RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 NWD2Q9ULI1 1742 aa15.66■□□□□ 0.1
AFF3-215ENST00000498090 TNNQ9UQP3 1299 aa15.66■□□□□ 0.1
AFF3-215ENST00000498090 CRB1P82279 1406 aa15.66■□□□□ 0.1
AFF3-215ENST00000498090 EVA1CP58658 441 aa15.65■□□□□ 0.1
AFF3-215ENST00000498090 ITPRIPQ8IWB1 547 aa15.65■□□□□ 0.1
AFF3-215ENST00000498090 SMC5Q8IY18 1101 aa15.65■□□□□ 0.1
AFF3-215ENST00000498090 CARD10Q9BWT7 1032 aa15.65■□□□□ 0.1
AFF3-215ENST00000498090 NOB1Q9ULX3 412 aaKnown RBP15.65■□□□□ 0.1
AFF3-215ENST00000498090 NGLY1Q96IV0 654 aa15.64■□□□□ 0.09
AFF3-215ENST00000498090 ZBTB40Q9NUA8 1239 aa15.64■□□□□ 0.09
AFF3-215ENST00000498090 GNAI1P63096 354 aa15.63■□□□□ 0.09
AFF3-215ENST00000498090 IFT57Q9NWB7 429 aa15.63■□□□□ 0.09
AFF3-215ENST00000498090 BCL9LQ86UU0 1499 aa15.63■□□□□ 0.09
AFF3-215ENST00000498090 SEC24BO95487 1268 aa15.62■□□□□ 0.09
AFF3-215ENST00000498090 ZNF772Q68DY9 489 aaPredicted RBP15.62■□□□□ 0.09
AFF3-215ENST00000498090 DLG5Q8TDM6 1919 aa15.62■□□□□ 0.09
AFF3-215ENST00000498090 OVOS2A0A0G2JMS6 1433 aa15.62■□□□□ 0.09
AFF3-215ENST00000498090 GAS2L2Q8NHY3 880 aa15.61■□□□□ 0.09
AFF3-215ENST00000498090 DISP2A7MBM2 1401 aa15.61■□□□□ 0.09
AFF3-215ENST00000498090 TMEM57Q8N5G2 664 aa15.6■□□□□ 0.09
AFF3-215ENST00000498090 RAPGEF4Q8WZA2 1011 aa15.6■□□□□ 0.09
AFF3-215ENST00000498090 PKD1L3Q7Z443 1732 aa15.6■□□□□ 0.09
AFF3-215ENST00000498090 PARP4Q9UKK3 1724 aaKnown RBP15.6■□□□□ 0.09
AFF3-215ENST00000498090 EIF5BO60841 1220 aaKnown RBP15.6■□□□□ 0.09
AFF3-215ENST00000498090 TATP17735 454 aaPredicted RBP15.6■□□□□ 0.09
AFF3-215ENST00000498090 THUMPD2Q9BTF0 503 aaKnown RBP15.6■□□□□ 0.09
AFF3-215ENST00000498090 USP21Q9UK80 565 aa15.6■□□□□ 0.09
AFF3-215ENST00000498090 PLEKHG2Q9H7P9 1386 aa15.59■□□□□ 0.09
AFF3-215ENST00000498090 DCTN1Q14203 1278 aa15.59■□□□□ 0.09
AFF3-215ENST00000498090 UNC5CLQ8IV45 518 aa15.59■□□□□ 0.09
AFF3-215ENST00000498090 MAP3K5Q99683 1374 aa15.58■□□□□ 0.09
AFF3-215ENST00000498090 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.58■□□□□ 0.09
AFF3-215ENST00000498090 ZNF853P0CG23 659 aa15.58■□□□□ 0.08
AFF3-215ENST00000498090 NUCB1Q02818 461 aa15.58■□□□□ 0.08
AFF3-215ENST00000498090 PLEKHO1Q53GL0 409 aaPredicted RBP15.58■□□□□ 0.08
AFF3-215ENST00000498090 ZNF530Q6P9A1 599 aaPredicted RBP15.58■□□□□ 0.08
AFF3-215ENST00000498090 GCC1Q96CN9 775 aa15.58■□□□□ 0.08
AFF3-215ENST00000498090 QTRT2Q9H974 415 aaKnown RBP15.58■□□□□ 0.08
AFF3-215ENST00000498090 WNK3Q9BYP7 1800 aa15.58■□□□□ 0.08
AFF3-215ENST00000498090 SPATA31A1Q5TZJ5 1347 aa15.58■□□□□ 0.08
AFF3-215ENST00000498090 LRRC37A3O60309 1634 aa15.58■□□□□ 0.08
AFF3-215ENST00000498090 IL2RBP14784 551 aa15.57■□□□□ 0.08
AFF3-215ENST00000498090 AMOTQ4VCS5 1084 aa15.57■□□□□ 0.08
AFF3-215ENST00000498090 SPATA31A5Q5VU36 1347 aa15.57■□□□□ 0.08
AFF3-215ENST00000498090 SPATA31A7Q8IWB4 1347 aa15.57■□□□□ 0.08
AFF3-215ENST00000498090 ATRNO75882 1429 aa15.57■□□□□ 0.08
AFF3-215ENST00000498090 VAMP4O75379 141 aa15.57■□□□□ 0.08
AFF3-215ENST00000498090 MCM10Q7L590 875 aa15.57■□□□□ 0.08
AFF3-215ENST00000498090 SHANK3Q9BYB0 1731 aa15.56■□□□□ 0.08
AFF3-215ENST00000498090 MRPL50Q8N5N7 158 aaKnown RBP15.56■□□□□ 0.08
AFF3-215ENST00000498090 CFAP44Q96MT7 982 aa15.56■□□□□ 0.08
AFF3-215ENST00000498090 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.56■□□□□ 0.08
AFF3-215ENST00000498090 FRAT2O75474 233 aaPredicted RBP15.55■□□□□ 0.08
AFF3-215ENST00000498090 VPS72Q15906 364 aa15.55■□□□□ 0.08
AFF3-215ENST00000498090 PPP4R3CPQ6ZMV5 832 aa15.55■□□□□ 0.08
AFF3-215ENST00000498090 C22orf23Q9BZE7 217 aa15.55■□□□□ 0.08
AFF3-215ENST00000498090 API5Q9BZZ5 524 aaKnown RBP15.55■□□□□ 0.08
AFF3-215ENST00000498090 GNAT3A8MTJ3 354 aa15.54■□□□□ 0.08
AFF3-215ENST00000498090 AKAP4Q5JQC9 854 aa15.54■□□□□ 0.08
AFF3-215ENST00000498090 ANTXR1Q9H6X2 564 aa15.54■□□□□ 0.08
AFF3-215ENST00000498090 ADAMTS7Q9UKP4 1686 aa15.54■□□□□ 0.08
AFF3-215ENST00000498090 CYP27B1O15528 508 aa15.54■□□□□ 0.08
AFF3-215ENST00000498090 PHKG2P15735 406 aa15.54■□□□□ 0.08
AFF3-215ENST00000498090 RXRBP28702 533 aa15.54■□□□□ 0.08
AFF3-215ENST00000498090 IL17REQ8NFR9 667 aa15.54■□□□□ 0.08
AFF3-215ENST00000498090 TBC1D2Q9BYX2 928 aa15.54■□□□□ 0.08
AFF3-215ENST00000498090 TRPC5Q9UL62 973 aaPredicted RBP15.54■□□□□ 0.08
AFF3-215ENST00000498090 SPG7Q9UQ90 795 aa15.54■□□□□ 0.08
AFF3-215ENST00000498090 ABCC4O15439 1325 aa15.54■□□□□ 0.08
AFF3-215ENST00000498090 KDM6AO15550 1401 aaPredicted RBP15.54■□□□□ 0.08
AFF3-215ENST00000498090 ZBTB7BO15156 539 aaPredicted RBP15.53■□□□□ 0.08
AFF3-215ENST00000498090 HTATSF1O43719 755 aaKnown RBP15.53■□□□□ 0.08
AFF3-215ENST00000498090 CHD1LQ86WJ1 897 aa15.53■□□□□ 0.08
AFF3-215ENST00000498090 CEMIPQ8WUJ3 1361 aa15.53■□□□□ 0.08
AFF3-215ENST00000498090 CCDC9Q9Y3X0 531 aaKnown RBP15.53■□□□□ 0.08
AFF3-215ENST00000498090 GLI3P10071 1580 aa15.52■□□□□ 0.08
AFF3-215ENST00000498090 BMP2KLQ5H9B9 411 aa15.52■□□□□ 0.08
AFF3-215ENST00000498090 C1orf141Q5JVX7 400 aa15.52■□□□□ 0.08
AFF3-215ENST00000498090 ZCRB1Q8TBF4 217 aaKnown RBP15.52■□□□□ 0.08
AFF3-215ENST00000498090 RTF1Q92541 710 aaKnown RBP15.52■□□□□ 0.08
AFF3-215ENST00000498090 THRAP3Q9Y2W1 955 aaKnown RBP15.52■□□□□ 0.08
AFF3-215ENST00000498090 TNS2Q63HR2 1409 aa15.51■□□□□ 0.07
AFF3-215ENST00000498090 RBM25P49756 843 aaKnown RBP15.51■□□□□ 0.07
AFF3-215ENST00000498090 RBM6P78332 1123 aaKnown RBP15.51■□□□□ 0.07
AFF3-215ENST00000498090 LGR6Q9HBX8 967 aa15.51■□□□□ 0.07
AFF3-215ENST00000498090 MBIPQ9NS73 344 aa15.51■□□□□ 0.07
AFF3-215ENST00000498090 PCDH11XQ9BZA7 1347 aa15.51■□□□□ 0.07
AFF3-215ENST00000498090 PCDH11YQ9BZA8 1340 aa15.51■□□□□ 0.07
AFF3-215ENST00000498090 TWISTNBQ3B726 338 aaPredicted RBP15.51■□□□□ 0.07
AFF3-215ENST00000498090 MPRIPQ6WCQ1 1025 aa15.51■□□□□ 0.07
AFF3-215ENST00000498090 BARGINQ6ZT62 677 aa15.51■□□□□ 0.07
AFF3-215ENST00000498090 GJD4Q96KN9 370 aaPredicted RBP15.51■□□□□ 0.07
AFF3-215ENST00000498090 RNMTO43148 476 aaKnown RBP15.5■□□□□ 0.07
AFF3-215ENST00000498090 IFNL2Q8IZJ0 200 aa15.5■□□□□ 0.07
AFF3-215ENST00000498090 RGS12O14924 1447 aa15.49■□□□□ 0.07
AFF3-215ENST00000498090 MFAP1P55081 439 aaKnown RBP15.49■□□□□ 0.07
AFF3-215ENST00000498090 HSCBQ8IWL3 235 aa15.48■□□□□ 0.07
AFF3-215ENST00000498090 SNX21Q969T3 373 aa15.48■□□□□ 0.07
AFF3-215ENST00000498090 CHMP5Q9NZZ3 219 aa15.48■□□□□ 0.07
AFF3-215ENST00000498090 MRC1P22897 1456 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms