RNA–Protein interactions for RNA: ENST00000502820.1

HTT-202, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 287 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-202ENST00000502820 CLEC11AQ9Y240 323 aa7.16□□□□□ -1.26
HTT-202ENST00000502820 KIAA1210Q9ULL0 1709 aa7.15□□□□□ -1.26
HTT-202ENST00000502820 WNK3Q9BYP7 1800 aa7.15□□□□□ -1.26
HTT-202ENST00000502820 POTEIP0CG38 1075 aa7.15□□□□□ -1.26
HTT-202ENST00000502820 POTEJP0CG39 1038 aa7.15□□□□□ -1.26
HTT-202ENST00000502820 KCNA3P22001 575 aa7.15□□□□□ -1.26
HTT-202ENST00000502820 EAPPQ56P03 285 aaPredicted RBP7.15□□□□□ -1.26
HTT-202ENST00000502820 CHADLQ6NUI6 762 aa7.15□□□□□ -1.26
HTT-202ENST00000502820 PIGBQ92521 554 aa7.15□□□□□ -1.26
HTT-202ENST00000502820 ARHGEF1Q92888 912 aaKnown RBP7.15□□□□□ -1.26
HTT-202ENST00000502820 L3MBTL2Q969R5 705 aa7.15□□□□□ -1.26
HTT-202ENST00000502820 DCAF5Q96JK2 942 aa7.15□□□□□ -1.26
HTT-202ENST00000502820 ABT1Q9ULW3 272 aaKnown RBP7.15□□□□□ -1.26
HTT-202ENST00000502820 NSD3Q9BZ95 1437 aa7.15□□□□□ -1.27
HTT-202ENST00000502820 PIK3C2AO00443 1686 aa7.15□□□□□ -1.27
HTT-202ENST00000502820 HSPA8P11142 646 aaKnown RBP7.14□□□□□ -1.27
HTT-202ENST00000502820 LMNB1P20700 586 aa7.14□□□□□ -1.27
HTT-202ENST00000502820 ITPK1Q13572 414 aa7.14□□□□□ -1.27
HTT-202ENST00000502820 NBPF6Q5VWK0 638 aa7.14□□□□□ -1.27
HTT-202ENST00000502820 NBPF4Q96M43 638 aa7.14□□□□□ -1.27
HTT-202ENST00000502820 TUBGCP6Q96RT7 1819 aa7.14□□□□□ -1.27
HTT-202ENST00000502820 SIN3AQ96ST3 1273 aa7.14□□□□□ -1.27
HTT-202ENST00000502820 RGPD5Q99666 1765 aa7.14□□□□□ -1.27
HTT-202ENST00000502820 TMOD3Q9NYL9 352 aa7.14□□□□□ -1.27
HTT-202ENST00000502820 ASAP1Q9ULH1 1129 aa7.14□□□□□ -1.27
HTT-202ENST00000502820 CICQ96RK0 1608 aaPredicted RBP7.13□□□□□ -1.27
HTT-202ENST00000502820 CNTNAP1P78357 1384 aa7.13□□□□□ -1.27
HTT-202ENST00000502820 PCDH11XQ9BZA7 1347 aa7.13□□□□□ -1.27
HTT-202ENST00000502820 PCDH11YQ9BZA8 1340 aa7.13□□□□□ -1.27
HTT-202ENST00000502820 HOXC9P31274 260 aa7.13□□□□□ -1.27
HTT-202ENST00000502820 RRS1Q15050 365 aaKnown RBP7.13□□□□□ -1.27
HTT-202ENST00000502820 COG3Q96JB2 828 aa7.13□□□□□ -1.27
HTT-202ENST00000502820 BCL11AQ9H165 835 aa7.13□□□□□ -1.27
HTT-202ENST00000502820 WBP1LQ9NX94 342 aa7.13□□□□□ -1.27
HTT-202ENST00000502820 MEGF6O75095 1541 aa7.12□□□□□ -1.27
HTT-202ENST00000502820 NFAT5O94916 1531 aa7.12□□□□□ -1.27
HTT-202ENST00000502820 MAP3K19Q56UN5 1328 aa7.12□□□□□ -1.27
HTT-202ENST00000502820 TMEM88BA6NKF7 163 aa7.12□□□□□ -1.27
HTT-202ENST00000502820 GYS1P13807 737 aa7.12□□□□□ -1.27
HTT-202ENST00000502820 MAP2K1Q02750 393 aaPredicted RBP7.12□□□□□ -1.27
HTT-202ENST00000502820 DEFB115Q30KQ5 88 aa7.12□□□□□ -1.27
HTT-202ENST00000502820 ERFEQ4G0M1 354 aa7.12□□□□□ -1.27
HTT-202ENST00000502820 SLC12A5Q9H2X9 1139 aa7.12□□□□□ -1.27
HTT-202ENST00000502820 SRP68Q9UHB9 627 aaKnown RBP7.12□□□□□ -1.27
HTT-202ENST00000502820 QSER1Q2KHR3 1735 aa7.12□□□□□ -1.27
HTT-202ENST00000502820 COL24A1Q17RW2 1714 aa7.11□□□□□ -1.27
HTT-202ENST00000502820 DOT1LQ8TEK3 1739 aa7.11□□□□□ -1.27
HTT-202ENST00000502820 PPM1GO15355 546 aaPredicted RBP7.11□□□□□ -1.27
HTT-202ENST00000502820 CYP27B1O15528 508 aa7.11□□□□□ -1.27
HTT-202ENST00000502820 DDNO94850 711 aaPredicted RBP7.11□□□□□ -1.27
HTT-202ENST00000502820 C10orf71Q711Q0 1435 aa7.1□□□□□ -1.27
HTT-202ENST00000502820 WDR33Q9C0J8 1336 aaKnown RBP7.1□□□□□ -1.27
HTT-202ENST00000502820 POTECB2RU33 542 aa7.1□□□□□ -1.27
HTT-202ENST00000502820 SOX10P56693 466 aa7.1□□□□□ -1.27
HTT-202ENST00000502820 DGKZQ13574 1117 aa7.1□□□□□ -1.27
HTT-202ENST00000502820 FKBP8Q14318 412 aa7.1□□□□□ -1.27
HTT-202ENST00000502820 ZNF622Q969S3 477 aaKnown RBP eCLIP7.1□□□□□ -1.27
HTT-202ENST00000502820 C4BP0C0L5 1744 aa7.1□□□□□ -1.27
HTT-202ENST00000502820 ROCK2O75116 1388 aaKnown RBP7.09□□□□□ -1.27
HTT-202ENST00000502820 C21orf2O43822 256 aa7.09□□□□□ -1.27
HTT-202ENST00000502820 PTCD1O75127 700 aaKnown RBP7.09□□□□□ -1.27
HTT-202ENST00000502820 RGS19P49795 217 aa7.09□□□□□ -1.27
HTT-202ENST00000502820 C2CD5Q86YS7 1000 aa7.09□□□□□ -1.27
HTT-202ENST00000502820 TTLL6Q8N841 843 aa7.09□□□□□ -1.27
HTT-202ENST00000502820 MCOLN1Q9GZU1 580 aa7.09□□□□□ -1.27
HTT-202ENST00000502820 ATG3Q9NT62 314 aa7.09□□□□□ -1.27
HTT-202ENST00000502820 TERF2IPQ9NYB0 399 aa7.09□□□□□ -1.27
HTT-202ENST00000502820 N4BP2Q86UW6 1770 aaPredicted RBP7.09□□□□□ -1.27
HTT-202ENST00000502820 C5P01031 1676 aa7.09□□□□□ -1.27
HTT-202ENST00000502820 QRICH2Q9H0J4 1663 aa7.09□□□□□ -1.27
HTT-202ENST00000502820 SMG6Q86US8 1419 aaKnown RBP7.09□□□□□ -1.28
HTT-202ENST00000502820 USP31Q70CQ4 1352 aa7.08□□□□□ -1.28
HTT-202ENST00000502820 CGNL1Q0VF96 1302 aa7.08□□□□□ -1.28
HTT-202ENST00000502820 NPHP1O15259 732 aa7.08□□□□□ -1.28
HTT-202ENST00000502820 ZPR1O75312 459 aa7.08□□□□□ -1.28
HTT-202ENST00000502820 DDR1Q08345 913 aa7.08□□□□□ -1.28
HTT-202ENST00000502820 MAP1SQ66K74 1059 aaPredicted RBP7.08□□□□□ -1.28
HTT-202ENST00000502820 BICDL1Q6ZP65 573 aa7.08□□□□□ -1.28
HTT-202ENST00000502820 SPG7Q9UQ90 795 aa7.08□□□□□ -1.28
HTT-202ENST00000502820 SBNO2Q9Y2G9 1366 aa7.08□□□□□ -1.28
HTT-202ENST00000502820 LY75O60449 1722 aa7.07□□□□□ -1.28
HTT-202ENST00000502820 ZC3H4Q9UPT8 1303 aaKnown RBP7.07□□□□□ -1.28
HTT-202ENST00000502820 H0YIN7 160 aa7.07□□□□□ -1.28
HTT-202ENST00000502820 NFKBIEO00221 500 aa7.07□□□□□ -1.28
HTT-202ENST00000502820 RPS6KA4O75676 772 aa7.07□□□□□ -1.28
HTT-202ENST00000502820 HSP90AB2PQ58FF8 381 aa7.07□□□□□ -1.28
HTT-202ENST00000502820 CYP4F22Q6NT55 531 aa7.07□□□□□ -1.28
HTT-202ENST00000502820 LDHDQ86WU2 507 aa7.07□□□□□ -1.28
HTT-202ENST00000502820 CCDC24Q8N4L8 307 aa7.07□□□□□ -1.28
HTT-202ENST00000502820 GPR101Q96P66 508 aaPredicted RBP7.07□□□□□ -1.28
HTT-202ENST00000502820 GGNBP2Q9H3C7 697 aa7.07□□□□□ -1.28
HTT-202ENST00000502820 IQCA1LA6NCM1 817 aa7.06□□□□□ -1.28
HTT-202ENST00000502820 ADRA2BP18089 450 aa7.06□□□□□ -1.28
HTT-202ENST00000502820 USPL1Q5W0Q7 1092 aa7.06□□□□□ -1.28
HTT-202ENST00000502820 CNTROBQ8N137 903 aa7.06□□□□□ -1.28
HTT-202ENST00000502820 CAPNS2Q96L46 248 aa7.06□□□□□ -1.28
HTT-202ENST00000502820 POLRMTO00411 1230 aaKnown RBP7.05□□□□□ -1.28
HTT-202ENST00000502820 AOC2O75106 756 aa7.05□□□□□ -1.28
HTT-202ENST00000502820 TAF1DQ9H5J8 278 aaPredicted RBP7.05□□□□□ -1.28
HTT-202ENST00000502820 TONSLQ96HA7 1378 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 113.4 ms