RNA–Protein interactions for RNA: ENST00000504396.1

DHFR-202, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,447 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-202ENST00000504396 SBNO2Q9Y2G9 1366 aa12.88□□□□□ -0.35
DHFR-202ENST00000504396 ARXQ96QS3 562 aa12.88□□□□□ -0.35
DHFR-202ENST00000504396 SIN3AQ96ST3 1273 aa12.88□□□□□ -0.35
DHFR-202ENST00000504396 CHD4Q14839 1912 aa12.88□□□□□ -0.35
DHFR-202ENST00000504396 KAT6BQ8WYB5 2073 aa12.88□□□□□ -0.35
DHFR-202ENST00000504396 NME9Q86XW9 330 aa12.88□□□□□ -0.35
DHFR-202ENST00000504396 ANKRD24Q8TF21 1146 aa12.88□□□□□ -0.35
DHFR-202ENST00000504396 PAPPAQ13219 1627 aa12.88□□□□□ -0.35
DHFR-202ENST00000504396 SENP3-EIF4A1A0A087X0R7 540 aa12.87□□□□□ -0.35
DHFR-202ENST00000504396 HDGFL2Q7Z4V5 671 aaPredicted RBP12.87□□□□□ -0.35
DHFR-202ENST00000504396 TMEM121BQ9BXQ6 578 aaPredicted RBP12.87□□□□□ -0.35
DHFR-202ENST00000504396 USP31Q70CQ4 1352 aa12.86□□□□□ -0.35
DHFR-202ENST00000504396 GPR162Q16538 588 aa12.86□□□□□ -0.35
DHFR-202ENST00000504396 ZNF827Q17R98 1081 aa12.86□□□□□ -0.35
DHFR-202ENST00000504396 MICALL2Q8IY33 904 aa12.86□□□□□ -0.35
DHFR-202ENST00000504396 DDX54Q8TDD1 881 aaKnown RBP12.85□□□□□ -0.35
DHFR-202ENST00000504396 SYTL4Q96C24 671 aaPredicted RBP12.85□□□□□ -0.35
DHFR-202ENST00000504396 LTV1Q96GA3 475 aaPredicted RBP12.85□□□□□ -0.35
DHFR-202ENST00000504396 POLD1P28340 1107 aa12.84□□□□□ -0.35
DHFR-202ENST00000504396 CARD11Q9BXL7 1154 aa12.83□□□□□ -0.36
DHFR-202ENST00000504396 FAM208AQ9UK61 1670 aaKnown RBP12.82□□□□□ -0.36
DHFR-202ENST00000504396 LRRC4BQ9NT99 713 aa12.82□□□□□ -0.36
DHFR-202ENST00000504396 TFCP2L1Q9NZI6 479 aa12.82□□□□□ -0.36
DHFR-202ENST00000504396 EDC4Q6P2E9 1401 aaKnown RBP12.82□□□□□ -0.36
DHFR-202ENST00000504396 DOT1LQ8TEK3 1739 aa12.82□□□□□ -0.36
DHFR-202ENST00000504396 CD163L1Q9NR16 1453 aa12.82□□□□□ -0.36
DHFR-202ENST00000504396 NKX1-1Q15270 411 aaPredicted RBP12.81□□□□□ -0.36
DHFR-202ENST00000504396 TERF2IPQ9NYB0 399 aa12.81□□□□□ -0.36
DHFR-202ENST00000504396 MAP3K5Q99683 1374 aa12.81□□□□□ -0.36
DHFR-202ENST00000504396 KCNQ4P56696 695 aa12.8□□□□□ -0.36
DHFR-202ENST00000504396 C1QTNF8P60827 252 aa12.8□□□□□ -0.36
DHFR-202ENST00000504396 FAM163AQ96GL9 167 aaPredicted RBP12.8□□□□□ -0.36
DHFR-202ENST00000504396 PUS7Q96PZ0 661 aaKnown RBP12.8□□□□□ -0.36
DHFR-202ENST00000504396 SLC12A5Q9H2X9 1139 aa12.8□□□□□ -0.36
DHFR-202ENST00000504396 A0A1W2PP64 1363 aa12.8□□□□□ -0.36
DHFR-202ENST00000504396 QSER1Q2KHR3 1735 aa12.8□□□□□ -0.36
DHFR-202ENST00000504396 TUBGCP6Q96RT7 1819 aa12.8□□□□□ -0.36
DHFR-202ENST00000504396 SLC27A3Q5K4L6 730 aa12.79□□□□□ -0.36
DHFR-202ENST00000504396 UTRNP46939 3433 aa12.79□□□□□ -0.36
DHFR-202ENST00000504396 GIGYF1O75420 1035 aaPredicted RBP12.79□□□□□ -0.36
DHFR-202ENST00000504396 AMPHP49418 695 aa12.78□□□□□ -0.36
DHFR-202ENST00000504396 PRIM1P49642 420 aaKnown RBP12.78□□□□□ -0.36
DHFR-202ENST00000504396 PNPLA7Q6ZV29 1317 aa12.78□□□□□ -0.36
DHFR-202ENST00000504396 SLC16A10Q8TF71 515 aa12.78□□□□□ -0.36
DHFR-202ENST00000504396 ANKRD36BQ8N2N9 1353 aa12.77□□□□□ -0.37
DHFR-202ENST00000504396 PPP1R37O75864 691 aa12.77□□□□□ -0.37
DHFR-202ENST00000504396 IP6K1Q92551 441 aa12.77□□□□□ -0.37
DHFR-202ENST00000504396 COG3Q96JB2 828 aa12.77□□□□□ -0.37
DHFR-202ENST00000504396 RGPD2P0DJD1 1756 aa12.76□□□□□ -0.37
DHFR-202ENST00000504396 SLC24A1O60721 1099 aa12.76□□□□□ -0.37
DHFR-202ENST00000504396 NLGN2Q8NFZ4 835 aa12.76□□□□□ -0.37
DHFR-202ENST00000504396 CCNL1Q9UK58 526 aaPredicted RBP12.76□□□□□ -0.37
DHFR-202ENST00000504396 LY75O60449 1722 aa12.76□□□□□ -0.37
DHFR-202ENST00000504396 COL24A1Q17RW2 1714 aa12.76□□□□□ -0.37
DHFR-202ENST00000504396 TONSLQ96HA7 1378 aa12.75□□□□□ -0.37
DHFR-202ENST00000504396 LCE2DQ5TA82 110 aaPredicted RBP12.75□□□□□ -0.37
DHFR-202ENST00000504396 TMEM92Q6UXU6 159 aa12.75□□□□□ -0.37
DHFR-202ENST00000504396 SHANK3Q9BYB0 1731 aa12.74□□□□□ -0.37
DHFR-202ENST00000504396 USP47Q96K76 1375 aa12.74□□□□□ -0.37
DHFR-202ENST00000504396 MAP3K19Q56UN5 1328 aa12.74□□□□□ -0.37
DHFR-202ENST00000504396 HOXC9P31274 260 aa12.74□□□□□ -0.37
DHFR-202ENST00000504396 ZCRB1Q8TBF4 217 aaKnown RBP12.74□□□□□ -0.37
DHFR-202ENST00000504396 MEGF6O75095 1541 aa12.74□□□□□ -0.37
DHFR-202ENST00000504396 MSL1Q68DK7 614 aa12.73□□□□□ -0.37
DHFR-202ENST00000504396 SMG6Q86US8 1419 aaKnown RBP12.73□□□□□ -0.37
DHFR-202ENST00000504396 FBLN1P23142 703 aa12.72□□□□□ -0.37
DHFR-202ENST00000504396 NSD2O96028 1365 aa12.72□□□□□ -0.37
DHFR-202ENST00000504396 C5P01031 1676 aa12.72□□□□□ -0.37
DHFR-202ENST00000504396 USHBP1Q8N6Y0 703 aa12.71□□□□□ -0.37
DHFR-202ENST00000504396 GRIN3BO60391 1043 aa12.71□□□□□ -0.38
DHFR-202ENST00000504396 HMGB2P26583 209 aaKnown RBP12.71□□□□□ -0.38
DHFR-202ENST00000504396 RRS1Q15050 365 aaKnown RBP12.71□□□□□ -0.38
DHFR-202ENST00000504396 RAPGEF4Q8WZA2 1011 aa12.71□□□□□ -0.38
DHFR-202ENST00000504396 SNPHO15079 494 aa12.7□□□□□ -0.38
DHFR-202ENST00000504396 YBX3P16989 372 aaKnown RBP eCLIP12.7□□□□□ -0.387e-10■□□□□ 10
DHFR-202ENST00000504396 COL23A1Q86Y22 540 aaPredicted RBP12.7□□□□□ -0.38
DHFR-202ENST00000504396 RTL1A6NKG5 1358 aa12.69□□□□□ -0.38
DHFR-202ENST00000504396 CGNL1Q0VF96 1302 aa12.68□□□□□ -0.38
DHFR-202ENST00000504396 ST20-MTHFSA0A0A6YYL1 179 aa12.68□□□□□ -0.38
DHFR-202ENST00000504396 ST18O60284 1047 aa12.68□□□□□ -0.38
DHFR-202ENST00000504396 TATP17735 454 aaPredicted RBP12.68□□□□□ -0.38
DHFR-202ENST00000504396 NBPF6Q5VWK0 638 aa12.68□□□□□ -0.38
DHFR-202ENST00000504396 NBPF4Q96M43 638 aa12.68□□□□□ -0.38
DHFR-202ENST00000504396 GGNBP2Q9H3C7 697 aa12.68□□□□□ -0.38
DHFR-202ENST00000504396 PCDH11XQ9BZA7 1347 aa12.67□□□□□ -0.38
DHFR-202ENST00000504396 PCDH11YQ9BZA8 1340 aa12.67□□□□□ -0.38
DHFR-202ENST00000504396 MPRIPQ6WCQ1 1025 aa12.67□□□□□ -0.38
DHFR-202ENST00000504396 ZNF526Q8TF50 670 aaPredicted RBP12.67□□□□□ -0.38
DHFR-202ENST00000504396 PALLDQ8WX93 1383 aa12.67□□□□□ -0.38
DHFR-202ENST00000504396 GOLGB1Q14789 3259 aaKnown RBP12.67□□□□□ -0.38
DHFR-202ENST00000504396 ATP10DQ9P241 1426 aa12.66□□□□□ -0.38
DHFR-202ENST00000504396 KIF20BQ96Q89 1820 aa12.66□□□□□ -0.38
DHFR-202ENST00000504396 AK7Q96M32 723 aa12.66□□□□□ -0.38
DHFR-202ENST00000504396 WWC3Q9ULE0 1092 aa12.66□□□□□ -0.38
DHFR-202ENST00000504396 TAF1LQ8IZX4 1826 aa12.65□□□□□ -0.38
DHFR-202ENST00000504396 POTEMA6NI47 508 aa12.65□□□□□ -0.38
DHFR-202ENST00000504396 PHF14O94880 888 aa12.65□□□□□ -0.38
DHFR-202ENST00000504396 TESK2Q96S53 571 aa12.65□□□□□ -0.38
DHFR-202ENST00000504396 GPBP1L1Q9HC44 474 aaPredicted RBP12.65□□□□□ -0.38
DHFR-202ENST00000504396 RYDENQ9NUL5 291 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 1262 ms