RNA–Protein interactions for RNA: ENST00000503180.5

DDR1-248, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-248ENST00000503180 LOC102724428A0A0B4J2F2 783 aa20.86■□□□□ 0.93
DDR1-248ENST00000503180 SIK1P57059 783 aa20.86■□□□□ 0.93
DDR1-248ENST00000503180 RBM42Q9BTD8 480 aaKnown RBP20.86■□□□□ 0.93
DDR1-248ENST00000503180 RREB1Q92766 1687 aa20.86■□□□□ 0.93
DDR1-248ENST00000503180 PSDA5PKW4 1024 aaPredicted RBP20.85■□□□□ 0.93
DDR1-248ENST00000503180 KCNQ4P56696 695 aa20.85■□□□□ 0.93
DDR1-248ENST00000503180 SLC15A2Q16348 729 aa20.85■□□□□ 0.93
DDR1-248ENST00000503180 ATP6V1AP38606 617 aa20.84■□□□□ 0.93
DDR1-248ENST00000503180 RIPK4P57078 832 aa20.84■□□□□ 0.93
DDR1-248ENST00000503180 CCDC184Q52MB2 194 aa20.84■□□□□ 0.93
DDR1-248ENST00000503180 CCDC146Q8IYE0 955 aa20.84■□□□□ 0.93
DDR1-248ENST00000503180 SCN11AQ9UI33 1791 aa20.84■□□□□ 0.93
DDR1-248ENST00000503180 MCM10Q7L590 875 aa20.83■□□□□ 0.93
DDR1-248ENST00000503180 PTCD1O75127 700 aaKnown RBP20.82■□□□□ 0.92
DDR1-248ENST00000503180 TMPOP42166 694 aaKnown RBP20.82■□□□□ 0.92
DDR1-248ENST00000503180 LMOD3Q0VAK6 560 aa20.82■□□□□ 0.92
DDR1-248ENST00000503180 TTC5Q8N0Z6 440 aa20.82■□□□□ 0.92
DDR1-248ENST00000503180 PNISRQ8TF01 805 aaKnown RBP20.82■□□□□ 0.92
DDR1-248ENST00000503180 CEMIPQ8WUJ3 1361 aa20.82■□□□□ 0.92
DDR1-248ENST00000503180 NUP188Q5SRE5 1749 aa20.81■□□□□ 0.92
DDR1-248ENST00000503180 ANO8Q9HCE9 1232 aaPredicted RBP20.81■□□□□ 0.92
DDR1-248ENST00000503180 TFCP2L1Q9NZI6 479 aa20.81■□□□□ 0.92
DDR1-248ENST00000503180 BTBD11A6QL63 1104 aa20.8■□□□□ 0.92
DDR1-248ENST00000503180 DCTN1Q14203 1278 aa20.8■□□□□ 0.92
DDR1-248ENST00000503180 TAF7Q15545 349 aaPredicted RBP20.8■□□□□ 0.92
DDR1-248ENST00000503180 LY75O60449 1722 aa20.8■□□□□ 0.92
DDR1-248ENST00000503180 SLC39A6Q13433 755 aa20.79■□□□□ 0.92
DDR1-248ENST00000503180 NEUROD2Q15784 382 aa20.79■□□□□ 0.92
DDR1-248ENST00000503180 DIEXFQ68CQ4 756 aaKnown RBP20.79■□□□□ 0.92
DDR1-248ENST00000503180 AKT1S1Q96B36 256 aa20.79■□□□□ 0.92
DDR1-248ENST00000503180 ZNF790Q6PG37 636 aa20.78■□□□□ 0.92
DDR1-248ENST00000503180 ADAMTS7Q9UKP4 1686 aa20.77■□□□□ 0.92
DDR1-248ENST00000503180 MRC1P22897 1456 aa20.77■□□□□ 0.92
DDR1-248ENST00000503180 AK7Q96M32 723 aa20.77■□□□□ 0.92
DDR1-248ENST00000503180 ZNF827Q17R98 1081 aa20.76■□□□□ 0.91
DDR1-248ENST00000503180 VSIG10Q8N0Z9 540 aa20.76■□□□□ 0.91
DDR1-248ENST00000503180 FLAD1Q8NFF5 587 aa20.76■□□□□ 0.91
DDR1-248ENST00000503180 RRP7AQ9Y3A4 280 aaKnown RBP20.76■□□□□ 0.91
DDR1-248ENST00000503180 ITPK1Q13572 414 aa20.75■□□□□ 0.91
DDR1-248ENST00000503180 SLC4A9Q96Q91 983 aa20.75■□□□□ 0.91
DDR1-248ENST00000503180 APAF1O14727 1248 aa20.74■□□□□ 0.91
DDR1-248ENST00000503180 RC3H1Q5TC82 1133 aaKnown RBP20.74■□□□□ 0.91
DDR1-248ENST00000503180 LINC00116Q8NCU8 138 aa20.74■□□□□ 0.91
DDR1-248ENST00000503180 FMNL2Q96PY5 1086 aa20.74■□□□□ 0.91
DDR1-248ENST00000503180 TEX13AQ9BXU3 409 aaPredicted RBP20.74■□□□□ 0.91
DDR1-248ENST00000503180 FAM9BQ8IZU0 186 aa20.73■□□□□ 0.91
DDR1-248ENST00000503180 VIRMAQ69YN4 1812 aaKnown RBP20.73■□□□□ 0.91
DDR1-248ENST00000503180 CCER2I3L3R5 266 aa20.71■□□□□ 0.91
DDR1-248ENST00000503180 MSH5O43196 834 aa20.71■□□□□ 0.91
DDR1-248ENST00000503180 SLC16A10Q8TF71 515 aa20.71■□□□□ 0.91
DDR1-248ENST00000503180 ZNF496Q96IT1 587 aaPredicted RBP20.71■□□□□ 0.91
DDR1-248ENST00000503180 THUMPD2Q9BTF0 503 aaKnown RBP20.71■□□□□ 0.91
DDR1-248ENST00000503180 STARD3NLO95772 234 aa20.7■□□□□ 0.9
DDR1-248ENST00000503180 BABAM1Q9NWV8 329 aa20.7■□□□□ 0.9
DDR1-248ENST00000503180 MIS18AQ9NYP9 233 aa20.7■□□□□ 0.9
DDR1-248ENST00000503180 TRIM35Q9UPQ4 493 aa20.7■□□□□ 0.9
DDR1-248ENST00000503180 RTCBQ9Y3I0 505 aaKnown RBP20.7■□□□□ 0.9
DDR1-248ENST00000503180 PAPPAQ13219 1627 aa20.7■□□□□ 0.9
DDR1-248ENST00000503180 DLG5Q8TDM6 1919 aa20.7■□□□□ 0.9
DDR1-248ENST00000503180 GNPATO15228 680 aa20.69■□□□□ 0.9
DDR1-248ENST00000503180 CALD1Q05682 793 aaKnown RBP20.69■□□□□ 0.9
DDR1-248ENST00000503180 DNAJC10Q8IXB1 793 aa20.69■□□□□ 0.9
DDR1-248ENST00000503180 SPON1Q9HCB6 807 aa20.69■□□□□ 0.9
DDR1-248ENST00000503180 C5P01031 1676 aa20.68■□□□□ 0.9
DDR1-248ENST00000503180 ZNF831Q5JPB2 1677 aa20.68■□□□□ 0.9
DDR1-248ENST00000503180 KCNQ3O43525 872 aa20.68■□□□□ 0.9
DDR1-248ENST00000503180 SSFA2P28290 1259 aa20.68■□□□□ 0.9
DDR1-248ENST00000503180 PDGFDQ9GZP0 370 aaPredicted RBP20.68■□□□□ 0.9
DDR1-248ENST00000503180 PNPLA7Q6ZV29 1317 aa20.68■□□□□ 0.9
DDR1-248ENST00000503180 CNTNAP4Q9C0A0 1308 aa20.68■□□□□ 0.9
DDR1-248ENST00000503180 HEG1Q9ULI3 1381 aa20.68■□□□□ 0.9
DDR1-248ENST00000503180 RPS6KA4O75676 772 aa20.67■□□□□ 0.9
DDR1-248ENST00000503180 CRKLP46109 303 aaKnown RBP20.67■□□□□ 0.9
DDR1-248ENST00000503180 TRAPPC3LQ5T215 181 aa20.67■□□□□ 0.9
DDR1-248ENST00000503180 MTFR1LQ9H019 292 aa20.67■□□□□ 0.9
DDR1-248ENST00000503180 TSPYL4Q9UJ04 414 aa20.67■□□□□ 0.9
DDR1-248ENST00000503180 TAF1LQ8IZX4 1826 aa20.67■□□□□ 0.9
DDR1-248ENST00000503180 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.66■□□□□ 0.9
DDR1-248ENST00000503180 ZBTB7AO95365 584 aa20.66■□□□□ 0.9
DDR1-248ENST00000503180 SNRPA1P09661 255 aaKnown RBP20.66■□□□□ 0.9
DDR1-248ENST00000503180 CYP19A1P11511 503 aaPredicted RBP20.66■□□□□ 0.9
DDR1-248ENST00000503180 NCBP3Q53F19 620 aaKnown RBP20.66■□□□□ 0.9
DDR1-248ENST00000503180 COL23A1Q86Y22 540 aaPredicted RBP20.66■□□□□ 0.9
DDR1-248ENST00000503180 C4BP0C0L5 1744 aa20.66■□□□□ 0.9
DDR1-248ENST00000503180 SIPA1L3O60292 1781 aaPredicted RBP20.66■□□□□ 0.9
DDR1-248ENST00000503180 SRCAPQ6ZRS2 3230 aa20.66■□□□□ 0.9
DDR1-248ENST00000503180 PHF14O94880 888 aa20.65■□□□□ 0.9
DDR1-248ENST00000503180 ADRA2BP18089 450 aa20.65■□□□□ 0.9
DDR1-248ENST00000503180 CCDC87Q9NVE4 849 aa20.65■□□□□ 0.9
DDR1-248ENST00000503180 LAS1LQ9Y4W2 734 aaKnown RBP20.65■□□□□ 0.9
DDR1-248ENST00000503180 KCPQ6ZWJ8 1503 aa20.64■□□□□ 0.9
DDR1-248ENST00000503180 ATF5Q9Y2D1 282 aaPredicted RBP20.64■□□□□ 0.89
DDR1-248ENST00000503180 CCDC27Q2M243 656 aa20.63■□□□□ 0.89
DDR1-248ENST00000503180 INTS5Q6P9B9 1019 aaKnown RBP20.63■□□□□ 0.89
DDR1-248ENST00000503180 NPM2Q86SE8 214 aaKnown RBP20.63■□□□□ 0.89
DDR1-248ENST00000503180 NGEFQ8N5V2 710 aa20.63■□□□□ 0.89
DDR1-248ENST00000503180 CHL1O00533 1208 aa20.62■□□□□ 0.89
DDR1-248ENST00000503180 RFC4P35249 363 aa20.62■□□□□ 0.89
DDR1-248ENST00000503180 EIF4A1P60842 406 aaKnown RBP20.62■□□□□ 0.89
DDR1-248ENST00000503180 CFAP44Q96MT7 982 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms