RNA–Protein interactions for RNA: ENST00000497380.1

USP13-205, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 509 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-205ENST00000497380 TMOD3Q9NYL9 352 aa13.59□□□□□ -0.23
USP13-205ENST00000497380 TSPYL4Q9UJ04 414 aa13.59□□□□□ -0.23
USP13-205ENST00000497380 SHANK3Q9BYB0 1731 aa13.59□□□□□ -0.23
USP13-205ENST00000497380 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.23
USP13-205ENST00000497380 BCL9O00512 1426 aa13.58□□□□□ -0.24
USP13-205ENST00000497380 KDM6AO15550 1401 aaPredicted RBP13.58□□□□□ -0.24
USP13-205ENST00000497380 ZNF853P0CG23 659 aa13.58□□□□□ -0.24
USP13-205ENST00000497380 FAM196AQ6ZSG2 479 aa13.58□□□□□ -0.24
USP13-205ENST00000497380 CHMP4AQ9BY43 222 aa13.58□□□□□ -0.24
USP13-205ENST00000497380 ADAMTS7Q9UKP4 1686 aa13.58□□□□□ -0.24
USP13-205ENST00000497380 TRMT2AQ8IZ69 625 aaKnown RBP13.57□□□□□ -0.24
USP13-205ENST00000497380 CDCA7LQ96GN5 454 aa13.57□□□□□ -0.24
USP13-205ENST00000497380 DUSP27Q5VZP5 1158 aa13.56□□□□□ -0.24
USP13-205ENST00000497380 TTC5Q8N0Z6 440 aa13.56□□□□□ -0.24
USP13-205ENST00000497380 SYTL4Q96C24 671 aaPredicted RBP13.56□□□□□ -0.24
USP13-205ENST00000497380 MRC1P22897 1456 aa13.55□□□□□ -0.24
USP13-205ENST00000497380 CT47B1P0C2W7 299 aaPredicted RBP13.55□□□□□ -0.24
USP13-205ENST00000497380 PRIM1P49642 420 aaKnown RBP13.55□□□□□ -0.24
USP13-205ENST00000497380 MBIPQ9NS73 344 aa13.55□□□□□ -0.24
USP13-205ENST00000497380 SOS1Q07889 1333 aaPredicted RBP13.55□□□□□ -0.24
USP13-205ENST00000497380 ZNF790Q6PG37 636 aa13.54□□□□□ -0.24
USP13-205ENST00000497380 SMARCC1Q92922 1105 aaPredicted RBP13.54□□□□□ -0.24
USP13-205ENST00000497380 ACSBG1Q96GR2 724 aa13.54□□□□□ -0.24
USP13-205ENST00000497380 SPINK5Q9NQ38 1064 aaPredicted RBP13.54□□□□□ -0.24
USP13-205ENST00000497380 VIRMAQ69YN4 1812 aaKnown RBP13.54□□□□□ -0.24
USP13-205ENST00000497380 FANCIQ9NVI1 1328 aa13.54□□□□□ -0.24
USP13-205ENST00000497380 PIGBQ92521 554 aa13.53□□□□□ -0.24
USP13-205ENST00000497380 TSR2Q969E8 191 aaKnown RBP13.53□□□□□ -0.24
USP13-205ENST00000497380 ZNF428Q96B54 188 aa13.53□□□□□ -0.24
USP13-205ENST00000497380 MIS18AQ9NYP9 233 aa13.53□□□□□ -0.24
USP13-205ENST00000497380 LRP5O75197 1615 aa13.53□□□□□ -0.24
USP13-205ENST00000497380 KAT6BQ8WYB5 2073 aa13.52□□□□□ -0.24
USP13-205ENST00000497380 HMGB2P26583 209 aaKnown RBP13.52□□□□□ -0.25
USP13-205ENST00000497380 FMNL2Q96PY5 1086 aa13.52□□□□□ -0.25
USP13-205ENST00000497380 BCL11BQ9C0K0 894 aaPredicted RBP13.52□□□□□ -0.25
USP13-205ENST00000497380 HOXB7P09629 217 aa13.51□□□□□ -0.25
USP13-205ENST00000497380 EIF4A1P60842 406 aaKnown RBP13.51□□□□□ -0.25
USP13-205ENST00000497380 EXOSC9Q06265 439 aaKnown RBP13.51□□□□□ -0.25
USP13-205ENST00000497380 BRWD3Q6RI45 1802 aa13.5□□□□□ -0.25
USP13-205ENST00000497380 SIPA1L3O60292 1781 aaPredicted RBP13.5□□□□□ -0.25
USP13-205ENST00000497380 SLC39A6Q13433 755 aa13.5□□□□□ -0.25
USP13-205ENST00000497380 FAM182BQ5T319 152 aa13.5□□□□□ -0.25
USP13-205ENST00000497380 TEX13AQ9BXU3 409 aaPredicted RBP13.5□□□□□ -0.25
USP13-205ENST00000497380 DOT1LQ8TEK3 1739 aa13.5□□□□□ -0.25
USP13-205ENST00000497380 ITGB4P16144 1822 aa13.49□□□□□ -0.25
USP13-205ENST00000497380 SNRPA1P09661 255 aaKnown RBP13.49□□□□□ -0.25
USP13-205ENST00000497380 TWISTNBQ3B726 338 aaPredicted RBP13.49□□□□□ -0.25
USP13-205ENST00000497380 VSIG10Q8N0Z9 540 aa13.49□□□□□ -0.25
USP13-205ENST00000497380 ATG3Q9NT62 314 aa13.49□□□□□ -0.25
USP13-205ENST00000497380 TOGARAM1Q9Y4F4 1720 aa13.49□□□□□ -0.25
USP13-205ENST00000497380 KCNQ2O43526 872 aa13.48□□□□□ -0.25
USP13-205ENST00000497380 ASAP1Q9ULH1 1129 aa13.48□□□□□ -0.25
USP13-205ENST00000497380 KDM3BQ7LBC6 1761 aa13.48□□□□□ -0.25
USP13-205ENST00000497380 PTCD1O75127 700 aaKnown RBP13.47□□□□□ -0.25
USP13-205ENST00000497380 VAMP4O75379 141 aa13.47□□□□□ -0.25
USP13-205ENST00000497380 C8orf58Q8NAV2 365 aa13.47□□□□□ -0.25
USP13-205ENST00000497380 ZNF496Q96IT1 587 aaPredicted RBP13.47□□□□□ -0.25
USP13-205ENST00000497380 RBM42Q9BTD8 480 aaKnown RBP13.47□□□□□ -0.25
USP13-205ENST00000497380 NHSQ6T4R5 1651 aa13.47□□□□□ -0.25
USP13-205ENST00000497380 HEG1Q9ULI3 1381 aa13.46□□□□□ -0.25
USP13-205ENST00000497380 ELL2O00472 640 aaPredicted RBP13.46□□□□□ -0.25
USP13-205ENST00000497380 KCNQ3O43525 872 aa13.46□□□□□ -0.25
USP13-205ENST00000497380 GIGYF1O75420 1035 aaPredicted RBP13.46□□□□□ -0.25
USP13-205ENST00000497380 TRIM37O94972 964 aa13.46□□□□□ -0.25
USP13-205ENST00000497380 ALDH1L2Q3SY69 923 aa13.46□□□□□ -0.25
USP13-205ENST00000497380 CCDC30Q5VVM6 783 aa13.46□□□□□ -0.25
USP13-205ENST00000497380 RCAN3Q9UKA8 241 aa13.46□□□□□ -0.25
USP13-205ENST00000497380 SF3B2Q13435 895 aaKnown RBP13.45□□□□□ -0.26
USP13-205ENST00000497380 STK31Q9BXU1 1019 aa13.45□□□□□ -0.26
USP13-205ENST00000497380 PALLDQ8WX93 1383 aa13.45□□□□□ -0.26
USP13-205ENST00000497380 SBF2Q86WG5 1849 aa13.44□□□□□ -0.26
USP13-205ENST00000497380 PAPPAQ13219 1627 aa13.44□□□□□ -0.26
USP13-205ENST00000497380 STARD3NLO95772 234 aa13.44□□□□□ -0.26
USP13-205ENST00000497380 HDGFL1Q5TGJ6 251 aa13.44□□□□□ -0.26
USP13-205ENST00000497380 TSPYL6Q8N831 410 aa13.44□□□□□ -0.26
USP13-205ENST00000497380 LOC102724428A0A0B4J2F2 783 aa13.43□□□□□ -0.26
USP13-205ENST00000497380 PLSCR1O15162 318 aa13.43□□□□□ -0.26
USP13-205ENST00000497380 ATP6V1AP38606 617 aa13.43□□□□□ -0.26
USP13-205ENST00000497380 SIK1P57059 783 aa13.43□□□□□ -0.26
USP13-205ENST00000497380 KRT24Q2M2I5 525 aa13.43□□□□□ -0.26
USP13-205ENST00000497380 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.43□□□□□ -0.26
USP13-205ENST00000497380 ERBB4Q15303 1308 aa13.42□□□□□ -0.26
USP13-205ENST00000497380 APBA3O96018 575 aa13.42□□□□□ -0.26
USP13-205ENST00000497380 EIF2S2P20042 333 aaKnown RBP13.42□□□□□ -0.26
USP13-205ENST00000497380 RARSP54136 660 aaKnown RBP13.42□□□□□ -0.26
USP13-205ENST00000497380 SLC27A3Q5K4L6 730 aa13.42□□□□□ -0.26
USP13-205ENST00000497380 KCPQ6ZWJ8 1503 aa13.42□□□□□ -0.26
USP13-205ENST00000497380 UBR2Q8IWV8 1755 aa13.42□□□□□ -0.26
USP13-205ENST00000497380 BTAF1O14981 1849 aa13.41□□□□□ -0.26
USP13-205ENST00000497380 SMC4Q9NTJ3 1288 aa13.41□□□□□ -0.26
USP13-205ENST00000497380 DBF4Q9UBU7 674 aaPredicted RBP13.41□□□□□ -0.26
USP13-205ENST00000497380 KIF16BQ96L93 1317 aa13.4□□□□□ -0.26
USP13-205ENST00000497380 IPO8O15397 1037 aaKnown RBP13.4□□□□□ -0.26
USP13-205ENST00000497380 BRPF1P55201 1214 aaPredicted RBP13.4□□□□□ -0.26
USP13-205ENST00000497380 PTF1AQ7RTS3 328 aa13.4□□□□□ -0.26
USP13-205ENST00000497380 NPM2Q86SE8 214 aaKnown RBP13.4□□□□□ -0.26
USP13-205ENST00000497380 HYPKQ9NX55 129 aa13.4□□□□□ -0.26
USP13-205ENST00000497380 CCNL1Q9UK58 526 aaPredicted RBP13.4□□□□□ -0.26
USP13-205ENST00000497380 USP16Q9Y5T5 823 aa13.4□□□□□ -0.26
USP13-205ENST00000497380 SLC4A2P04920 1241 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms