RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 N4BP2Q86UW6 1770 aaPredicted RBP12.26□□□□□ -0.45
COL1A1-210ENST00000504289 RNMTO43148 476 aaKnown RBP12.26□□□□□ -0.45
COL1A1-210ENST00000504289 EIF4A1P60842 406 aaKnown RBP12.26□□□□□ -0.45
COL1A1-210ENST00000504289 FLIIQ13045 1269 aa12.26□□□□□ -0.45
COL1A1-210ENST00000504289 LMOD2Q6P5Q4 547 aa12.26□□□□□ -0.45
COL1A1-210ENST00000504289 SIRT2Q8IXJ6 389 aa12.26□□□□□ -0.45
COL1A1-210ENST00000504289 MIS18AQ9NYP9 233 aa12.26□□□□□ -0.45
COL1A1-210ENST00000504289 COL18A1P39060 1754 aa12.25□□□□□ -0.45
COL1A1-210ENST00000504289 XPCQ01831 940 aaPredicted RBP12.25□□□□□ -0.45
COL1A1-210ENST00000504289 USHBP1Q8N6Y0 703 aa12.25□□□□□ -0.45
COL1A1-210ENST00000504289 RAPGEF4Q8WZA2 1011 aa12.25□□□□□ -0.45
COL1A1-210ENST00000504289 DAXXQ9UER7 740 aaPredicted RBP12.25□□□□□ -0.45
COL1A1-210ENST00000504289 SPG7Q9UQ90 795 aa12.25□□□□□ -0.45
COL1A1-210ENST00000504289 IBTKQ9P2D0 1353 aaPredicted RBP12.25□□□□□ -0.45
COL1A1-210ENST00000504289 HEG1Q9ULI3 1381 aa12.25□□□□□ -0.45
COL1A1-210ENST00000504289 ATP10DQ9P241 1426 aa12.25□□□□□ -0.45
COL1A1-210ENST00000504289 RGPD2P0DJD1 1756 aa12.24□□□□□ -0.45
COL1A1-210ENST00000504289 HDGFL1Q5TGJ6 251 aa12.24□□□□□ -0.45
COL1A1-210ENST00000504289 CEP85Q6P2H3 762 aa12.24□□□□□ -0.45
COL1A1-210ENST00000504289 XIRP1Q702N8 1843 aaKnown RBP12.24□□□□□ -0.45
COL1A1-210ENST00000504289 LRRC59Q96AG4 307 aaKnown RBP12.24□□□□□ -0.45
COL1A1-210ENST00000504289 HDAC5Q9UQL6 1122 aa12.24□□□□□ -0.45
COL1A1-210ENST00000504289 AXIN2Q9Y2T1 843 aa12.24□□□□□ -0.45
COL1A1-210ENST00000504289 CRYBG1Q9Y4K1 1723 aa12.23□□□□□ -0.45
COL1A1-210ENST00000504289 SOS2Q07890 1332 aaPredicted RBP12.23□□□□□ -0.45
COL1A1-210ENST00000504289 BTBD11A6QL63 1104 aa12.23□□□□□ -0.45
COL1A1-210ENST00000504289 GNAI2P04899 355 aa12.23□□□□□ -0.45
COL1A1-210ENST00000504289 HSP90AB1P08238 724 aaKnown RBP12.23□□□□□ -0.45
COL1A1-210ENST00000504289 TATP17735 454 aaPredicted RBP12.23□□□□□ -0.45
COL1A1-210ENST00000504289 BECN1Q14457 450 aa12.23□□□□□ -0.45
COL1A1-210ENST00000504289 ANKRD45Q5TZF3 282 aa12.23□□□□□ -0.45
COL1A1-210ENST00000504289 TBC1D32Q96NH3 1257 aa12.23□□□□□ -0.45
COL1A1-210ENST00000504289 ZBTB7CA1YPR0 619 aa12.22□□□□□ -0.45
COL1A1-210ENST00000504289 FKBP5Q13451 457 aaPredicted RBP12.22□□□□□ -0.45
COL1A1-210ENST00000504289 BRINP3Q76B58 766 aa12.22□□□□□ -0.45
COL1A1-210ENST00000504289 LGR6Q9HBX8 967 aa12.22□□□□□ -0.45
COL1A1-210ENST00000504289 G2E3Q7L622 706 aa12.21□□□□□ -0.45
COL1A1-210ENST00000504289 LNPKQ9C0E8 428 aa12.21□□□□□ -0.45
COL1A1-210ENST00000504289 SLAIN2Q9P270 581 aa12.21□□□□□ -0.45
COL1A1-210ENST00000504289 USP35Q9P2H5 1018 aa12.21□□□□□ -0.45
COL1A1-210ENST00000504289 DBF4Q9UBU7 674 aaPredicted RBP12.21□□□□□ -0.45
COL1A1-210ENST00000504289 SIPA1L3O60292 1781 aaPredicted RBP12.2□□□□□ -0.46
COL1A1-210ENST00000504289 ZC3H6P61129 1189 aaKnown RBP12.2□□□□□ -0.46
COL1A1-210ENST00000504289 IFNL2Q8IZJ0 200 aa12.2□□□□□ -0.46
COL1A1-210ENST00000504289 MEIS3Q99687 375 aa12.2□□□□□ -0.46
COL1A1-210ENST00000504289 MPRIPQ6WCQ1 1025 aa12.19□□□□□ -0.46
COL1A1-210ENST00000504289 DCAF5Q96JK2 942 aa12.19□□□□□ -0.46
COL1A1-210ENST00000504289 C1orf115Q9H7X2 142 aa12.19□□□□□ -0.46
COL1A1-210ENST00000504289 NLRP2Q9NX02 1062 aa12.19□□□□□ -0.46
COL1A1-210ENST00000504289 HYPKQ9NX55 129 aa12.19□□□□□ -0.46
COL1A1-210ENST00000504289 RGPD5Q99666 1765 aa12.19□□□□□ -0.46
COL1A1-210ENST00000504289 MRC1P22897 1456 aa12.19□□□□□ -0.46
COL1A1-210ENST00000504289 PKD1L3Q7Z443 1732 aa12.18□□□□□ -0.46
COL1A1-210ENST00000504289 GIGYF1O75420 1035 aaPredicted RBP12.18□□□□□ -0.46
COL1A1-210ENST00000504289 ALDH1L1O75891 902 aa12.18□□□□□ -0.46
COL1A1-210ENST00000504289 PHKG2P15735 406 aa12.18□□□□□ -0.46
COL1A1-210ENST00000504289 ATP8B2P98198 1209 aa12.18□□□□□ -0.46
COL1A1-210ENST00000504289 SLC4A10Q6U841 1118 aa12.18□□□□□ -0.46
COL1A1-210ENST00000504289 SRCIN1Q9C0H9 1055 aa12.18□□□□□ -0.46
COL1A1-210ENST00000504289 OSBPL3Q9H4L5 887 aa12.18□□□□□ -0.46
COL1A1-210ENST00000504289 SCN11AQ9UI33 1791 aa12.18□□□□□ -0.46
COL1A1-210ENST00000504289 SEC24BO95487 1268 aa12.17□□□□□ -0.46
COL1A1-210ENST00000504289 RBM25P49756 843 aaKnown RBP12.17□□□□□ -0.46
COL1A1-210ENST00000504289 PLEKHM2Q8IWE5 1019 aa12.17□□□□□ -0.46
COL1A1-210ENST00000504289 SLC52A2Q9HAB3 445 aa12.17□□□□□ -0.46
COL1A1-210ENST00000504289 WDR17Q8IZU2 1322 aa12.16□□□□□ -0.46
COL1A1-210ENST00000504289 F6X3S4 739 aa12.16□□□□□ -0.46
COL1A1-210ENST00000504289 CDC45O75419 566 aa12.16□□□□□ -0.46
COL1A1-210ENST00000504289 UBTFL1P0CB47 393 aaPredicted RBP12.16□□□□□ -0.46
COL1A1-210ENST00000504289 CSB-PGBD3P0DP91 1061 aa12.16□□□□□ -0.46
COL1A1-210ENST00000504289 DNAAF4Q8WXU2 420 aa12.16□□□□□ -0.46
COL1A1-210ENST00000504289 C22orf23Q9BZE7 217 aa12.16□□□□□ -0.46
COL1A1-210ENST00000504289 USP44Q9H0E7 712 aa12.16□□□□□ -0.46
COL1A1-210ENST00000504289 DDX21Q9NR30 783 aaKnown RBP eCLIP12.16□□□□□ -0.46
COL1A1-210ENST00000504289 PARP4Q9UKK3 1724 aaKnown RBP12.16□□□□□ -0.46
COL1A1-210ENST00000504289 RAB11FIP3O75154 756 aa12.15□□□□□ -0.46
COL1A1-210ENST00000504289 DDX58O95786 925 aaKnown RBP12.15□□□□□ -0.46
COL1A1-210ENST00000504289 AOX1Q06278 1338 aa12.14□□□□□ -0.47
COL1A1-210ENST00000504289 ZNF335Q9H4Z2 1342 aaPredicted RBP12.14□□□□□ -0.47
COL1A1-210ENST00000504289 HSP90AB4PQ58FF6 505 aa12.14□□□□□ -0.47
COL1A1-210ENST00000504289 BEND3Q5T5X7 828 aa12.14□□□□□ -0.47
COL1A1-210ENST00000504289 TTC22Q5TAA0 569 aa12.14□□□□□ -0.47
COL1A1-210ENST00000504289 ZNF790Q6PG37 636 aa12.14□□□□□ -0.47
COL1A1-210ENST00000504289 KSR2Q6VAB6 950 aa12.14□□□□□ -0.47
COL1A1-210ENST00000504289 IL27Q8NEV9 243 aa12.14□□□□□ -0.47
COL1A1-210ENST00000504289 SSH3Q8TE77 659 aa12.14□□□□□ -0.47
COL1A1-210ENST00000504289 CARD10Q9BWT7 1032 aa12.14□□□□□ -0.47
COL1A1-210ENST00000504289 CHPF2Q9P2E5 772 aa12.14□□□□□ -0.47
COL1A1-210ENST00000504289 MEGF6O75095 1541 aa12.14□□□□□ -0.47
COL1A1-210ENST00000504289 NHSL1Q5SYE7 1610 aa12.14□□□□□ -0.47
COL1A1-210ENST00000504289 ERBB4Q15303 1308 aa12.13□□□□□ -0.47
COL1A1-210ENST00000504289 KDM6AO15550 1401 aaPredicted RBP12.13□□□□□ -0.47
COL1A1-210ENST00000504289 ERVV-2B6SEH9 535 aa12.13□□□□□ -0.47
COL1A1-210ENST00000504289 EIF2S2P20042 333 aaKnown RBP12.13□□□□□ -0.47
COL1A1-210ENST00000504289 MTX1Q13505 466 aa12.13□□□□□ -0.47
COL1A1-210ENST00000504289 NKX1-1Q15270 411 aaPredicted RBP12.13□□□□□ -0.47
COL1A1-210ENST00000504289 CASC1Q6TDU7 716 aa12.13□□□□□ -0.47
COL1A1-210ENST00000504289 DDX17Q92841 729 aaKnown RBP12.13□□□□□ -0.47
COL1A1-210ENST00000504289 PHAXQ9H814 394 aaKnown RBP12.13□□□□□ -0.47
COL1A1-210ENST00000504289 PRDM11Q9NQV5 511 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms