RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 NGEFQ8N5V2 710 aa18.29■□□□□ 0.52
DDR1-253ENST00000504651 BCL11BQ9C0K0 894 aaPredicted RBP18.29■□□□□ 0.52
DDR1-253ENST00000504651 RGPD3A6NKT7 1758 aaPredicted RBP18.29■□□□□ 0.52
DDR1-253ENST00000504651 RGPD4Q7Z3J3 1758 aa18.29■□□□□ 0.52
DDR1-253ENST00000504651 UBR2Q8IWV8 1755 aa18.27■□□□□ 0.52
DDR1-253ENST00000504651 LY75O60449 1722 aa18.27■□□□□ 0.52
DDR1-253ENST00000504651 PTF1AQ7RTS3 328 aa18.27■□□□□ 0.52
DDR1-253ENST00000504651 NFATC2IPQ8NCF5 419 aa18.27■□□□□ 0.52
DDR1-253ENST00000504651 PIGBQ92521 554 aa18.27■□□□□ 0.52
DDR1-253ENST00000504651 CALD1Q05682 793 aaKnown RBP18.26■□□□□ 0.51
DDR1-253ENST00000504651 SF3B2Q13435 895 aaKnown RBP18.26■□□□□ 0.51
DDR1-253ENST00000504651 WWC1Q8IX03 1113 aa18.26■□□□□ 0.51
DDR1-253ENST00000504651 EP400Q96L91 3159 aa18.23■□□□□ 0.51
DDR1-253ENST00000504651 PALLDQ8WX93 1383 aa18.23■□□□□ 0.51
DDR1-253ENST00000504651 BTBD11A6QL63 1104 aa18.23■□□□□ 0.51
DDR1-253ENST00000504651 APBA3O96018 575 aa18.23■□□□□ 0.51
DDR1-253ENST00000504651 TAF7Q15545 349 aaPredicted RBP18.23■□□□□ 0.51
DDR1-253ENST00000504651 LAS1LQ9Y4W2 734 aaKnown RBP18.23■□□□□ 0.51
DDR1-253ENST00000504651 KCPQ6ZWJ8 1503 aa18.23■□□□□ 0.51
DDR1-253ENST00000504651 TTC5Q8N0Z6 440 aa18.22■□□□□ 0.51
DDR1-253ENST00000504651 SMARCC1Q92922 1105 aaPredicted RBP18.22■□□□□ 0.51
DDR1-253ENST00000504651 ASAP1Q9ULH1 1129 aa18.22■□□□□ 0.51
DDR1-253ENST00000504651 ZNF521Q96K83 1311 aa18.22■□□□□ 0.51
DDR1-253ENST00000504651 RREB1Q92766 1687 aa18.22■□□□□ 0.51
DDR1-253ENST00000504651 SLC39A6Q13433 755 aa18.21■□□□□ 0.51
DDR1-253ENST00000504651 CCDC125Q86Z20 511 aa18.21■□□□□ 0.51
DDR1-253ENST00000504651 WDR63Q8IWG1 891 aa18.21■□□□□ 0.51
DDR1-253ENST00000504651 ATG3Q9NT62 314 aa18.21■□□□□ 0.51
DDR1-253ENST00000504651 TSPYL4Q9UJ04 414 aa18.21■□□□□ 0.51
DDR1-253ENST00000504651 ZNF831Q5JPB2 1677 aa18.21■□□□□ 0.51
DDR1-253ENST00000504651 TJP1Q07157 1748 aa18.2■□□□□ 0.5
DDR1-253ENST00000504651 CICQ96RK0 1608 aaPredicted RBP18.2■□□□□ 0.5
DDR1-253ENST00000504651 BAG6P46379 1132 aa18.2■□□□□ 0.5
DDR1-253ENST00000504651 UPF1Q92900 1129 aaKnown RBP eCLIP18.2■□□□□ 0.5
DDR1-253ENST00000504651 IFT57Q9NWB7 429 aa18.2■□□□□ 0.5
DDR1-253ENST00000504651 IL16Q14005 1332 aa18.2■□□□□ 0.5
DDR1-253ENST00000504651 LAMB4A4D0S4 1761 aa18.19■□□□□ 0.5
DDR1-253ENST00000504651 C5P01031 1676 aa18.19■□□□□ 0.5
DDR1-253ENST00000504651 GNAI1P63096 354 aa18.19■□□□□ 0.5
DDR1-253ENST00000504651 ZNF790Q6PG37 636 aa18.19■□□□□ 0.5
DDR1-253ENST00000504651 CFAP44Q96MT7 982 aa18.19■□□□□ 0.5
DDR1-253ENST00000504651 YTHDC1Q96MU7 727 aaKnown RBP18.19■□□□□ 0.5
DDR1-253ENST00000504651 MIS18AQ9NYP9 233 aa18.19■□□□□ 0.5
DDR1-253ENST00000504651 ZBED9Q6R2W3 1325 aa18.19■□□□□ 0.5
DDR1-253ENST00000504651 BABAM1Q9NWV8 329 aa18.18■□□□□ 0.5
DDR1-253ENST00000504651 NUP188Q5SRE5 1749 aa18.18■□□□□ 0.5
DDR1-253ENST00000504651 TAF1LQ8IZX4 1826 aa18.17■□□□□ 0.5
DDR1-253ENST00000504651 GOLGA2Q08379 1002 aa18.17■□□□□ 0.5
DDR1-253ENST00000504651 RBM42Q9BTD8 480 aaKnown RBP18.17■□□□□ 0.5
DDR1-253ENST00000504651 COL5A3P25940 1745 aaPredicted RBP18.17■□□□□ 0.5
DDR1-253ENST00000504651 CHL1O00533 1208 aa18.16■□□□□ 0.5
DDR1-253ENST00000504651 PLSCR1O15162 318 aa18.16■□□□□ 0.5
DDR1-253ENST00000504651 KCNQ3O43525 872 aa18.16■□□□□ 0.5
DDR1-253ENST00000504651 PTCD1O75127 700 aaKnown RBP18.16■□□□□ 0.5
DDR1-253ENST00000504651 ZNF853P0CG23 659 aa18.16■□□□□ 0.5
DDR1-253ENST00000504651 MBIPQ9NS73 344 aa18.16■□□□□ 0.5
DDR1-253ENST00000504651 EN1Q05925 392 aaPredicted RBP18.15■□□□□ 0.5
DDR1-253ENST00000504651 DEFB132Q7Z7B7 95 aa18.15■□□□□ 0.5
DDR1-253ENST00000504651 FMNL2Q96PY5 1086 aa18.15■□□□□ 0.5
DDR1-253ENST00000504651 HEG1Q9ULI3 1381 aa18.15■□□□□ 0.5
DDR1-253ENST00000504651 LOC102724428A0A0B4J2F2 783 aa18.14■□□□□ 0.49
DDR1-253ENST00000504651 SIK1P57059 783 aa18.14■□□□□ 0.49
DDR1-253ENST00000504651 TSR2Q969E8 191 aaKnown RBP18.14■□□□□ 0.49
DDR1-253ENST00000504651 ZNF496Q96IT1 587 aaPredicted RBP18.14■□□□□ 0.49
DDR1-253ENST00000504651 MYH16Q9H6N6 1097 aa18.14■□□□□ 0.49
DDR1-253ENST00000504651 CCNL1Q9UK58 526 aaPredicted RBP18.14■□□□□ 0.49
DDR1-253ENST00000504651 FANCIQ9NVI1 1328 aa18.14■□□□□ 0.49
DDR1-253ENST00000504651 E9PSI1 815 aa18.13■□□□□ 0.49
DDR1-253ENST00000504651 EZH2Q15910 746 aaKnown RBP18.13■□□□□ 0.49
DDR1-253ENST00000504651 SPINK5Q9NQ38 1064 aaPredicted RBP18.13■□□□□ 0.49
DDR1-253ENST00000504651 C4BP0C0L5 1744 aa18.12■□□□□ 0.49
DDR1-253ENST00000504651 ATP6V1AP38606 617 aa18.12■□□□□ 0.49
DDR1-253ENST00000504651 EIF4A1P60842 406 aaKnown RBP18.12■□□□□ 0.49
DDR1-253ENST00000504651 TXNRD1Q16881 649 aa18.12■□□□□ 0.49
DDR1-253ENST00000504651 SLC27A3Q5K4L6 730 aa18.12■□□□□ 0.49
DDR1-253ENST00000504651 CDCA7LQ96GN5 454 aa18.11■□□□□ 0.49
DDR1-253ENST00000504651 CAMKK2Q96RR4 588 aa18.11■□□□□ 0.49
DDR1-253ENST00000504651 KCNQ4P56696 695 aa18.1■□□□□ 0.49
DDR1-253ENST00000504651 SLFN5Q08AF3 891 aa18.1■□□□□ 0.49
DDR1-253ENST00000504651 VSIG10Q8N0Z9 540 aa18.1■□□□□ 0.49
DDR1-253ENST00000504651 SLC4A9Q96Q91 983 aa18.1■□□□□ 0.49
DDR1-253ENST00000504651 SNRPA1P09661 255 aaKnown RBP18.08■□□□□ 0.48
DDR1-253ENST00000504651 ITPK1Q13572 414 aa18.08■□□□□ 0.48
DDR1-253ENST00000504651 KRT24Q2M2I5 525 aa18.08■□□□□ 0.48
DDR1-253ENST00000504651 DNAJC10Q8IXB1 793 aa18.08■□□□□ 0.48
DDR1-253ENST00000504651 PROM2Q8N271 834 aa18.08■□□□□ 0.48
DDR1-253ENST00000504651 LRRC4BQ9NT99 713 aa18.08■□□□□ 0.48
DDR1-253ENST00000504651 TUBGCP6Q96RT7 1819 aa18.07■□□□□ 0.48
DDR1-253ENST00000504651 PRAMEF22A3QJZ6 481 aa18.06■□□□□ 0.48
DDR1-253ENST00000504651 GIGYF1O75420 1035 aaPredicted RBP18.06■□□□□ 0.48
DDR1-253ENST00000504651 LINC00116Q8NCU8 138 aa18.06■□□□□ 0.48
DDR1-253ENST00000504651 TEX13AQ9BXU3 409 aaPredicted RBP18.06■□□□□ 0.48
DDR1-253ENST00000504651 SOCS7O14512 581 aa18.05■□□□□ 0.48
DDR1-253ENST00000504651 HMGB2P26583 209 aaKnown RBP18.05■□□□□ 0.48
DDR1-253ENST00000504651 EXOSC9Q06265 439 aaKnown RBP18.05■□□□□ 0.48
DDR1-253ENST00000504651 DUSP27Q5VZP5 1158 aa18.05■□□□□ 0.48
DDR1-253ENST00000504651 QSER1Q2KHR3 1735 aa18.04■□□□□ 0.48
DDR1-253ENST00000504651 UBR3Q6ZT12 1888 aa18.04■□□□□ 0.48
DDR1-253ENST00000504651 ELL2O00472 640 aaPredicted RBP18.04■□□□□ 0.48
DDR1-253ENST00000504651 HOXB7P09629 217 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms