RNA–Protein interactions for RNA: ENST00000498756.5

GPATCH4-210, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-210ENST00000498756 TOGARAM1Q9Y4F4 1720 aa14.15□□□□□ -0.14
GPATCH4-210ENST00000498756 ERVV-2B6SEH9 535 aa14.15□□□□□ -0.14
GPATCH4-210ENST00000498756 CABP4P57796 275 aa14.15□□□□□ -0.14
GPATCH4-210ENST00000498756 LMOD3Q0VAK6 560 aa14.15□□□□□ -0.14
GPATCH4-210ENST00000498756 SLC39A6Q13433 755 aa14.15□□□□□ -0.14
GPATCH4-210ENST00000498756 WDR63Q8IWG1 891 aa14.15□□□□□ -0.14
GPATCH4-210ENST00000498756 NGEFQ8N5V2 710 aa14.15□□□□□ -0.14
GPATCH4-210ENST00000498756 LAS1LQ9Y4W2 734 aaKnown RBP14.15□□□□□ -0.14
GPATCH4-210ENST00000498756 TNS1Q9HBL0 1735 aaKnown RBP14.15□□□□□ -0.14
GPATCH4-210ENST00000498756 ZBED9Q6R2W3 1325 aa14.15□□□□□ -0.15
GPATCH4-210ENST00000498756 CHL1O00533 1208 aa14.14□□□□□ -0.15
GPATCH4-210ENST00000498756 TAF7Q15545 349 aaPredicted RBP14.14□□□□□ -0.15
GPATCH4-210ENST00000498756 TSR2Q969E8 191 aaKnown RBP14.14□□□□□ -0.15
GPATCH4-210ENST00000498756 SYTL4Q96C24 671 aaPredicted RBP14.14□□□□□ -0.15
GPATCH4-210ENST00000498756 CAMKK2Q96RR4 588 aa14.14□□□□□ -0.15
GPATCH4-210ENST00000498756 SLFN5Q08AF3 891 aa14.13□□□□□ -0.15
GPATCH4-210ENST00000498756 TEFQ10587 303 aa14.13□□□□□ -0.15
GPATCH4-210ENST00000498756 TRMT2AQ8IZ69 625 aaKnown RBP14.13□□□□□ -0.15
GPATCH4-210ENST00000498756 ASAP1Q9ULH1 1129 aa14.13□□□□□ -0.15
GPATCH4-210ENST00000498756 SCN11AQ9UI33 1791 aa14.13□□□□□ -0.15
GPATCH4-210ENST00000498756 KAT6BQ8WYB5 2073 aa14.13□□□□□ -0.15
GPATCH4-210ENST00000498756 SBF2Q86WG5 1849 aa14.13□□□□□ -0.15
GPATCH4-210ENST00000498756 PSDA5PKW4 1024 aaPredicted RBP14.12□□□□□ -0.15
GPATCH4-210ENST00000498756 GOLGA2Q08379 1002 aa14.12□□□□□ -0.15
GPATCH4-210ENST00000498756 KRT24Q2M2I5 525 aa14.12□□□□□ -0.15
GPATCH4-210ENST00000498756 MBIPQ9NS73 344 aa14.12□□□□□ -0.15
GPATCH4-210ENST00000498756 BCL9O00512 1426 aa14.12□□□□□ -0.15
GPATCH4-210ENST00000498756 BTBD11A6QL63 1104 aa14.11□□□□□ -0.15
GPATCH4-210ENST00000498756 CFAP44Q96MT7 982 aa14.11□□□□□ -0.15
GPATCH4-210ENST00000498756 BCL11BQ9C0K0 894 aaPredicted RBP14.11□□□□□ -0.15
GPATCH4-210ENST00000498756 ATG3Q9NT62 314 aa14.11□□□□□ -0.15
GPATCH4-210ENST00000498756 TMOD3Q9NYL9 352 aa14.11□□□□□ -0.15
GPATCH4-210ENST00000498756 MRC1P22897 1456 aa14.11□□□□□ -0.15
GPATCH4-210ENST00000498756 IL16Q14005 1332 aa14.11□□□□□ -0.15
GPATCH4-210ENST00000498756 DUSP27Q5VZP5 1158 aa14.1□□□□□ -0.15
GPATCH4-210ENST00000498756 IFT57Q9NWB7 429 aa14.1□□□□□ -0.15
GPATCH4-210ENST00000498756 VIRMAQ69YN4 1812 aaKnown RBP14.1□□□□□ -0.15
GPATCH4-210ENST00000498756 SRCAPQ6ZRS2 3230 aa14.1□□□□□ -0.15
GPATCH4-210ENST00000498756 DOT1LQ8TEK3 1739 aa14.1□□□□□ -0.15
GPATCH4-210ENST00000498756 GNAI1P63096 354 aa14.09□□□□□ -0.15
GPATCH4-210ENST00000498756 R3HDM1Q15032 1099 aaKnown RBP14.09□□□□□ -0.15
GPATCH4-210ENST00000498756 SLC4A9Q96Q91 983 aa14.09□□□□□ -0.15
GPATCH4-210ENST00000498756 TSPYL4Q9UJ04 414 aa14.09□□□□□ -0.15
GPATCH4-210ENST00000498756 FANCIQ9NVI1 1328 aa14.09□□□□□ -0.15
GPATCH4-210ENST00000498756 SIPA1L3O60292 1781 aaPredicted RBP14.09□□□□□ -0.15
GPATCH4-210ENST00000498756 ITGB4P16144 1822 aa14.08□□□□□ -0.15
GPATCH4-210ENST00000498756 PRAMEF22A3QJZ6 481 aa14.08□□□□□ -0.16
GPATCH4-210ENST00000498756 PLSCR1O15162 318 aa14.08□□□□□ -0.16
GPATCH4-210ENST00000498756 EIF4A1P60842 406 aaKnown RBP14.08□□□□□ -0.16
GPATCH4-210ENST00000498756 ZNF790Q6PG37 636 aa14.08□□□□□ -0.16
GPATCH4-210ENST00000498756 TSPYL6Q8N831 410 aa14.08□□□□□ -0.16
GPATCH4-210ENST00000498756 C8orf58Q8NAV2 365 aa14.08□□□□□ -0.16
GPATCH4-210ENST00000498756 E9PSI1 815 aa14.07□□□□□ -0.16
GPATCH4-210ENST00000498756 CALD1Q05682 793 aaKnown RBP14.07□□□□□ -0.16
GPATCH4-210ENST00000498756 EXOSC9Q06265 439 aaKnown RBP14.07□□□□□ -0.16
GPATCH4-210ENST00000498756 ZNF496Q96IT1 587 aaPredicted RBP14.07□□□□□ -0.16
GPATCH4-210ENST00000498756 ELL2O00472 640 aaPredicted RBP14.06□□□□□ -0.16
GPATCH4-210ENST00000498756 PTCD1O75127 700 aaKnown RBP14.06□□□□□ -0.16
GPATCH4-210ENST00000498756 KCNQ4P56696 695 aa14.06□□□□□ -0.16
GPATCH4-210ENST00000498756 NBPF14Q5TI25 921 aa14.06□□□□□ -0.16
GPATCH4-210ENST00000498756 BABAM1Q9NWV8 329 aa14.05□□□□□ -0.16
GPATCH4-210ENST00000498756 HEG1Q9ULI3 1381 aa14.05□□□□□ -0.16
GPATCH4-210ENST00000498756 NHSQ6T4R5 1651 aa14.04□□□□□ -0.16
GPATCH4-210ENST00000498756 PROM2Q8N271 834 aa14.04□□□□□ -0.16
GPATCH4-210ENST00000498756 RBM42Q9BTD8 480 aaKnown RBP14.04□□□□□ -0.16
GPATCH4-210ENST00000498756 MYH16Q9H6N6 1097 aa14.04□□□□□ -0.16
GPATCH4-210ENST00000498756 USP16Q9Y5T5 823 aa14.03□□□□□ -0.16
GPATCH4-210ENST00000498756 KCPQ6ZWJ8 1503 aa14.03□□□□□ -0.16
GPATCH4-210ENST00000498756 KDM3BQ7LBC6 1761 aa14.03□□□□□ -0.16
GPATCH4-210ENST00000498756 PALLDQ8WX93 1383 aa14.02□□□□□ -0.17
GPATCH4-210ENST00000498756 VAMP4O75379 141 aa14.02□□□□□ -0.17
GPATCH4-210ENST00000498756 GIGYF1O75420 1035 aaPredicted RBP14.02□□□□□ -0.17
GPATCH4-210ENST00000498756 ITPK1Q13572 414 aa14.02□□□□□ -0.17
GPATCH4-210ENST00000498756 BTAF1O14981 1849 aa14.01□□□□□ -0.17
GPATCH4-210ENST00000498756 RREB1Q92766 1687 aa14.01□□□□□ -0.17
GPATCH4-210ENST00000498756 PAPPAQ13219 1627 aa14.01□□□□□ -0.17
GPATCH4-210ENST00000498756 TCERG1O14776 1098 aaKnown RBP14.01□□□□□ -0.17
GPATCH4-210ENST00000498756 TXNRD1Q16881 649 aa14.01□□□□□ -0.17
GPATCH4-210ENST00000498756 DNAJC10Q8IXB1 793 aa14.01□□□□□ -0.17
GPATCH4-210ENST00000498756 TTC5Q8N0Z6 440 aa14.01□□□□□ -0.17
GPATCH4-210ENST00000498756 LRRC4BQ9NT99 713 aa14.01□□□□□ -0.17
GPATCH4-210ENST00000498756 NUP188Q5SRE5 1749 aa14.01□□□□□ -0.17
GPATCH4-210ENST00000498756 LOC102724428A0A0B4J2F2 783 aa14□□□□□ -0.17
GPATCH4-210ENST00000498756 SIK1P57059 783 aa14□□□□□ -0.17
GPATCH4-210ENST00000498756 NECTIN2Q92692 538 aa14□□□□□ -0.17
GPATCH4-210ENST00000498756 SMARCC1Q92922 1105 aaPredicted RBP14□□□□□ -0.17
GPATCH4-210ENST00000498756 FMNL2Q96PY5 1086 aa14□□□□□ -0.17
GPATCH4-210ENST00000498756 TWISTNBQ3B726 338 aaPredicted RBP13.99□□□□□ -0.17
GPATCH4-210ENST00000498756 SNRPA1P09661 255 aaKnown RBP13.98□□□□□ -0.17
GPATCH4-210ENST00000498756 EIF2S2P20042 333 aaKnown RBP13.98□□□□□ -0.17
GPATCH4-210ENST00000498756 ATP6V1AP38606 617 aa13.98□□□□□ -0.17
GPATCH4-210ENST00000498756 PIP4K2AP48426 406 aaPredicted RBP13.98□□□□□ -0.17
GPATCH4-210ENST00000498756 UBR2Q8IWV8 1755 aa13.98□□□□□ -0.17
GPATCH4-210ENST00000498756 RGPD3A6NKT7 1758 aaPredicted RBP13.97□□□□□ -0.17
GPATCH4-210ENST00000498756 RGPD4Q7Z3J3 1758 aa13.97□□□□□ -0.17
GPATCH4-210ENST00000498756 A1BGP04217 495 aa13.97□□□□□ -0.17
GPATCH4-210ENST00000498756 SMIM5Q71RC9 77 aa13.97□□□□□ -0.17
GPATCH4-210ENST00000498756 LINC00116Q8NCU8 138 aa13.97□□□□□ -0.17
GPATCH4-210ENST00000498756 ANXA1P04083 346 aa13.96□□□□□ -0.17
GPATCH4-210ENST00000498756 CYP19A1P11511 503 aaPredicted RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms