RNA–Protein interactions for RNA: ENST00000504512.5

LINC01411-201, Transcript of long intergenic non-protein coding RNA 1411, humanhuman

TSL 3

Gene LINC01411, Length 561 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01411-201ENST00000504512 NFATC2IPQ8NCF5 419 aa13□□□□□ -0.33
LINC01411-201ENST00000504512 SMARCC1Q92922 1105 aaPredicted RBP13□□□□□ -0.33
LINC01411-201ENST00000504512 PRKRIP1Q9H875 184 aaPredicted RBP13□□□□□ -0.33
LINC01411-201ENST00000504512 SIPA1L3O60292 1781 aaPredicted RBP12.99□□□□□ -0.33
LINC01411-201ENST00000504512 COL5A3P25940 1745 aaPredicted RBP12.99□□□□□ -0.33
LINC01411-201ENST00000504512 RNMTO43148 476 aaKnown RBP12.99□□□□□ -0.33
LINC01411-201ENST00000504512 ZBTB7AO95365 584 aa12.99□□□□□ -0.33
LINC01411-201ENST00000504512 AKT1S1Q96B36 256 aa12.99□□□□□ -0.33
LINC01411-201ENST00000504512 RBM42Q9BTD8 480 aaKnown RBP12.99□□□□□ -0.33
LINC01411-201ENST00000504512 TJP1Q07157 1748 aa12.99□□□□□ -0.33
LINC01411-201ENST00000504512 UBR3Q6ZT12 1888 aa12.98□□□□□ -0.33
LINC01411-201ENST00000504512 LOC102724428A0A0B4J2F2 783 aa12.98□□□□□ -0.33
LINC01411-201ENST00000504512 SIK1P57059 783 aa12.98□□□□□ -0.33
LINC01411-201ENST00000504512 GAS2L2Q8NHY3 880 aa12.98□□□□□ -0.33
LINC01411-201ENST00000504512 TFCP2L1Q9NZI6 479 aa12.98□□□□□ -0.33
LINC01411-201ENST00000504512 PNPLA7Q6ZV29 1317 aa12.97□□□□□ -0.33
LINC01411-201ENST00000504512 PTCD1O75127 700 aaKnown RBP12.97□□□□□ -0.33
LINC01411-201ENST00000504512 FCHSD2O94868 740 aa12.97□□□□□ -0.33
LINC01411-201ENST00000504512 ATP6V1AP38606 617 aa12.97□□□□□ -0.33
LINC01411-201ENST00000504512 ITPK1Q13572 414 aa12.97□□□□□ -0.33
LINC01411-201ENST00000504512 SMIM5Q71RC9 77 aa12.97□□□□□ -0.33
LINC01411-201ENST00000504512 LINC00116Q8NCU8 138 aa12.97□□□□□ -0.33
LINC01411-201ENST00000504512 SLC4A9Q96Q91 983 aa12.97□□□□□ -0.33
LINC01411-201ENST00000504512 SLC52A2Q9HAB3 445 aa12.97□□□□□ -0.33
LINC01411-201ENST00000504512 ZNF831Q5JPB2 1677 aa12.96□□□□□ -0.33
LINC01411-201ENST00000504512 GNAT3A8MTJ3 354 aa12.96□□□□□ -0.33
LINC01411-201ENST00000504512 SLC39A6Q13433 755 aa12.96□□□□□ -0.33
LINC01411-201ENST00000504512 AMIGO3Q86WK7 504 aa12.96□□□□□ -0.33
LINC01411-201ENST00000504512 ATF5Q9Y2D1 282 aaPredicted RBP12.96□□□□□ -0.33
LINC01411-201ENST00000504512 UBR2Q8IWV8 1755 aa12.96□□□□□ -0.34
LINC01411-201ENST00000504512 KCPQ6ZWJ8 1503 aa12.95□□□□□ -0.34
LINC01411-201ENST00000504512 IL17REQ8NFR9 667 aa12.95□□□□□ -0.34
LINC01411-201ENST00000504512 MSH5O43196 834 aa12.94□□□□□ -0.34
LINC01411-201ENST00000504512 PHF14O94880 888 aa12.94□□□□□ -0.34
LINC01411-201ENST00000504512 DCTN1Q14203 1278 aa12.94□□□□□ -0.34
LINC01411-201ENST00000504512 MCM10Q7L590 875 aa12.94□□□□□ -0.34
LINC01411-201ENST00000504512 CCDC146Q8IYE0 955 aa12.94□□□□□ -0.34
LINC01411-201ENST00000504512 AK7Q96M32 723 aa12.94□□□□□ -0.34
LINC01411-201ENST00000504512 PLEKHF1Q96S99 279 aa12.94□□□□□ -0.34
LINC01411-201ENST00000504512 SPON1Q9HCB6 807 aa12.94□□□□□ -0.34
LINC01411-201ENST00000504512 CICQ96RK0 1608 aaPredicted RBP12.94□□□□□ -0.34
LINC01411-201ENST00000504512 MYH14Q7Z406 1995 aaKnown RBP12.94□□□□□ -0.34
LINC01411-201ENST00000504512 MAPK8IP3Q9UPT6 1336 aa12.93□□□□□ -0.34
LINC01411-201ENST00000504512 TEFQ10587 303 aa12.93□□□□□ -0.34
LINC01411-201ENST00000504512 CEMIPQ8WUJ3 1361 aa12.93□□□□□ -0.34
LINC01411-201ENST00000504512 GNPATO15228 680 aa12.92□□□□□ -0.34
LINC01411-201ENST00000504512 NEFMP07197 916 aa12.92□□□□□ -0.34
LINC01411-201ENST00000504512 C4AP0C0L4 1744 aa12.92□□□□□ -0.34
LINC01411-201ENST00000504512 CCDC184Q52MB2 194 aa12.92□□□□□ -0.34
LINC01411-201ENST00000504512 COL23A1Q86Y22 540 aaPredicted RBP12.92□□□□□ -0.34
LINC01411-201ENST00000504512 PTGER2P43116 358 aa12.91□□□□□ -0.34
LINC01411-201ENST00000504512 WDR43Q15061 677 aaKnown RBP eCLIP12.91□□□□□ -0.34
LINC01411-201ENST00000504512 MSL1Q68DK7 614 aa12.91□□□□□ -0.34
LINC01411-201ENST00000504512 RTF1Q92541 710 aaKnown RBP12.91□□□□□ -0.34
LINC01411-201ENST00000504512 THUMPD2Q9BTF0 503 aaKnown RBP12.91□□□□□ -0.34
LINC01411-201ENST00000504512 MTFR1LQ9H019 292 aa12.91□□□□□ -0.34
LINC01411-201ENST00000504512 PPP1R1BQ9UD71 204 aaPredicted RBP12.91□□□□□ -0.34
LINC01411-201ENST00000504512 COL24A1Q17RW2 1714 aa12.91□□□□□ -0.34
LINC01411-201ENST00000504512 DNAJC10Q8IXB1 793 aa12.9□□□□□ -0.34
LINC01411-201ENST00000504512 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.89□□□□□ -0.35
LINC01411-201ENST00000504512 KCNQ3O43525 872 aa12.89□□□□□ -0.35
LINC01411-201ENST00000504512 NFE2L2Q16236 605 aa12.89□□□□□ -0.35
LINC01411-201ENST00000504512 TTC5Q8N0Z6 440 aa12.89□□□□□ -0.35
LINC01411-201ENST00000504512 ADAMTS8Q9UP79 889 aa12.89□□□□□ -0.35
LINC01411-201ENST00000504512 RRP7AQ9Y3A4 280 aaKnown RBP12.89□□□□□ -0.35
LINC01411-201ENST00000504512 KDM3BQ7LBC6 1761 aa12.89□□□□□ -0.35
LINC01411-201ENST00000504512 BTBD11A6QL63 1104 aa12.88□□□□□ -0.35
LINC01411-201ENST00000504512 ANP32CO43423 234 aa12.88□□□□□ -0.35
LINC01411-201ENST00000504512 CRKLP46109 303 aaKnown RBP12.88□□□□□ -0.35
LINC01411-201ENST00000504512 ZNF496Q96IT1 587 aaPredicted RBP12.88□□□□□ -0.35
LINC01411-201ENST00000504512 SGIP1Q9BQI5 828 aa12.88□□□□□ -0.35
LINC01411-201ENST00000504512 CNTNAP4Q9C0A0 1308 aa12.88□□□□□ -0.35
LINC01411-201ENST00000504512 NEUROD2Q15784 382 aa12.87□□□□□ -0.35
LINC01411-201ENST00000504512 ZNF790Q6PG37 636 aa12.87□□□□□ -0.35
LINC01411-201ENST00000504512 PNNQ9H307 717 aaKnown RBP12.87□□□□□ -0.35
LINC01411-201ENST00000504512 MIS18AQ9NYP9 233 aa12.87□□□□□ -0.35
LINC01411-201ENST00000504512 SENP3-EIF4A1A0A087X0R7 540 aa12.86□□□□□ -0.35
LINC01411-201ENST00000504512 SSFA2P28290 1259 aa12.86□□□□□ -0.35
LINC01411-201ENST00000504512 RIPK4P57078 832 aa12.86□□□□□ -0.35
LINC01411-201ENST00000504512 KLHL34Q8N239 644 aa12.86□□□□□ -0.35
LINC01411-201ENST00000504512 RTCBQ9Y3I0 505 aaKnown RBP12.86□□□□□ -0.35
LINC01411-201ENST00000504512 HEG1Q9ULI3 1381 aa12.85□□□□□ -0.35
LINC01411-201ENST00000504512 HTATSF1O43719 755 aaKnown RBP12.85□□□□□ -0.35
LINC01411-201ENST00000504512 TMPOP42166 694 aaKnown RBP12.85□□□□□ -0.35
LINC01411-201ENST00000504512 SLC16A10Q8TF71 515 aa12.85□□□□□ -0.35
LINC01411-201ENST00000504512 LAMB4A4D0S4 1761 aa12.84□□□□□ -0.35
LINC01411-201ENST00000504512 PRAMEF22A3QJZ6 481 aa12.84□□□□□ -0.35
LINC01411-201ENST00000504512 CYP19A1P11511 503 aaPredicted RBP12.84□□□□□ -0.35
LINC01411-201ENST00000504512 HMGB2P26583 209 aaKnown RBP12.84□□□□□ -0.35
LINC01411-201ENST00000504512 POLD1P28340 1107 aa12.84□□□□□ -0.35
LINC01411-201ENST00000504512 RC3H1Q5TC82 1133 aaKnown RBP12.84□□□□□ -0.35
LINC01411-201ENST00000504512 INTS5Q6P9B9 1019 aaKnown RBP12.84□□□□□ -0.35
LINC01411-201ENST00000504512 FLAD1Q8NFF5 587 aa12.84□□□□□ -0.35
LINC01411-201ENST00000504512 RUNDC1Q96C34 613 aa12.84□□□□□ -0.35
LINC01411-201ENST00000504512 FMNL2Q96PY5 1086 aa12.84□□□□□ -0.35
LINC01411-201ENST00000504512 ARXQ96QS3 562 aa12.84□□□□□ -0.35
LINC01411-201ENST00000504512 MRS2Q9HD23 443 aa12.84□□□□□ -0.35
LINC01411-201ENST00000504512 CCDC87Q9NVE4 849 aa12.84□□□□□ -0.35
LINC01411-201ENST00000504512 ZBTB1Q9Y2K1 713 aa12.84□□□□□ -0.35
LINC01411-201ENST00000504512 RPS6KA4O75676 772 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms