RNA–Protein interactions for RNA: ENST00000503315.5

PTCD2-206, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2

Gene PTCD2, Length 1,440 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-206ENST00000503315 RDH13Q8NBN7 331 aa10.27□□□□□ -0.77
PTCD2-206ENST00000503315 NKTRP30414 1462 aaKnown RBP10.27□□□□□ -0.77
PTCD2-206ENST00000503315 ROBO1Q9Y6N7 1651 aa10.26□□□□□ -0.77
PTCD2-206ENST00000503315 ST18O60284 1047 aa10.26□□□□□ -0.77
PTCD2-206ENST00000503315 DNAJB2P25686 324 aa10.26□□□□□ -0.77
PTCD2-206ENST00000503315 ZNF326Q5BKZ1 582 aaKnown RBP10.26□□□□□ -0.77
PTCD2-206ENST00000503315 DNAJC14Q6Y2X3 702 aaPredicted RBP10.26□□□□□ -0.77
PTCD2-206ENST00000503315 ADAMTS13Q76LX8 1427 aa10.26□□□□□ -0.77
PTCD2-206ENST00000503315 FDX1P10109 184 aa10.25□□□□□ -0.77
PTCD2-206ENST00000503315 TMEM164Q5U3C3 297 aa10.25□□□□□ -0.77
PTCD2-206ENST00000503315 ZDHHC16Q969W1 377 aa10.25□□□□□ -0.77
PTCD2-206ENST00000503315 KIF1BO60333 1816 aa10.25□□□□□ -0.77
PTCD2-206ENST00000503315 NAIPQ13075 1403 aa10.25□□□□□ -0.77
PTCD2-206ENST00000503315 GPR37L1O60883 481 aa10.24□□□□□ -0.77
PTCD2-206ENST00000503315 SEC24BO95487 1268 aa10.24□□□□□ -0.77
PTCD2-206ENST00000503315 GIPC2Q8TF65 315 aa10.24□□□□□ -0.77
PTCD2-206ENST00000503315 NOVA2Q9UNW9 492 aaKnown RBP10.24□□□□□ -0.77
PTCD2-206ENST00000503315 DIP2AQ14689 1571 aa10.24□□□□□ -0.77
PTCD2-206ENST00000503315 NCOA3Q9Y6Q9 1424 aa10.24□□□□□ -0.77
PTCD2-206ENST00000503315 MSH6P52701 1360 aa10.24□□□□□ -0.77
PTCD2-206ENST00000503315 PIK3R4Q99570 1358 aa10.24□□□□□ -0.77
PTCD2-206ENST00000503315 MARSP56192 900 aaKnown RBP10.24□□□□□ -0.77
PTCD2-206ENST00000503315 SREK1Q8WXA9 508 aaKnown RBP10.24□□□□□ -0.77
PTCD2-206ENST00000503315 C8orf37Q96NL8 207 aa10.24□□□□□ -0.77
PTCD2-206ENST00000503315 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.23□□□□□ -0.77
PTCD2-206ENST00000503315 NRXN3Q9Y4C0 1643 aa10.23□□□□□ -0.77
PTCD2-206ENST00000503315 FOSBP53539 338 aa10.23□□□□□ -0.77
PTCD2-206ENST00000503315 MTMR2Q13614 643 aa10.23□□□□□ -0.77
PTCD2-206ENST00000503315 SLAIN2Q9P270 581 aa10.23□□□□□ -0.77
PTCD2-206ENST00000503315 CLTCL1P53675 1640 aa10.22□□□□□ -0.77
PTCD2-206ENST00000503315 EIF5BO60841 1220 aaKnown RBP10.22□□□□□ -0.77
PTCD2-206ENST00000503315 ZNF454Q8N9F8 522 aa10.22□□□□□ -0.77
PTCD2-206ENST00000503315 LRRN4Q8WUT4 740 aa10.22□□□□□ -0.77
PTCD2-206ENST00000503315 BIN2Q9UBW5 565 aaPredicted RBP10.22□□□□□ -0.77
PTCD2-206ENST00000503315 TRPM2O94759 1503 aa10.21□□□□□ -0.77
PTCD2-206ENST00000503315 PHLPP1O60346 1717 aa10.21□□□□□ -0.77
PTCD2-206ENST00000503315 SOWAHDA6NJG2 315 aa10.21□□□□□ -0.78
PTCD2-206ENST00000503315 PPM1GO15355 546 aaPredicted RBP10.21□□□□□ -0.78
PTCD2-206ENST00000503315 STK32AQ8WU08 396 aa10.21□□□□□ -0.78
PTCD2-206ENST00000503315 EYA1Q99502 592 aa10.21□□□□□ -0.78
PTCD2-206ENST00000503315 PCDHGA4Q9Y5G9 962 aa10.21□□□□□ -0.78
PTCD2-206ENST00000503315 PTPRUQ92729 1446 aa10.21□□□□□ -0.78
PTCD2-206ENST00000503315 SETBP1Q9Y6X0 1596 aa10.21□□□□□ -0.78
PTCD2-206ENST00000503315 HOXA2O43364 376 aa10.2□□□□□ -0.78
PTCD2-206ENST00000503315 C19orf44Q9H6X5 657 aa10.2□□□□□ -0.78
PTCD2-206ENST00000503315 RGS17Q9UGC6 210 aaPredicted RBP10.2□□□□□ -0.78
PTCD2-206ENST00000503315 ZMIZ1Q9ULJ6 1067 aa10.2□□□□□ -0.78
PTCD2-206ENST00000503315 HFM1A2PYH4 1435 aa10.2□□□□□ -0.78
PTCD2-206ENST00000503315 NBPF26B4DH59 902 aa10.19□□□□□ -0.78
PTCD2-206ENST00000503315 SSFA2P28290 1259 aa10.19□□□□□ -0.78
PTCD2-206ENST00000503315 C3orf67Q6ZVT6 689 aa10.19□□□□□ -0.78
PTCD2-206ENST00000503315 SLF2Q8IX21 1173 aa10.19□□□□□ -0.78
PTCD2-206ENST00000503315 NEXMIFQ5QGS0 1516 aa10.19□□□□□ -0.78
PTCD2-206ENST00000503315 XRN1Q8IZH2 1706 aaKnown RBP10.18□□□□□ -0.78
PTCD2-206ENST00000503315 TMEM134Q9H6X4 195 aa10.18□□□□□ -0.78
PTCD2-206ENST00000503315 ZC3H6P61129 1189 aaKnown RBP10.17□□□□□ -0.78
PTCD2-206ENST00000503315 NFATC2IPQ8NCF5 419 aa10.17□□□□□ -0.78
PTCD2-206ENST00000503315 TRIM52Q96A61 297 aa10.17□□□□□ -0.78
PTCD2-206ENST00000503315 COLQQ9Y215 455 aaPredicted RBP10.17□□□□□ -0.78
PTCD2-206ENST00000503315 METP08581 1390 aa10.17□□□□□ -0.78
PTCD2-206ENST00000503315 COL16A1Q07092 1604 aaPredicted RBP10.17□□□□□ -0.78
PTCD2-206ENST00000503315 SETD1AO15047 1707 aaKnown RBP10.16□□□□□ -0.78
PTCD2-206ENST00000503315 SF3A1Q15459 793 aaKnown RBP10.16□□□□□ -0.78
PTCD2-206ENST00000503315 PHLDB3Q6NSJ2 640 aa10.16□□□□□ -0.78
PTCD2-206ENST00000503315 PPLO60437 1756 aa10.16□□□□□ -0.78
PTCD2-206ENST00000503315 FAM196BA6NMK8 535 aa10.16□□□□□ -0.78
PTCD2-206ENST00000503315 ATF3P18847 181 aa10.16□□□□□ -0.78
PTCD2-206ENST00000503315 VAMP1P23763 118 aa10.16□□□□□ -0.78
PTCD2-206ENST00000503315 LARP1Q6PKG0 1096 aaKnown RBP10.16□□□□□ -0.78
PTCD2-206ENST00000503315 NUDT18Q6ZVK8 323 aa10.16□□□□□ -0.78
PTCD2-206ENST00000503315 ANKRD33BA6NCL7 494 aa10.15□□□□□ -0.79
PTCD2-206ENST00000503315 USP17L3A6NCW0 530 aa10.15□□□□□ -0.79
PTCD2-206ENST00000503315 USP17L4A6NCW7 530 aa10.15□□□□□ -0.79
PTCD2-206ENST00000503315 NCLP19338 710 aaKnown RBP10.15□□□□□ -0.79
PTCD2-206ENST00000503315 USP17L2Q6R6M4 530 aa10.15□□□□□ -0.79
PTCD2-206ENST00000503315 USP17L1Q7RTZ2 530 aa10.15□□□□□ -0.79
PTCD2-206ENST00000503315 FAM200AQ8TCP9 573 aa10.15□□□□□ -0.79
PTCD2-206ENST00000503315 JCADQ9P266 1359 aa10.14□□□□□ -0.79
PTCD2-206ENST00000503315 C6orf229H3BNL8 230 aa10.14□□□□□ -0.79
PTCD2-206ENST00000503315 SKIP12755 728 aa10.14□□□□□ -0.79
PTCD2-206ENST00000503315 GCGRP47871 477 aa10.14□□□□□ -0.79
PTCD2-206ENST00000503315 EPS8L1Q8TE68 723 aa10.14□□□□□ -0.79
PTCD2-206ENST00000503315 UBXN4Q92575 508 aa10.14□□□□□ -0.79
PTCD2-206ENST00000503315 PNMA3Q9UL41 463 aa10.14□□□□□ -0.79
PTCD2-206ENST00000503315 AHDC1Q5TGY3 1603 aaPredicted RBP10.14□□□□□ -0.79
PTCD2-206ENST00000503315 DCCP43146 1447 aa10.14□□□□□ -0.79
PTCD2-206ENST00000503315 NALCNQ8IZF0 1738 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 USP17L15C9J2P7 530 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 USP17L10C9JJH3 530 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 USP17L13C9JLJ4 530 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 USP17L12C9JPN9 530 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 USP17L11C9JVI0 530 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 USP17L21D6R901 530 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 USP17L18D6R9N7 530 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 USP17L22D6RA61 530 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 USP17L17D6RBQ6 530 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 USP17L19D6RCP7 530 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 USP17L20D6RJB6 530 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 SERPINB4P48594 390 aa10.13□□□□□ -0.79
PTCD2-206ENST00000503315 USP17L24Q0WX57 530 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms