RNA–Protein interactions for RNA: ENST00000496143.5

PPM1F-208, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1F, humanhuman

TSL 4

Gene PPM1F, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1F-208ENST00000496143 PNPLA7Q6ZV29 1317 aa28.37■■■□□ 2.13
PPM1F-208ENST00000496143 RNMTO43148 476 aaKnown RBP28.36■■■□□ 2.13
PPM1F-208ENST00000496143 FCHSD2O94868 740 aa28.36■■■□□ 2.13
PPM1F-208ENST00000496143 ATP6V1AP38606 617 aa28.36■■■□□ 2.13
PPM1F-208ENST00000496143 AK7Q96M32 723 aa28.36■■■□□ 2.13
PPM1F-208ENST00000496143 SCN11AQ9UI33 1791 aa28.35■■■□□ 2.13
PPM1F-208ENST00000496143 FLAD1Q8NFF5 587 aa28.35■■■□□ 2.13
PPM1F-208ENST00000496143 SLC52A2Q9HAB3 445 aa28.35■■■□□ 2.13
PPM1F-208ENST00000496143 ATF5Q9Y2D1 282 aaPredicted RBP28.35■■■□□ 2.13
PPM1F-208ENST00000496143 RBM42Q9BTD8 480 aaKnown RBP28.34■■■□□ 2.13
PPM1F-208ENST00000496143 MAP3K5Q99683 1374 aa28.34■■■□□ 2.13
PPM1F-208ENST00000496143 GNAT3A8MTJ3 354 aa28.33■■■□□ 2.13
PPM1F-208ENST00000496143 LGR6Q9HBX8 967 aa28.33■■■□□ 2.13
PPM1F-208ENST00000496143 TAF1LQ8IZX4 1826 aa28.33■■■□□ 2.13
PPM1F-208ENST00000496143 C4BP0C0L5 1744 aa28.32■■■□□ 2.12
PPM1F-208ENST00000496143 NEFMP07197 916 aa28.32■■■□□ 2.12
PPM1F-208ENST00000496143 MRC1P22897 1456 aa28.32■■■□□ 2.12
PPM1F-208ENST00000496143 MSH5O43196 834 aa28.31■■■□□ 2.12
PPM1F-208ENST00000496143 MYBBP1AQ9BQG0 1328 aaKnown RBP28.3■■■□□ 2.12
PPM1F-208ENST00000496143 PTGER2P43116 358 aa28.29■■■□□ 2.12
PPM1F-208ENST00000496143 ITPK1Q13572 414 aa28.29■■■□□ 2.12
PPM1F-208ENST00000496143 LINC00116Q8NCU8 138 aa28.29■■■□□ 2.12
PPM1F-208ENST00000496143 TUBGCP6Q96RT7 1819 aa28.29■■■□□ 2.12
PPM1F-208ENST00000496143 ZNF831Q5JPB2 1677 aa28.29■■■□□ 2.12
PPM1F-208ENST00000496143 ADAMTS7Q9UKP4 1686 aa28.29■■■□□ 2.12
PPM1F-208ENST00000496143 PHACTR3Q96KR7 559 aa28.28■■■□□ 2.12
PPM1F-208ENST00000496143 PTCD1O75127 700 aaKnown RBP28.27■■■□□ 2.12
PPM1F-208ENST00000496143 TEFQ10587 303 aa28.27■■■□□ 2.12
PPM1F-208ENST00000496143 COL23A1Q86Y22 540 aaPredicted RBP28.27■■■□□ 2.12
PPM1F-208ENST00000496143 PNNQ9H307 717 aaKnown RBP28.27■■■□□ 2.12
PPM1F-208ENST00000496143 POLD1P28340 1107 aa28.26■■■□□ 2.11
PPM1F-208ENST00000496143 SSFA2P28290 1259 aa28.25■■■□□ 2.11
PPM1F-208ENST00000496143 GNPATO15228 680 aa28.24■■■□□ 2.11
PPM1F-208ENST00000496143 SLC4A9Q96Q91 983 aa28.24■■■□□ 2.11
PPM1F-208ENST00000496143 SGIP1Q9BQI5 828 aa28.24■■■□□ 2.11
PPM1F-208ENST00000496143 RTF1Q92541 710 aaKnown RBP28.23■■■□□ 2.11
PPM1F-208ENST00000496143 PHF14O94880 888 aa28.22■■■□□ 2.11
PPM1F-208ENST00000496143 RC3H1Q5TC82 1133 aaKnown RBP28.22■■■□□ 2.11
PPM1F-208ENST00000496143 IL17REQ8NFR9 667 aa28.22■■■□□ 2.11
PPM1F-208ENST00000496143 ARXQ96QS3 562 aa28.22■■■□□ 2.11
PPM1F-208ENST00000496143 CNTNAP4Q9C0A0 1308 aa28.21■■■□□ 2.11
PPM1F-208ENST00000496143 VIRMAQ69YN4 1812 aaKnown RBP28.21■■■□□ 2.11
PPM1F-208ENST00000496143 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.21■■■□□ 2.11
PPM1F-208ENST00000496143 ZNF316A6NFI3 1004 aaPredicted RBP28.21■■■□□ 2.11
PPM1F-208ENST00000496143 TTC5Q8N0Z6 440 aa28.21■■■□□ 2.11
PPM1F-208ENST00000496143 RTCBQ9Y3I0 505 aaKnown RBP28.2■■■□□ 2.1
PPM1F-208ENST00000496143 HTATSF1O43719 755 aaKnown RBP28.19■■■□□ 2.1
PPM1F-208ENST00000496143 SLC39A6Q13433 755 aa28.19■■■□□ 2.1
PPM1F-208ENST00000496143 PRKRIP1Q9H875 184 aaPredicted RBP28.19■■■□□ 2.1
PPM1F-208ENST00000496143 CEMIPQ8WUJ3 1361 aa28.19■■■□□ 2.1
PPM1F-208ENST00000496143 UBR3Q6ZT12 1888 aa28.19■■■□□ 2.1
PPM1F-208ENST00000496143 MAPK8IP3Q9UPT6 1336 aa28.18■■■□□ 2.1
PPM1F-208ENST00000496143 CICQ96RK0 1608 aaPredicted RBP28.17■■■□□ 2.1
PPM1F-208ENST00000496143 COL5A3P25940 1745 aaPredicted RBP28.16■■■□□ 2.1
PPM1F-208ENST00000496143 ADRA2BP18089 450 aa28.16■■■□□ 2.1
PPM1F-208ENST00000496143 VSIG10Q8N0Z9 540 aa28.15■■■□□ 2.1
PPM1F-208ENST00000496143 COL24A1Q17RW2 1714 aa28.15■■■□□ 2.1
PPM1F-208ENST00000496143 DCAF8L1A6NGE4 600 aa28.14■■■□□ 2.1
PPM1F-208ENST00000496143 RPS6KA4O75676 772 aa28.14■■■□□ 2.1
PPM1F-208ENST00000496143 CRKLP46109 303 aaKnown RBP28.14■■■□□ 2.1
PPM1F-208ENST00000496143 TRAPPC3LQ5T215 181 aa28.14■■■□□ 2.1
PPM1F-208ENST00000496143 AMIGO3Q86WK7 504 aa28.14■■■□□ 2.1
PPM1F-208ENST00000496143 PLEKHF1Q96S99 279 aa28.14■■■□□ 2.1
PPM1F-208ENST00000496143 FHDC1Q9C0D6 1143 aaPredicted RBP28.14■■■□□ 2.1
PPM1F-208ENST00000496143 KCPQ6ZWJ8 1503 aa28.13■■■□□ 2.09
PPM1F-208ENST00000496143 MSL1Q68DK7 614 aa28.13■■■□□ 2.09
PPM1F-208ENST00000496143 ZNF790Q6PG37 636 aa28.13■■■□□ 2.09
PPM1F-208ENST00000496143 WDR43Q15061 677 aaKnown RBP eCLIP28.12■■■□□ 2.09
PPM1F-208ENST00000496143 TJP1Q07157 1748 aa28.12■■■□□ 2.09
PPM1F-208ENST00000496143 BTBD11A6QL63 1104 aa28.11■■■□□ 2.09
PPM1F-208ENST00000496143 MCM10Q7L590 875 aa28.11■■■□□ 2.09
PPM1F-208ENST00000496143 DNAJC10Q8IXB1 793 aa28.11■■■□□ 2.09
PPM1F-208ENST00000496143 NFE2L2Q16236 605 aa28.1■■■□□ 2.09
PPM1F-208ENST00000496143 SMIM5Q71RC9 77 aa28.1■■■□□ 2.09
PPM1F-208ENST00000496143 SYT17Q9BSW7 474 aa28.1■■■□□ 2.09
PPM1F-208ENST00000496143 SIPA1L3O60292 1781 aaPredicted RBP28.09■■■□□ 2.09
PPM1F-208ENST00000496143 CCDC87Q9NVE4 849 aa28.09■■■□□ 2.09
PPM1F-208ENST00000496143 UBR2Q8IWV8 1755 aa28.09■■■□□ 2.09
PPM1F-208ENST00000496143 RFC4P35249 363 aa28.08■■■□□ 2.09
PPM1F-208ENST00000496143 KLHL34Q8N239 644 aa28.08■■■□□ 2.09
PPM1F-208ENST00000496143 FMNL2Q96PY5 1086 aa28.08■■■□□ 2.09
PPM1F-208ENST00000496143 TEX13AQ9BXU3 409 aaPredicted RBP28.08■■■□□ 2.09
PPM1F-208ENST00000496143 STARD3NLO95772 234 aa28.07■■■□□ 2.08
PPM1F-208ENST00000496143 CYP19A1P11511 503 aaPredicted RBP28.07■■■□□ 2.08
PPM1F-208ENST00000496143 ARHGEF1Q92888 912 aaKnown RBP28.07■■■□□ 2.08
PPM1F-208ENST00000496143 DCTN1Q14203 1278 aa28.06■■■□□ 2.08
PPM1F-208ENST00000496143 ZNF496Q96IT1 587 aaPredicted RBP28.06■■■□□ 2.08
PPM1F-208ENST00000496143 HEG1Q9ULI3 1381 aa28.06■■■□□ 2.08
PPM1F-208ENST00000496143 INTS5Q6P9B9 1019 aaKnown RBP28.05■■■□□ 2.08
PPM1F-208ENST00000496143 NLGN1Q8N2Q7 840 aa28.04■■■□□ 2.08
PPM1F-208ENST00000496143 TAF7Q15545 349 aaPredicted RBP28.03■■■□□ 2.08
PPM1F-208ENST00000496143 PNISRQ8TF01 805 aaKnown RBP28.03■■■□□ 2.08
PPM1F-208ENST00000496143 MYH14Q7Z406 1995 aaKnown RBP28.02■■■□□ 2.08
PPM1F-208ENST00000496143 LMOD3Q0VAK6 560 aa28.02■■■□□ 2.08
PPM1F-208ENST00000496143 RUNDC1Q96C34 613 aa28■■■□□ 2.07
PPM1F-208ENST00000496143 SOS1Q07889 1333 aaPredicted RBP27.99■■■□□ 2.07
PPM1F-208ENST00000496143 RIPK4P57078 832 aa27.99■■■□□ 2.07
PPM1F-208ENST00000496143 DLG5Q8TDM6 1919 aa27.98■■■□□ 2.07
PPM1F-208ENST00000496143 ANP32CO43423 234 aa27.98■■■□□ 2.07
PPM1F-208ENST00000496143 KCNQ3O43525 872 aa27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms