RNA–Protein interactions for RNA: ENST00000496309.3

RN7SL564P-201, Transcript of RNA, 7SL, cytoplasmic 564, pseudogene, humanhuman

BASIC

Gene RN7SL564P, Length 250 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL564P-201ENST00000496309 SMARCC1Q92922 1105 aaPredicted RBP18.48■□□□□ 0.55
RN7SL564P-201ENST00000496309 SLC52A2Q9HAB3 445 aa18.48■□□□□ 0.55
RN7SL564P-201ENST00000496309 DLG5Q8TDM6 1919 aa18.48■□□□□ 0.55
RN7SL564P-201ENST00000496309 SIPA1L3O60292 1781 aaPredicted RBP18.47■□□□□ 0.55
RN7SL564P-201ENST00000496309 IL17REQ8NFR9 667 aa18.47■□□□□ 0.55
RN7SL564P-201ENST00000496309 PNNQ9H307 717 aaKnown RBP18.47■□□□□ 0.55
RN7SL564P-201ENST00000496309 TAF1LQ8IZX4 1826 aa18.46■□□□□ 0.55
RN7SL564P-201ENST00000496309 CCDC146Q8IYE0 955 aa18.46■□□□□ 0.55
RN7SL564P-201ENST00000496309 ADAMTS8Q9UP79 889 aa18.46■□□□□ 0.55
RN7SL564P-201ENST00000496309 STK32BQ9NY57 414 aa18.45■□□□□ 0.54
RN7SL564P-201ENST00000496309 CEMIPQ8WUJ3 1361 aa18.44■□□□□ 0.54
RN7SL564P-201ENST00000496309 LOC102724428A0A0B4J2F2 783 aa18.44■□□□□ 0.54
RN7SL564P-201ENST00000496309 SIK1P57059 783 aa18.44■□□□□ 0.54
RN7SL564P-201ENST00000496309 NFE2L2Q16236 605 aa18.44■□□□□ 0.54
RN7SL564P-201ENST00000496309 ZNF827Q17R98 1081 aa18.44■□□□□ 0.54
RN7SL564P-201ENST00000496309 MCM10Q7L590 875 aa18.44■□□□□ 0.54
RN7SL564P-201ENST00000496309 TUBGCP6Q96RT7 1819 aa18.44■□□□□ 0.54
RN7SL564P-201ENST00000496309 TEFQ10587 303 aa18.43■□□□□ 0.54
RN7SL564P-201ENST00000496309 DCTN1Q14203 1278 aa18.43■□□□□ 0.54
RN7SL564P-201ENST00000496309 SLC15A2Q16348 729 aa18.43■□□□□ 0.54
RN7SL564P-201ENST00000496309 RTF1Q92541 710 aaKnown RBP18.43■□□□□ 0.54
RN7SL564P-201ENST00000496309 MRS2Q9HD23 443 aa18.43■□□□□ 0.54
RN7SL564P-201ENST00000496309 ZNF831Q5JPB2 1677 aa18.43■□□□□ 0.54
RN7SL564P-201ENST00000496309 C4BP0C0L5 1744 aa18.43■□□□□ 0.54
RN7SL564P-201ENST00000496309 CASZ1Q86V15 1759 aa18.42■□□□□ 0.54
RN7SL564P-201ENST00000496309 AKT1S1Q96B36 256 aa18.42■□□□□ 0.54
RN7SL564P-201ENST00000496309 RBM42Q9BTD8 480 aaKnown RBP18.42■□□□□ 0.54
RN7SL564P-201ENST00000496309 UBR2Q8IWV8 1755 aa18.42■□□□□ 0.54
RN7SL564P-201ENST00000496309 TJP1Q07157 1748 aa18.41■□□□□ 0.54
RN7SL564P-201ENST00000496309 KCPQ6ZWJ8 1503 aa18.41■□□□□ 0.54
RN7SL564P-201ENST00000496309 PTCD1O75127 700 aaKnown RBP18.41■□□□□ 0.54
RN7SL564P-201ENST00000496309 SLC39A6Q13433 755 aa18.41■□□□□ 0.54
RN7SL564P-201ENST00000496309 RUNDC1Q96C34 613 aa18.41■□□□□ 0.54
RN7SL564P-201ENST00000496309 COL5A3P25940 1745 aaPredicted RBP18.4■□□□□ 0.54
RN7SL564P-201ENST00000496309 QSER1Q2KHR3 1735 aa18.4■□□□□ 0.54
RN7SL564P-201ENST00000496309 HTATSF1O43719 755 aaKnown RBP18.4■□□□□ 0.54
RN7SL564P-201ENST00000496309 ATP6V1AP38606 617 aa18.4■□□□□ 0.54
RN7SL564P-201ENST00000496309 ITPK1Q13572 414 aa18.4■□□□□ 0.54
RN7SL564P-201ENST00000496309 SLC4A9Q96Q91 983 aa18.4■□□□□ 0.54
RN7SL564P-201ENST00000496309 CICQ96RK0 1608 aaPredicted RBP18.4■□□□□ 0.54
RN7SL564P-201ENST00000496309 LINC00116Q8NCU8 138 aa18.39■□□□□ 0.53
RN7SL564P-201ENST00000496309 PDGFDQ9GZP0 370 aaPredicted RBP18.39■□□□□ 0.53
RN7SL564P-201ENST00000496309 RRP7AQ9Y3A4 280 aaKnown RBP18.39■□□□□ 0.53
RN7SL564P-201ENST00000496309 TMPOP42166 694 aaKnown RBP18.38■□□□□ 0.53
RN7SL564P-201ENST00000496309 RIPK4P57078 832 aa18.37■□□□□ 0.53
RN7SL564P-201ENST00000496309 PNISRQ8TF01 805 aaKnown RBP18.37■□□□□ 0.53
RN7SL564P-201ENST00000496309 THUMPD2Q9BTF0 503 aaKnown RBP18.37■□□□□ 0.53
RN7SL564P-201ENST00000496309 TFCP2L1Q9NZI6 479 aa18.37■□□□□ 0.53
RN7SL564P-201ENST00000496309 NEUROD2Q15784 382 aa18.36■□□□□ 0.53
RN7SL564P-201ENST00000496309 UBR3Q6ZT12 1888 aa18.35■□□□□ 0.53
RN7SL564P-201ENST00000496309 PNPLA7Q6ZV29 1317 aa18.35■□□□□ 0.53
RN7SL564P-201ENST00000496309 BTBD11A6QL63 1104 aa18.35■□□□□ 0.53
RN7SL564P-201ENST00000496309 ZNF790Q6PG37 636 aa18.35■□□□□ 0.53
RN7SL564P-201ENST00000496309 TTC5Q8N0Z6 440 aa18.35■□□□□ 0.53
RN7SL564P-201ENST00000496309 LRP5O75197 1615 aa18.34■□□□□ 0.53
RN7SL564P-201ENST00000496309 AK7Q96M32 723 aa18.34■□□□□ 0.53
RN7SL564P-201ENST00000496309 KDM3BQ7LBC6 1761 aa18.34■□□□□ 0.53
RN7SL564P-201ENST00000496309 KCNQ3O43525 872 aa18.33■□□□□ 0.52
RN7SL564P-201ENST00000496309 HMGB2P26583 209 aaKnown RBP18.33■□□□□ 0.52
RN7SL564P-201ENST00000496309 APAF1O14727 1248 aa18.32■□□□□ 0.52
RN7SL564P-201ENST00000496309 LMOD3Q0VAK6 560 aa18.32■□□□□ 0.52
RN7SL564P-201ENST00000496309 AMIGO3Q86WK7 504 aa18.32■□□□□ 0.52
RN7SL564P-201ENST00000496309 DNAJC10Q8IXB1 793 aa18.32■□□□□ 0.52
RN7SL564P-201ENST00000496309 ZNF496Q96IT1 587 aaPredicted RBP18.32■□□□□ 0.52
RN7SL564P-201ENST00000496309 GNPATO15228 680 aa18.31■□□□□ 0.52
RN7SL564P-201ENST00000496309 ZBTB7AO95365 584 aa18.31■□□□□ 0.52
RN7SL564P-201ENST00000496309 TAF7Q15545 349 aaPredicted RBP18.31■□□□□ 0.52
RN7SL564P-201ENST00000496309 DIEXFQ68CQ4 756 aaKnown RBP18.31■□□□□ 0.52
RN7SL564P-201ENST00000496309 SMIM5Q71RC9 77 aa18.31■□□□□ 0.52
RN7SL564P-201ENST00000496309 MIS18AQ9NYP9 233 aa18.31■□□□□ 0.52
RN7SL564P-201ENST00000496309 TRIM35Q9UPQ4 493 aa18.31■□□□□ 0.52
RN7SL564P-201ENST00000496309 SRCAPQ6ZRS2 3230 aa18.3■□□□□ 0.52
RN7SL564P-201ENST00000496309 HEG1Q9ULI3 1381 aa18.3■□□□□ 0.52
RN7SL564P-201ENST00000496309 CNTNAP4Q9C0A0 1308 aa18.3■□□□□ 0.52
RN7SL564P-201ENST00000496309 PHF14O94880 888 aa18.3■□□□□ 0.52
RN7SL564P-201ENST00000496309 SENP3-EIF4A1A0A087X0R7 540 aa18.29■□□□□ 0.52
RN7SL564P-201ENST00000496309 MSH5O43196 834 aa18.29■□□□□ 0.52
RN7SL564P-201ENST00000496309 COL23A1Q86Y22 540 aaPredicted RBP18.29■□□□□ 0.52
RN7SL564P-201ENST00000496309 FAM9BQ8IZU0 186 aa18.29■□□□□ 0.52
RN7SL564P-201ENST00000496309 VSIG10Q8N0Z9 540 aa18.29■□□□□ 0.52
RN7SL564P-201ENST00000496309 FMNL2Q96PY5 1086 aa18.29■□□□□ 0.52
RN7SL564P-201ENST00000496309 MYH14Q7Z406 1995 aaKnown RBP18.28■□□□□ 0.52
RN7SL564P-201ENST00000496309 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.28■□□□□ 0.52
RN7SL564P-201ENST00000496309 CRKLP46109 303 aaKnown RBP18.28■□□□□ 0.52
RN7SL564P-201ENST00000496309 CYP19A1P11511 503 aaPredicted RBP18.27■□□□□ 0.52
RN7SL564P-201ENST00000496309 RC3H1Q5TC82 1133 aaKnown RBP18.27■□□□□ 0.52
RN7SL564P-201ENST00000496309 ATF5Q9Y2D1 282 aaPredicted RBP18.27■□□□□ 0.52
RN7SL564P-201ENST00000496309 C4AP0C0L4 1744 aa18.26■□□□□ 0.51
RN7SL564P-201ENST00000496309 SSFA2P28290 1259 aa18.26■□□□□ 0.51
RN7SL564P-201ENST00000496309 MTFR1LQ9H019 292 aa18.26■□□□□ 0.51
RN7SL564P-201ENST00000496309 SPON1Q9HCB6 807 aa18.26■□□□□ 0.51
RN7SL564P-201ENST00000496309 LAMB4A4D0S4 1761 aa18.25■□□□□ 0.51
RN7SL564P-201ENST00000496309 INTS5Q6P9B9 1019 aaKnown RBP18.25■□□□□ 0.51
RN7SL564P-201ENST00000496309 FLAD1Q8NFF5 587 aa18.25■□□□□ 0.51
RN7SL564P-201ENST00000496309 CCDC87Q9NVE4 849 aa18.25■□□□□ 0.51
RN7SL564P-201ENST00000496309 TSPYL4Q9UJ04 414 aa18.25■□□□□ 0.51
RN7SL564P-201ENST00000496309 RTCBQ9Y3I0 505 aaKnown RBP18.25■□□□□ 0.51
RN7SL564P-201ENST00000496309 COL24A1Q17RW2 1714 aa18.24■□□□□ 0.51
RN7SL564P-201ENST00000496309 PRAMEF22A3QJZ6 481 aa18.24■□□□□ 0.51
RN7SL564P-201ENST00000496309 RPS6KA4O75676 772 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms