RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 AK9Q5TCS8 1911 aa4.48□□□□□ -1.69
PCDH11X-208ENST00000504220 NKTRP30414 1462 aaKnown RBP4.48□□□□□ -1.69
PCDH11X-208ENST00000504220 RAD51AP2Q09MP3 1159 aa4.48□□□□□ -1.69
PCDH11X-208ENST00000504220 TERF2Q15554 542 aa4.48□□□□□ -1.69
PCDH11X-208ENST00000504220 ZNF526Q8TF50 670 aaPredicted RBP4.48□□□□□ -1.69
PCDH11X-208ENST00000504220 L3MBTL2Q969R5 705 aa4.48□□□□□ -1.69
PCDH11X-208ENST00000504220 IRX2Q9BZI1 471 aaPredicted RBP4.48□□□□□ -1.69
PCDH11X-208ENST00000504220 NPHP4O75161 1426 aaPredicted RBP4.48□□□□□ -1.69
PCDH11X-208ENST00000504220 KDM2BQ8NHM5 1336 aa4.47□□□□□ -1.69
PCDH11X-208ENST00000504220 SRPK2P78362 688 aaKnown RBP4.47□□□□□ -1.69
PCDH11X-208ENST00000504220 CHAF1AQ13111 956 aaPredicted RBP4.47□□□□□ -1.69
PCDH11X-208ENST00000504220 KCNV2Q8TDN2 545 aa4.47□□□□□ -1.69
PCDH11X-208ENST00000504220 SUFUQ9UMX1 484 aa4.47□□□□□ -1.69
PCDH11X-208ENST00000504220 MYCBPQ99417 103 aaPredicted RBP4.47□□□□□ -1.69
PCDH11X-208ENST00000504220 MTERF4Q7Z6M4 381 aaKnown RBP4.47□□□□□ -1.69
PCDH11X-208ENST00000504220 ERBB3P21860 1342 aa4.47□□□□□ -1.69
PCDH11X-208ENST00000504220 GOLGA6CA6NDK9 693 aa4.46□□□□□ -1.69
PCDH11X-208ENST00000504220 GOLGA6BA6NDN3 693 aa4.46□□□□□ -1.69
PCDH11X-208ENST00000504220 GOLGA6DP0CG33 693 aa4.46□□□□□ -1.69
PCDH11X-208ENST00000504220 TMF1P82094 1093 aa4.46□□□□□ -1.69
PCDH11X-208ENST00000504220 ARPC5LQ9BPX5 153 aa4.46□□□□□ -1.69
PCDH11X-208ENST00000504220 GOLGA6AQ9NYA3 693 aa4.46□□□□□ -1.69
PCDH11X-208ENST00000504220 SUN2Q9UH99 717 aa4.46□□□□□ -1.69
PCDH11X-208ENST00000504220 NOL7Q9UMY1 257 aaKnown RBP4.46□□□□□ -1.69
PCDH11X-208ENST00000504220 ZBTB12Q9Y330 459 aaPredicted RBP4.46□□□□□ -1.69
PCDH11X-208ENST00000504220 ZNF330Q9Y3S2 320 aaPredicted RBP4.46□□□□□ -1.69
PCDH11X-208ENST00000504220 LRRC7Q96NW7 1537 aa4.46□□□□□ -1.7
PCDH11X-208ENST00000504220 TMEM2Q9UHN6 1383 aa4.46□□□□□ -1.7
PCDH11X-208ENST00000504220 CTIFO43310 598 aaKnown RBP4.46□□□□□ -1.7
PCDH11X-208ENST00000504220 HSPA2P54652 639 aa4.46□□□□□ -1.7
PCDH11X-208ENST00000504220 PIAS4Q8N2W9 510 aaPredicted RBP4.46□□□□□ -1.7
PCDH11X-208ENST00000504220 MYRIPQ8NFW9 859 aa4.46□□□□□ -1.7
PCDH11X-208ENST00000504220 GRPEL1Q9HAV7 217 aa4.46□□□□□ -1.7
PCDH11X-208ENST00000504220 NRXN1Q9ULB1 1477 aa4.46□□□□□ -1.7
PCDH11X-208ENST00000504220 MS4A1P11836 297 aa4.46□□□□□ -1.7
PCDH11X-208ENST00000504220 KIAA2012Q0VF49 1180 aa4.46□□□□□ -1.7
PCDH11X-208ENST00000504220 ICE2Q659A1 982 aa4.46□□□□□ -1.7
PCDH11X-208ENST00000504220 ARMCX6Q7L4S7 300 aa4.46□□□□□ -1.7
PCDH11X-208ENST00000504220 NPC1L1Q9UHC9 1359 aa4.46□□□□□ -1.7
PCDH11X-208ENST00000504220 ECEL1O95672 775 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 SLC4A10Q6U841 1118 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 RBM33Q96EV2 1170 aaKnown RBP4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 COG6Q9Y2V7 657 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 IBTKQ9P2D0 1353 aaPredicted RBP4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 PLEKHG1Q9ULL1 1385 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 KIAA1210Q9ULL0 1709 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 TBC1D8BQ0IIM8 1120 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 CREBRFQ8IUR6 639 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 PROCA1Q8NCQ7 364 aaPredicted RBP4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 PRIMPOLQ96LW4 560 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 GBP4Q96PP9 640 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 MMTAG2Q9BU76 263 aaKnown RBP4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 CHMP3Q9Y3E7 222 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 NALCNQ8IZF0 1738 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 SPDYE4A6NLX3 237 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 PPP1R12AO14974 1030 aaPredicted RBP4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 PPFIA4O75335 1185 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 U2AF2P26368 475 aaKnown RBP eCLIP4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 HSP90AB4PQ58FF6 505 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 SPTY2D1Q68D10 685 aaPredicted RBP4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 MTHFD1LQ6UB35 978 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 PACS2Q86VP3 889 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 CACTIN-AS1Q8N1I8 211 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 KCNB2Q92953 911 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 CRBNQ96SW2 442 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 CXorf56Q9H5V9 222 aa4.45□□□□□ -1.7
PCDH11X-208ENST00000504220 TRIM66O15016 1216 aa4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 TNNT3P45378 269 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 AGAP3Q96P47 875 aa4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 SLC26A8Q96RN1 970 aa4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 CTNNA3Q9UI47 895 aa4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 ISY1Q9ULR0 285 aaKnown RBP4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 EID1Q9Y6B2 187 aa4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 NHSL1Q5SYE7 1610 aa4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 ADAMTS13Q76LX8 1427 aa4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 ABL1P00519 1130 aa4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 TMEM132EQ6IEE7 984 aa4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 ZSCAN30Q86W11 494 aa4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 RANBP17Q9H2T7 1088 aaKnown RBP4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 DDX49Q9Y6V7 483 aaKnown RBP4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 MORC2Q9Y6X9 1032 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 PIK3R4Q99570 1358 aa4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 GOLGA2Q08379 1002 aa4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 SETDB1Q15047 1291 aa4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 NOL10Q9BSC4 688 aaKnown RBP4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 TEX13AQ9BXU3 409 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 RWDD1Q9H446 243 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 TRAK1Q9UPV9 953 aa4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 R3HCC1Q9Y3T6 440 aaKnown RBP4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 NINLQ9Y2I6 1382 aa4.44□□□□□ -1.7
PCDH11X-208ENST00000504220 ST20-MTHFSA0A0A6YYL1 179 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 FAM177BA6PVY3 158 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 NRDCO43847 1150 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 TXNDC2Q86VQ3 553 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 TMX1Q9H3N1 280 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 PICK1Q9NRD5 415 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 MYOM2P54296 1465 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 SPATA31E1Q6ZUB1 1445 aa4.43□□□□□ -1.7
PCDH11X-208ENST00000504220 ZNF853P0CG23 659 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms