RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 DIAPH1O60610 1272 aaKnown RBP15.16■□□□□ 0.02
ERCC8-208ENST00000497892 AEBP1Q8IUX7 1158 aa15.16■□□□□ 0.02
ERCC8-208ENST00000497892 NUP188Q5SRE5 1749 aa15.16■□□□□ 0.02
ERCC8-208ENST00000497892 APBA3O96018 575 aa15.15■□□□□ 0.02
ERCC8-208ENST00000497892 PTF1AQ7RTS3 328 aa15.15■□□□□ 0.02
ERCC8-208ENST00000497892 KAT6BQ8WYB5 2073 aa15.14■□□□□ 0.01
ERCC8-208ENST00000497892 CYP27B1O15528 508 aa15.14■□□□□ 0.01
ERCC8-208ENST00000497892 EN1Q05925 392 aaPredicted RBP15.14■□□□□ 0.01
ERCC8-208ENST00000497892 SULT6B1Q6IMI4 303 aa15.14■□□□□ 0.01
ERCC8-208ENST00000497892 CFAP53Q96M91 514 aa15.14■□□□□ 0.01
ERCC8-208ENST00000497892 SPG7Q9UQ90 795 aa15.14■□□□□ 0.01
ERCC8-208ENST00000497892 ZNF316A6NFI3 1004 aaPredicted RBP15.13■□□□□ 0.01
ERCC8-208ENST00000497892 KCNQ2O43526 872 aa15.13■□□□□ 0.01
ERCC8-208ENST00000497892 ACSBG1Q96GR2 724 aa15.13■□□□□ 0.01
ERCC8-208ENST00000497892 CAMKK2Q96RR4 588 aa15.13■□□□□ 0.01
ERCC8-208ENST00000497892 ITGB4P16144 1822 aa15.13■□□□□ 0.01
ERCC8-208ENST00000497892 RALBP1Q15311 655 aa15.12■□□□□ 0.01
ERCC8-208ENST00000497892 FAM212AQ96EL1 285 aa15.12■□□□□ 0.01
ERCC8-208ENST00000497892 PLSCR1O15162 318 aa15.11■□□□□ 0.01
ERCC8-208ENST00000497892 EZH2Q15910 746 aaKnown RBP15.11■□□□□ 0.01
ERCC8-208ENST00000497892 HMOX1P09601 288 aa15.1■□□□□ 0.01
ERCC8-208ENST00000497892 PHKG2P15735 406 aa15.1■□□□□ 0.01
ERCC8-208ENST00000497892 NKX1-1Q15270 411 aaPredicted RBP15.1■□□□□ 0.01
ERCC8-208ENST00000497892 AMOTQ4VCS5 1084 aa15.1■□□□□ 0.01
ERCC8-208ENST00000497892 TRPC6Q9Y210 931 aa15.1■□□□□ 0.01
ERCC8-208ENST00000497892 LY75O60449 1722 aa15.09■□□□□ 0.01
ERCC8-208ENST00000497892 POTEB2H3BUK9 544 aa15.09■□□□□ 0.01
ERCC8-208ENST00000497892 U2SURPO15042 1029 aaKnown RBP15.09■□□□□ 0.01
ERCC8-208ENST00000497892 PLEKHO1Q53GL0 409 aaPredicted RBP15.09■□□□□ 0.01
ERCC8-208ENST00000497892 IFNL2Q8IZJ0 200 aa15.09■□□□□ 0.01
ERCC8-208ENST00000497892 SLC39A7Q92504 469 aa15.09■□□□□ 0.01
ERCC8-208ENST00000497892 METRNQ9UJH8 293 aa15.09■□□□□ 0.01
ERCC8-208ENST00000497892 PRIM1P49642 420 aaKnown RBP15.08■□□□□ 0
ERCC8-208ENST00000497892 VASPP50552 380 aaPredicted RBP15.08■□□□□ 0
ERCC8-208ENST00000497892 ATN1P54259 1190 aaPredicted RBP15.08■□□□□ 0
ERCC8-208ENST00000497892 BMP2KQ9NSY1 1161 aaPredicted RBP15.08■□□□□ 0
ERCC8-208ENST00000497892 VIRMAQ69YN4 1812 aaKnown RBP15.08■□□□□ 0
ERCC8-208ENST00000497892 PAPPAQ13219 1627 aa15.07■□□□□ 0
ERCC8-208ENST00000497892 ADAMTS7Q9UKP4 1686 aa15.07■□□□□ 0
ERCC8-208ENST00000497892 SCN11AQ9UI33 1791 aa15.07■□□□□ 0
ERCC8-208ENST00000497892 C7P10643 843 aa15.07■□□□□ 0
ERCC8-208ENST00000497892 ZNF530Q6P9A1 599 aaPredicted RBP15.07■□□□□ 0
ERCC8-208ENST00000497892 SYTL4Q96C24 671 aaPredicted RBP15.07■□□□□ 0
ERCC8-208ENST00000497892 SGIP1Q9BQI5 828 aa15.07■□□□□ 0
ERCC8-208ENST00000497892 MYBBP1AQ9BQG0 1328 aaKnown RBP15.07■□□□□ 0
ERCC8-208ENST00000497892 KDM6AO15550 1401 aaPredicted RBP15.07■□□□□ 0
ERCC8-208ENST00000497892 TIE1P35590 1138 aa15.06■□□□□ 0
ERCC8-208ENST00000497892 NUDCQ9Y266 331 aa15.06■□□□□ 0
ERCC8-208ENST00000497892 PRKRIP1Q9H875 184 aaPredicted RBP15.05■□□□□ -0
ERCC8-208ENST00000497892 HSP90AB1P08238 724 aaKnown RBP15.04■□□□□ -0
ERCC8-208ENST00000497892 TXNRD1Q16881 649 aa15.04■□□□□ -0
ERCC8-208ENST00000497892 C1orf141Q5JVX7 400 aa15.04■□□□□ -0
ERCC8-208ENST00000497892 DCAF5Q96JK2 942 aa15.04■□□□□ -0
ERCC8-208ENST00000497892 RSPH6AQ9H0K4 717 aa15.04■□□□□ -0
ERCC8-208ENST00000497892 MRC1P22897 1456 aa15.03■□□□□ -0
ERCC8-208ENST00000497892 U2AF1L5P0DN76 240 aaPredicted RBP15.03■□□□□ -0
ERCC8-208ENST00000497892 U2AF1Q01081 240 aaKnown RBP eCLIP15.03■□□□□ -0
ERCC8-208ENST00000497892 PCDHB13Q9Y5F0 798 aa15.03■□□□□ -0
ERCC8-208ENST00000497892 PRKAR2BP31323 418 aa15.02■□□□□ -0
ERCC8-208ENST00000497892 MTHFSDQ2M296 383 aaKnown RBP15.02■□□□□ -0
ERCC8-208ENST00000497892 MPRIPQ6WCQ1 1025 aa15.02■□□□□ -0
ERCC8-208ENST00000497892 OTUD5Q96G74 571 aa15.02■□□□□ -0
ERCC8-208ENST00000497892 C5P01031 1676 aa15.01□□□□□ -0.01
ERCC8-208ENST00000497892 ERVV-2B6SEH9 535 aa15.01□□□□□ -0.01
ERCC8-208ENST00000497892 FCHSD2O94868 740 aa15.01□□□□□ -0.01
ERCC8-208ENST00000497892 AKAP4Q5JQC9 854 aa15.01□□□□□ -0.01
ERCC8-208ENST00000497892 PIGBQ92521 554 aa15.01□□□□□ -0.01
ERCC8-208ENST00000497892 TMOD3Q9NYL9 352 aa15.01□□□□□ -0.01
ERCC8-208ENST00000497892 PALLDQ8WX93 1383 aa15□□□□□ -0.01
ERCC8-208ENST00000497892 SLC27A3Q5K4L6 730 aa15□□□□□ -0.01
ERCC8-208ENST00000497892 TAF1LQ8IZX4 1826 aa15□□□□□ -0.01
ERCC8-208ENST00000497892 MAP3K5Q99683 1374 aa14.99□□□□□ -0.01
ERCC8-208ENST00000497892 NBPF14Q5TI25 921 aa14.99□□□□□ -0.01
ERCC8-208ENST00000497892 GAS2L2Q8NHY3 880 aa14.99□□□□□ -0.01
ERCC8-208ENST00000497892 PHACTR3Q96KR7 559 aa14.99□□□□□ -0.01
ERCC8-208ENST00000497892 ANO8Q9HCE9 1232 aaPredicted RBP14.99□□□□□ -0.01
ERCC8-208ENST00000497892 ZNF831Q5JPB2 1677 aa14.99□□□□□ -0.01
ERCC8-208ENST00000497892 SIPA1L3O60292 1781 aaPredicted RBP14.98□□□□□ -0.01
ERCC8-208ENST00000497892 QSER1Q2KHR3 1735 aa14.98□□□□□ -0.01
ERCC8-208ENST00000497892 PSDA5PKW4 1024 aaPredicted RBP14.98□□□□□ -0.01
ERCC8-208ENST00000497892 TTLL13PA6NNM8 815 aa14.98□□□□□ -0.01
ERCC8-208ENST00000497892 R3HDM1Q15032 1099 aaKnown RBP14.98□□□□□ -0.01
ERCC8-208ENST00000497892 LRRC4BQ9NT99 713 aa14.98□□□□□ -0.01
ERCC8-208ENST00000497892 CASZ1Q86V15 1759 aa14.98□□□□□ -0.01
ERCC8-208ENST00000497892 TUBGCP6Q96RT7 1819 aa14.97□□□□□ -0.01
ERCC8-208ENST00000497892 IFNL1Q8IU54 200 aa14.97□□□□□ -0.01
ERCC8-208ENST00000497892 SMARCC1Q92922 1105 aaPredicted RBP14.97□□□□□ -0.01
ERCC8-208ENST00000497892 DLG5Q8TDM6 1919 aa14.97□□□□□ -0.01
ERCC8-208ENST00000497892 CICQ96RK0 1608 aaPredicted RBP14.96□□□□□ -0.01
ERCC8-208ENST00000497892 CABP4P57796 275 aa14.96□□□□□ -0.01
ERCC8-208ENST00000497892 DCAF8Q5TAQ9 597 aa14.96□□□□□ -0.01
ERCC8-208ENST00000497892 CCNL1Q9UK58 526 aaPredicted RBP14.96□□□□□ -0.01
ERCC8-208ENST00000497892 LRP5O75197 1615 aa14.95□□□□□ -0.02
ERCC8-208ENST00000497892 GNAT3A8MTJ3 354 aa14.95□□□□□ -0.02
ERCC8-208ENST00000497892 RNMTO43148 476 aaKnown RBP14.95□□□□□ -0.02
ERCC8-208ENST00000497892 KLHL34Q8N239 644 aa14.95□□□□□ -0.02
ERCC8-208ENST00000497892 ASAP1Q9ULH1 1129 aa14.95□□□□□ -0.02
ERCC8-208ENST00000497892 UBR2Q8IWV8 1755 aa14.95□□□□□ -0.02
ERCC8-208ENST00000497892 C4BP0C0L5 1744 aa14.95□□□□□ -0.02
ERCC8-208ENST00000497892 SRCAPQ6ZRS2 3230 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms