RNA–Protein interactions for RNA: ENST00000497368.1

UBE3C-208, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 2

Gene UBE3C, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-208ENST00000497368 NLRP7Q8WX94 980 aa8.22□□□□□ -1.09
UBE3C-208ENST00000497368 TMEM134Q9H6X4 195 aa8.22□□□□□ -1.09
UBE3C-208ENST00000497368 PRR36Q9H6K5 1346 aa8.22□□□□□ -1.09
UBE3C-208ENST00000497368 NRKQ7Z2Y5 1582 aa8.22□□□□□ -1.09
UBE3C-208ENST00000497368 ANKARQ7Z5J8 1434 aa8.21□□□□□ -1.09
UBE3C-208ENST00000497368 THSD7AQ9UPZ6 1657 aa8.21□□□□□ -1.09
UBE3C-208ENST00000497368 XPCQ01831 940 aaPredicted RBP8.21□□□□□ -1.1
UBE3C-208ENST00000497368 SLF2Q8IX21 1173 aa8.21□□□□□ -1.1
UBE3C-208ENST00000497368 LRRC59Q96AG4 307 aaKnown RBP8.21□□□□□ -1.1
UBE3C-208ENST00000497368 STK26Q9P289 416 aa8.21□□□□□ -1.1
UBE3C-208ENST00000497368 LMO7Q8WWI1 1683 aa8.21□□□□□ -1.1
UBE3C-208ENST00000497368 TNS1Q9HBL0 1735 aaKnown RBP8.2□□□□□ -1.1
UBE3C-208ENST00000497368 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.2□□□□□ -1.1
UBE3C-208ENST00000497368 NYAP1Q6ZVC0 841 aa8.2□□□□□ -1.1
UBE3C-208ENST00000497368 C8orf37Q96NL8 207 aa8.2□□□□□ -1.1
UBE3C-208ENST00000497368 COL14A1Q05707 1796 aaKnown RBP8.2□□□□□ -1.1
UBE3C-208ENST00000497368 WNK3Q9BYP7 1800 aa8.19□□□□□ -1.1
UBE3C-208ENST00000497368 RALGAPBQ86X10 1494 aa8.19□□□□□ -1.1
UBE3C-208ENST00000497368 SRCAPQ6ZRS2 3230 aa8.19□□□□□ -1.1
UBE3C-208ENST00000497368 MEX3CQ5U5Q3 659 aaKnown RBP8.19□□□□□ -1.1
UBE3C-208ENST00000497368 ZNF772Q68DY9 489 aaPredicted RBP8.19□□□□□ -1.1
UBE3C-208ENST00000497368 FNBP4Q8N3X1 1017 aaPredicted RBP8.19□□□□□ -1.1
UBE3C-208ENST00000497368 SIRT1Q96EB6 747 aa8.19□□□□□ -1.1
UBE3C-208ENST00000497368 PHOX2BQ99453 314 aa8.19□□□□□ -1.1
UBE3C-208ENST00000497368 SPATA31A3Q5VYP0 1347 aa8.19□□□□□ -1.1
UBE3C-208ENST00000497368 NPHP3Q7Z494 1330 aa8.19□□□□□ -1.1
UBE3C-208ENST00000497368 AKAP12Q02952 1782 aa8.18□□□□□ -1.1
UBE3C-208ENST00000497368 FOXO3O43524 673 aa8.18□□□□□ -1.1
UBE3C-208ENST00000497368 ADAMTS2O95450 1211 aa8.18□□□□□ -1.1
UBE3C-208ENST00000497368 APLP1P51693 650 aa8.18□□□□□ -1.1
UBE3C-208ENST00000497368 MAP2K5Q13163 448 aa8.18□□□□□ -1.1
UBE3C-208ENST00000497368 PIK3C2AO00443 1686 aa8.18□□□□□ -1.1
UBE3C-208ENST00000497368 SLC4A3P48751 1232 aa8.17□□□□□ -1.1
UBE3C-208ENST00000497368 ESCO1Q5FWF5 840 aa8.17□□□□□ -1.1
UBE3C-208ENST00000497368 PRAM1Q96QH2 718 aa8.17□□□□□ -1.1
UBE3C-208ENST00000497368 SBNO1A3KN83 1393 aa8.17□□□□□ -1.1
UBE3C-208ENST00000497368 IRF6O14896 467 aa8.16□□□□□ -1.1
UBE3C-208ENST00000497368 RXRBP28702 533 aa8.16□□□□□ -1.1
UBE3C-208ENST00000497368 ZC3H15Q8WU90 426 aaKnown RBP8.16□□□□□ -1.1
UBE3C-208ENST00000497368 COL18A1P39060 1754 aa8.15□□□□□ -1.1
UBE3C-208ENST00000497368 USP54Q70EL1 1684 aa8.15□□□□□ -1.1
UBE3C-208ENST00000497368 ITGBL1O95965 494 aaPredicted RBP8.15□□□□□ -1.1
UBE3C-208ENST00000497368 SLC10A3P09131 477 aa8.15□□□□□ -1.1
UBE3C-208ENST00000497368 RBM6P78332 1123 aaKnown RBP8.15□□□□□ -1.1
UBE3C-208ENST00000497368 SAFB2Q14151 953 aaKnown RBP eCLIP8.15□□□□□ -1.1
UBE3C-208ENST00000497368 CCDC102AQ96A19 550 aa8.15□□□□□ -1.1
UBE3C-208ENST00000497368 MON2Q7Z3U7 1717 aa8.15□□□□□ -1.11
UBE3C-208ENST00000497368 MINK1Q8N4C8 1332 aaPredicted RBP8.14□□□□□ -1.11
UBE3C-208ENST00000497368 HRCP23327 699 aa8.14□□□□□ -1.11
UBE3C-208ENST00000497368 NECTIN2Q92692 538 aa8.14□□□□□ -1.11
UBE3C-208ENST00000497368 QTRT2Q9H974 415 aaKnown RBP8.14□□□□□ -1.11
UBE3C-208ENST00000497368 USP21Q9UK80 565 aa8.14□□□□□ -1.11
UBE3C-208ENST00000497368 RGPD1P0DJD0 1748 aa8.13□□□□□ -1.11
UBE3C-208ENST00000497368 ZMYND10O75800 440 aa8.13□□□□□ -1.11
UBE3C-208ENST00000497368 CFHP08603 1231 aa8.13□□□□□ -1.11
UBE3C-208ENST00000497368 CABLES1Q8TDN4 633 aa8.13□□□□□ -1.11
UBE3C-208ENST00000497368 MTRQ99707 1265 aa8.13□□□□□ -1.11
UBE3C-208ENST00000497368 HIRIP3Q9BW71 556 aaPredicted RBP8.13□□□□□ -1.11
UBE3C-208ENST00000497368 TRAK1Q9UPV9 953 aa8.13□□□□□ -1.11
UBE3C-208ENST00000497368 RREB1Q92766 1687 aa8.13□□□□□ -1.11
UBE3C-208ENST00000497368 SLIT3O75094 1523 aa8.13□□□□□ -1.11
UBE3C-208ENST00000497368 RGPD5Q99666 1765 aa8.12□□□□□ -1.11
UBE3C-208ENST00000497368 PEAK1Q9H792 1746 aa8.12□□□□□ -1.11
UBE3C-208ENST00000497368 POLR3AO14802 1390 aaPredicted RBP8.12□□□□□ -1.11
UBE3C-208ENST00000497368 ACIN1Q9UKV3 1341 aaKnown RBP8.12□□□□□ -1.11
UBE3C-208ENST00000497368 TJAP1Q5JTD0 557 aa8.12□□□□□ -1.11
UBE3C-208ENST00000497368 KRT28Q7Z3Y7 464 aa8.12□□□□□ -1.11
UBE3C-208ENST00000497368 DCAF11Q8TEB1 546 aa8.12□□□□□ -1.11
UBE3C-208ENST00000497368 NGLY1Q96IV0 654 aa8.12□□□□□ -1.11
UBE3C-208ENST00000497368 DAXXQ9UER7 740 aaPredicted RBP8.12□□□□□ -1.11
UBE3C-208ENST00000497368 PARP4Q9UKK3 1724 aaKnown RBP8.12□□□□□ -1.11
UBE3C-208ENST00000497368 LRRC37A3O60309 1634 aa8.11□□□□□ -1.11
UBE3C-208ENST00000497368 DDX11L8A8MPP1 907 aa8.11□□□□□ -1.11
UBE3C-208ENST00000497368 COPS2P61201 443 aa8.11□□□□□ -1.11
UBE3C-208ENST00000497368 KCNC4Q03721 635 aa8.11□□□□□ -1.11
UBE3C-208ENST00000497368 NBPF1Q3BBV0 1214 aa8.11□□□□□ -1.11
UBE3C-208ENST00000497368 IFFO2Q5TF58 517 aa8.11□□□□□ -1.11
UBE3C-208ENST00000497368 BARGINQ6ZT62 677 aa8.11□□□□□ -1.11
UBE3C-208ENST00000497368 KRI1Q8N9T8 703 aaKnown RBP8.11□□□□□ -1.11
UBE3C-208ENST00000497368 PMFBP1Q8TBY8 1022 aa8.11□□□□□ -1.11
UBE3C-208ENST00000497368 TRPC5Q9UL62 973 aaPredicted RBP8.11□□□□□ -1.11
UBE3C-208ENST00000497368 NUP188Q5SRE5 1749 aa8.11□□□□□ -1.11
UBE3C-208ENST00000497368 ARHGEF10O15013 1369 aa8.1□□□□□ -1.11
UBE3C-208ENST00000497368 ATAD2Q6PL18 1390 aa8.1□□□□□ -1.11
UBE3C-208ENST00000497368 WASLO00401 505 aaPredicted RBP8.1□□□□□ -1.11
UBE3C-208ENST00000497368 RDH13Q8NBN7 331 aa8.1□□□□□ -1.11
UBE3C-208ENST00000497368 ZNF516Q92618 1163 aa8.1□□□□□ -1.11
UBE3C-208ENST00000497368 CAMTA1Q9Y6Y1 1673 aa8.1□□□□□ -1.11
UBE3C-208ENST00000497368 SSH2Q76I76 1423 aa8.1□□□□□ -1.11
UBE3C-208ENST00000497368 LRP5O75197 1615 aa8.1□□□□□ -1.11
UBE3C-208ENST00000497368 SBF2Q86WG5 1849 aa8.1□□□□□ -1.11
UBE3C-208ENST00000497368 MDM2Q00987 491 aaPredicted RBP8.09□□□□□ -1.11
UBE3C-208ENST00000497368 UNC5CLQ8IV45 518 aa8.09□□□□□ -1.11
UBE3C-208ENST00000497368 GJD4Q96KN9 370 aaPredicted RBP8.09□□□□□ -1.11
UBE3C-208ENST00000497368 IL21Q9HBE4 155 aa8.09□□□□□ -1.11
UBE3C-208ENST00000497368 PCDHB3Q9Y5E6 796 aa8.09□□□□□ -1.11
UBE3C-208ENST00000497368 EIF3AQ14152 1382 aaKnown RBP8.09□□□□□ -1.12
UBE3C-208ENST00000497368 NFAT5O94916 1531 aa8.08□□□□□ -1.12
UBE3C-208ENST00000497368 KMT5BQ4FZB7 885 aa8.08□□□□□ -1.12
UBE3C-208ENST00000497368 BLOC1S3Q6QNY0 202 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms