41-203ENST00000504781 MEGF6O75095 1541 aa12.96□□□□□ -0.33
DDX41-203ENST00000504781 C20orf194Q5TEA3 1177 aa12.95□□□□□ -0.34
DDX41-203ENST00000504781 NFATC2IPQ8NCF5 419 aa12.95□□□□□ -0.34
DDX41-203ENST00000504781 CHMP4BQ9H444 224 aaKnown RBP12.95□□□□□ -0.34
DDX41-203ENST00000504781 PKD1L3Q7Z443 1732 aa12.94□□□□□ -0.34
DDX41-203ENST00000504781 PARP4Q9UKK3 1724 aaKnown RBP12.94□□□□□ -0.34
DDX41-203ENST00000504781 ADAMTS7Q9UKP4 1686 aa12.94□□□□□ -0.34
DDX41-203ENST00000504781 CABP4P57796 275 aa12.94□□□□□ -0.34
DDX41-203ENST00000504781 DDB1Q16531 1140 aa12.94□□□□□ -0.34
DDX41-203ENST00000504781 CCDC136Q96JN2 1154 aa12.94□□□□□ -0.34
DDX41-203ENST00000504781 CAMKK2Q96RR4 588 aa12.94□□□□□ -0.34
DDX41-203ENST00000504781 BCL2L13Q9BXK5 485 aa12.94□□□□□ -0.34
DDX41-203ENST00000504781 API5Q9BZZ5 524 aaKnown RBP12.94□□□□□ -0.34
DDX41-203ENST00000504781 LRRC37A3O60309 1634 aa12.94□□□□□ -0.34
DDX41-203ENST00000504781 STK31Q9BXU1 1019 aa12.93□□□□□ -0.34
DDX41-203ENST00000504781 CACNA1FO60840 1977 aa12.92□□□□□ -0.34
DDX41-203ENST00000504781 PTPRCP08575 1304 aa12.92□□□□□ -0.34
DDX41-203ENST00000504781 SCN11AQ9UI33 1791 aa12.92□□□□□ -0.34
DDX41-203ENST00000504781 SLC4A2P04920 1241 aa12.92□□□□□ -0.34
DDX41-203ENST00000504781 KRT24Q2M2I5 525 aa12.92□□□□□ -0.34
DDX41-203ENST00000504781 ZNF790Q6PG37 636 aa12.92□□□□□ -0.34
DDX41-203ENST00000504781 FTSJ3Q8IY81 847 aaKnown RBP12.92□□□□□ -0.34
DDX41-203ENST00000504781 PELP1Q8IZL8 1130 aaKnown RBP12.92□□□□□ -0.34
DDX41-203ENST00000504781 DDX54Q8TDD1 881 aaKnown RBP12.92□□□□□ -0.34
DDX41-203ENST00000504781 HEG1Q9ULI3 1381 aa12.92□□□□□ -0.34
DDX41-203ENST00000504781 VIRMAQ69YN4 1812 aaKnown RBP12.91□□□□□ -0.34
DDX41-203ENST00000504781 GIGYF1O75420 1035 aaPredicted RBP12.91□□□□□ -0.34
DDX41-203ENST00000504781 TRIM27P14373 513 aa12.91□□□□□ -0.34
DDX41-203ENST00000504781 MVPQ14764 893 aaKnown RBP12.91□□□□□ -0.34
DDX41-203ENST00000504781 PANK1Q8TE04 598 aa12.91□□□□□ -0.34
DDX41-203ENST00000504781 TNS1Q9HBL0 1735 aaKnown RBP12.91□□□□□ -0.34
DDX41-203ENST00000504781 DISP2A7MBM2 1401 aa12.9□□□□□ -0.34
DDX41-203ENST00000504781 ADRA2BP18089 450 aa12.9□□□□□ -0.34
DDX41-203ENST00000504781 NBPF14Q5TI25 921 aa12.9□□□□□ -0.34
DDX41-203ENST00000504781 DDX19BQ9UMR2 479 aa12.9□□□□□ -0.34
DDX41-203ENST00000504781 COG6Q9Y2V7 657 aa12.9□□□□□ -0.34
DDX41-203ENST00000504781 KDM6AO15550 1401 aaPredicted RBP12.89□□□□□ -0.35
DDX41-203ENST00000504781 KCNQ3O43525 872 aa12.89□□□□□ -0.35
DDX41-203ENST00000504781 RLBP1P12271 317 aa12.89□□□□□ -0.35
DDX41-203ENST00000504781 B4GALNT3Q6L9W6 998 aa12.89□□□□□ -0.35
DDX41-203ENST00000504781 CLUAP1Q96AJ1 413 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms