RNA–Protein interactions for RNA: ENST00000496358.1

COPS6-210, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 610 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-210ENST00000496358 MYBBP1AQ9BQG0 1328 aaKnown RBP24.47■■□□□ 1.51
COPS6-210ENST00000496358 LOC102724428A0A0B4J2F2 783 aa24.47■■□□□ 1.51
COPS6-210ENST00000496358 YY1P25490 414 aa24.47■■□□□ 1.51
COPS6-210ENST00000496358 SIK1P57059 783 aa24.47■■□□□ 1.51
COPS6-210ENST00000496358 PHACTR3Q96KR7 559 aa24.47■■□□□ 1.51
COPS6-210ENST00000496358 SPON1Q9HCB6 807 aa24.47■■□□□ 1.51
COPS6-210ENST00000496358 TUBGCP6Q96RT7 1819 aa24.47■■□□□ 1.51
COPS6-210ENST00000496358 GNAT3A8MTJ3 354 aa24.45■■□□□ 1.5
COPS6-210ENST00000496358 RBM42Q9BTD8 480 aaKnown RBP24.45■■□□□ 1.5
COPS6-210ENST00000496358 SLC52A2Q9HAB3 445 aa24.45■■□□□ 1.5
COPS6-210ENST00000496358 MAP3K5Q99683 1374 aa24.44■■□□□ 1.5
COPS6-210ENST00000496358 ZBTB7AO95365 584 aa24.44■■□□□ 1.5
COPS6-210ENST00000496358 ATP6V1AP38606 617 aa24.44■■□□□ 1.5
COPS6-210ENST00000496358 ADAMTS7Q9UKP4 1686 aa24.43■■□□□ 1.5
COPS6-210ENST00000496358 C4BP0C0L5 1744 aa24.43■■□□□ 1.5
COPS6-210ENST00000496358 NEFMP07197 916 aa24.42■■□□□ 1.5
COPS6-210ENST00000496358 PRKRIP1Q9H875 184 aaPredicted RBP24.42■■□□□ 1.5
COPS6-210ENST00000496358 PNPLA7Q6ZV29 1317 aa24.41■■□□□ 1.5
COPS6-210ENST00000496358 ATF5Q9Y2D1 282 aaPredicted RBP24.41■■□□□ 1.5
COPS6-210ENST00000496358 MRC1P22897 1456 aa24.4■■□□□ 1.5
COPS6-210ENST00000496358 ITPK1Q13572 414 aa24.4■■□□□ 1.5
COPS6-210ENST00000496358 AK7Q96M32 723 aa24.4■■□□□ 1.5
COPS6-210ENST00000496358 MTFR1LQ9H019 292 aa24.4■■□□□ 1.5
COPS6-210ENST00000496358 PTCD1O75127 700 aaKnown RBP24.39■■□□□ 1.49
COPS6-210ENST00000496358 LINC00116Q8NCU8 138 aa24.39■■□□□ 1.49
COPS6-210ENST00000496358 ZNF831Q5JPB2 1677 aa24.39■■□□□ 1.49
COPS6-210ENST00000496358 MSH5O43196 834 aa24.38■■□□□ 1.49
COPS6-210ENST00000496358 TEFQ10587 303 aa24.38■■□□□ 1.49
COPS6-210ENST00000496358 IL17REQ8NFR9 667 aa24.38■■□□□ 1.49
COPS6-210ENST00000496358 PNNQ9H307 717 aaKnown RBP24.38■■□□□ 1.49
COPS6-210ENST00000496358 PPP1R1BQ9UD71 204 aaPredicted RBP24.38■■□□□ 1.49
COPS6-210ENST00000496358 SLC16A10Q8TF71 515 aa24.37■■□□□ 1.49
COPS6-210ENST00000496358 SLC4A9Q96Q91 983 aa24.37■■□□□ 1.49
COPS6-210ENST00000496358 FLAD1Q8NFF5 587 aa24.36■■□□□ 1.49
COPS6-210ENST00000496358 RTF1Q92541 710 aaKnown RBP24.36■■□□□ 1.49
COPS6-210ENST00000496358 UBR3Q6ZT12 1888 aa24.36■■□□□ 1.49
COPS6-210ENST00000496358 SLC39A6Q13433 755 aa24.35■■□□□ 1.49
COPS6-210ENST00000496358 COL23A1Q86Y22 540 aaPredicted RBP24.35■■□□□ 1.49
COPS6-210ENST00000496358 DLG5Q8TDM6 1919 aa24.34■■□□□ 1.49
COPS6-210ENST00000496358 PLEKHF1Q96S99 279 aa24.34■■□□□ 1.49
COPS6-210ENST00000496358 SIPA1L3O60292 1781 aaPredicted RBP24.34■■□□□ 1.49
COPS6-210ENST00000496358 COL5A3P25940 1745 aaPredicted RBP24.33■■□□□ 1.49
COPS6-210ENST00000496358 MAPK8IP3Q9UPT6 1336 aa24.33■■□□□ 1.48
COPS6-210ENST00000496358 GNPATO15228 680 aa24.32■■□□□ 1.48
COPS6-210ENST00000496358 PHF14O94880 888 aa24.32■■□□□ 1.48
COPS6-210ENST00000496358 PTGER2P43116 358 aa24.32■■□□□ 1.48
COPS6-210ENST00000496358 CEMIPQ8WUJ3 1361 aa24.31■■□□□ 1.48
COPS6-210ENST00000496358 WDR43Q15061 677 aaKnown RBP eCLIP24.31■■□□□ 1.485e-7■■□□□ 13.9
COPS6-210ENST00000496358 MCM10Q7L590 875 aa24.31■■□□□ 1.48
COPS6-210ENST00000496358 TTC5Q8N0Z6 440 aa24.31■■□□□ 1.48
COPS6-210ENST00000496358 HTATSF1O43719 755 aaKnown RBP24.3■■□□□ 1.48
COPS6-210ENST00000496358 TJP1Q07157 1748 aa24.3■■□□□ 1.48
COPS6-210ENST00000496358 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.29■■□□□ 1.48
COPS6-210ENST00000496358 DCAF8L1A6NGE4 600 aa24.29■■□□□ 1.48
COPS6-210ENST00000496358 SSFA2P28290 1259 aa24.29■■□□□ 1.48
COPS6-210ENST00000496358 RC3H1Q5TC82 1133 aaKnown RBP24.29■■□□□ 1.48
COPS6-210ENST00000496358 SMIM5Q71RC9 77 aa24.29■■□□□ 1.48
COPS6-210ENST00000496358 UBR2Q8IWV8 1755 aa24.29■■□□□ 1.48
COPS6-210ENST00000496358 DCTN1Q14203 1278 aa24.28■■□□□ 1.48
COPS6-210ENST00000496358 NFE2L2Q16236 605 aa24.28■■□□□ 1.48
COPS6-210ENST00000496358 AMIGO3Q86WK7 504 aa24.28■■□□□ 1.48
COPS6-210ENST00000496358 SGIP1Q9BQI5 828 aa24.28■■□□□ 1.48
COPS6-210ENST00000496358 MYH14Q7Z406 1995 aaKnown RBP24.28■■□□□ 1.48
COPS6-210ENST00000496358 KCPQ6ZWJ8 1503 aa24.28■■□□□ 1.48
COPS6-210ENST00000496358 CNTNAP4Q9C0A0 1308 aa24.28■■□□□ 1.48
COPS6-210ENST00000496358 CICQ96RK0 1608 aaPredicted RBP24.28■■□□□ 1.48
COPS6-210ENST00000496358 POLD1P28340 1107 aa24.27■■□□□ 1.48
COPS6-210ENST00000496358 RTCBQ9Y3I0 505 aaKnown RBP24.27■■□□□ 1.48
COPS6-210ENST00000496358 COL24A1Q17RW2 1714 aa24.27■■□□□ 1.48
COPS6-210ENST00000496358 BTBD11A6QL63 1104 aa24.26■■□□□ 1.47
COPS6-210ENST00000496358 ZNF790Q6PG37 636 aa24.26■■□□□ 1.47
COPS6-210ENST00000496358 DNAJC10Q8IXB1 793 aa24.26■■□□□ 1.47
COPS6-210ENST00000496358 CRKLP46109 303 aaKnown RBP24.25■■□□□ 1.47
COPS6-210ENST00000496358 ARXQ96QS3 562 aa24.25■■□□□ 1.47
COPS6-210ENST00000496358 ANP32CO43423 234 aa24.24■■□□□ 1.47
COPS6-210ENST00000496358 TRAPPC3LQ5T215 181 aa24.24■■□□□ 1.47
COPS6-210ENST00000496358 MSL1Q68DK7 614 aa24.24■■□□□ 1.47
COPS6-210ENST00000496358 VSIG10Q8N0Z9 540 aa24.24■■□□□ 1.47
COPS6-210ENST00000496358 RPS6KA4O75676 772 aa24.23■■□□□ 1.47
COPS6-210ENST00000496358 CCDC146Q8IYE0 955 aa24.23■■□□□ 1.47
COPS6-210ENST00000496358 ADAMTS8Q9UP79 889 aa24.23■■□□□ 1.47
COPS6-210ENST00000496358 ZNF496Q96IT1 587 aaPredicted RBP24.22■■□□□ 1.47
COPS6-210ENST00000496358 KCNQ3O43525 872 aa24.2■■□□□ 1.46
COPS6-210ENST00000496358 CYP19A1P11511 503 aaPredicted RBP24.2■■□□□ 1.46
COPS6-210ENST00000496358 ADRA2BP18089 450 aa24.2■■□□□ 1.46
COPS6-210ENST00000496358 RIPK4P57078 832 aa24.2■■□□□ 1.46
COPS6-210ENST00000496358 TAF7Q15545 349 aaPredicted RBP24.2■■□□□ 1.46
COPS6-210ENST00000496358 RUNDC1Q96C34 613 aa24.2■■□□□ 1.46
COPS6-210ENST00000496358 FMNL2Q96PY5 1086 aa24.2■■□□□ 1.46
COPS6-210ENST00000496358 CCDC87Q9NVE4 849 aa24.2■■□□□ 1.46
COPS6-210ENST00000496358 HEG1Q9ULI3 1381 aa24.19■■□□□ 1.46
COPS6-210ENST00000496358 INTS5Q6P9B9 1019 aaKnown RBP24.19■■□□□ 1.46
COPS6-210ENST00000496358 ARHGEF1Q92888 912 aaKnown RBP24.19■■□□□ 1.46
COPS6-210ENST00000496358 RFC4P35249 363 aa24.18■■□□□ 1.46
COPS6-210ENST00000496358 TMPOP42166 694 aaKnown RBP24.18■■□□□ 1.46
COPS6-210ENST00000496358 TEX13AQ9BXU3 409 aaPredicted RBP24.18■■□□□ 1.46
COPS6-210ENST00000496358 FHDC1Q9C0D6 1143 aaPredicted RBP24.18■■□□□ 1.46
COPS6-210ENST00000496358 STARD3NLO95772 234 aa24.17■■□□□ 1.46
COPS6-210ENST00000496358 THUMPD2Q9BTF0 503 aaKnown RBP24.17■■□□□ 1.46
COPS6-210ENST00000496358 NEUROD2Q15784 382 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 118.6 ms