RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 MAPK8IP3Q9UPT6 1336 aa13.03□□□□□ -0.32
CALD1-223ENST00000496024 LOC102724428A0A0B4J2F2 783 aa13.02□□□□□ -0.33
CALD1-223ENST00000496024 PTCD1O75127 700 aaKnown RBP13.02□□□□□ -0.33
CALD1-223ENST00000496024 SIK1P57059 783 aa13.02□□□□□ -0.33
CALD1-223ENST00000496024 TEFQ10587 303 aa13.02□□□□□ -0.33
CALD1-223ENST00000496024 DCTN1Q14203 1278 aa13.02□□□□□ -0.33
CALD1-223ENST00000496024 SLC15A2Q16348 729 aa13.02□□□□□ -0.33
CALD1-223ENST00000496024 ZNF827Q17R98 1081 aa13.02□□□□□ -0.33
CALD1-223ENST00000496024 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.33
CALD1-223ENST00000496024 PLEKHF1Q96S99 279 aa13.02□□□□□ -0.33
CALD1-223ENST00000496024 SLC52A2Q9HAB3 445 aa13.02□□□□□ -0.33
CALD1-223ENST00000496024 ADAMTS8Q9UP79 889 aa13.02□□□□□ -0.33
CALD1-223ENST00000496024 ATP6V1AP38606 617 aa13.01□□□□□ -0.33
CALD1-223ENST00000496024 SLC39A6Q13433 755 aa13.01□□□□□ -0.33
CALD1-223ENST00000496024 MCM10Q7L590 875 aa13.01□□□□□ -0.33
CALD1-223ENST00000496024 DLG5Q8TDM6 1919 aa13.01□□□□□ -0.33
CALD1-223ENST00000496024 NFE2L2Q16236 605 aa13□□□□□ -0.33
CALD1-223ENST00000496024 PDGFDQ9GZP0 370 aaPredicted RBP13□□□□□ -0.33
CALD1-223ENST00000496024 TAF1LQ8IZX4 1826 aa12.99□□□□□ -0.33
CALD1-223ENST00000496024 PAPPAQ13219 1627 aa12.99□□□□□ -0.33
CALD1-223ENST00000496024 ITPK1Q13572 414 aa12.99□□□□□ -0.33
CALD1-223ENST00000496024 AKT1S1Q96B36 256 aa12.99□□□□□ -0.33
CALD1-223ENST00000496024 MRS2Q9HD23 443 aa12.99□□□□□ -0.33
CALD1-223ENST00000496024 TFCP2L1Q9NZI6 479 aa12.99□□□□□ -0.33
CALD1-223ENST00000496024 RRP7AQ9Y3A4 280 aaKnown RBP12.99□□□□□ -0.33
CALD1-223ENST00000496024 C5P01031 1676 aa12.99□□□□□ -0.33
CALD1-223ENST00000496024 ADAMTS7Q9UKP4 1686 aa12.99□□□□□ -0.33
CALD1-223ENST00000496024 NEUROD2Q15784 382 aa12.98□□□□□ -0.33
CALD1-223ENST00000496024 LINC00116Q8NCU8 138 aa12.98□□□□□ -0.33
CALD1-223ENST00000496024 SLC4A9Q96Q91 983 aa12.98□□□□□ -0.33
CALD1-223ENST00000496024 MRC1P22897 1456 aa12.97□□□□□ -0.33
CALD1-223ENST00000496024 MSH5O43196 834 aa12.97□□□□□ -0.33
CALD1-223ENST00000496024 TMPOP42166 694 aaKnown RBP12.97□□□□□ -0.33
CALD1-223ENST00000496024 RIPK4P57078 832 aa12.97□□□□□ -0.33
CALD1-223ENST00000496024 RUNDC1Q96C34 613 aa12.97□□□□□ -0.33
CALD1-223ENST00000496024 AK7Q96M32 723 aa12.97□□□□□ -0.33
CALD1-223ENST00000496024 THUMPD2Q9BTF0 503 aaKnown RBP12.97□□□□□ -0.33
CALD1-223ENST00000496024 TUBGCP6Q96RT7 1819 aa12.97□□□□□ -0.33
CALD1-223ENST00000496024 CEMIPQ8WUJ3 1361 aa12.96□□□□□ -0.33
CALD1-223ENST00000496024 SENP3-EIF4A1A0A087X0R7 540 aa12.96□□□□□ -0.33
CALD1-223ENST00000496024 BTBD11A6QL63 1104 aa12.96□□□□□ -0.33
CALD1-223ENST00000496024 ZBTB7AO95365 584 aa12.96□□□□□ -0.33
CALD1-223ENST00000496024 SMIM5Q71RC9 77 aa12.96□□□□□ -0.33
CALD1-223ENST00000496024 TTC5Q8N0Z6 440 aa12.96□□□□□ -0.33
CALD1-223ENST00000496024 SRCAPQ6ZRS2 3230 aa12.96□□□□□ -0.33
CALD1-223ENST00000496024 C4BP0C0L5 1744 aa12.96□□□□□ -0.34
CALD1-223ENST00000496024 SIPA1L3O60292 1781 aaPredicted RBP12.95□□□□□ -0.34
CALD1-223ENST00000496024 HTATSF1O43719 755 aaKnown RBP12.95□□□□□ -0.34
CALD1-223ENST00000496024 PHF14O94880 888 aa12.95□□□□□ -0.34
CALD1-223ENST00000496024 MIS18AQ9NYP9 233 aa12.95□□□□□ -0.34
CALD1-223ENST00000496024 PNPLA7Q6ZV29 1317 aa12.94□□□□□ -0.34
CALD1-223ENST00000496024 GNPATO15228 680 aa12.94□□□□□ -0.34
CALD1-223ENST00000496024 KCNQ3O43525 872 aa12.94□□□□□ -0.34
CALD1-223ENST00000496024 ZNF790Q6PG37 636 aa12.94□□□□□ -0.34
CALD1-223ENST00000496024 DNAJC10Q8IXB1 793 aa12.94□□□□□ -0.34
CALD1-223ENST00000496024 ATF5Q9Y2D1 282 aaPredicted RBP12.94□□□□□ -0.34
CALD1-223ENST00000496024 CASZ1Q86V15 1759 aa12.94□□□□□ -0.34
CALD1-223ENST00000496024 HMGB2P26583 209 aaKnown RBP12.93□□□□□ -0.34
CALD1-223ENST00000496024 TAF7Q15545 349 aaPredicted RBP12.93□□□□□ -0.34
CALD1-223ENST00000496024 AMIGO3Q86WK7 504 aa12.93□□□□□ -0.34
CALD1-223ENST00000496024 PNISRQ8TF01 805 aaKnown RBP12.93□□□□□ -0.34
CALD1-223ENST00000496024 KCPQ6ZWJ8 1503 aa12.93□□□□□ -0.34
CALD1-223ENST00000496024 APAF1O14727 1248 aa12.92□□□□□ -0.34
CALD1-223ENST00000496024 COL23A1Q86Y22 540 aaPredicted RBP12.92□□□□□ -0.34
CALD1-223ENST00000496024 FAM9BQ8IZU0 186 aa12.92□□□□□ -0.34
CALD1-223ENST00000496024 ZNF496Q96IT1 587 aaPredicted RBP12.92□□□□□ -0.34
CALD1-223ENST00000496024 SPON1Q9HCB6 807 aa12.92□□□□□ -0.34
CALD1-223ENST00000496024 MYH14Q7Z406 1995 aaKnown RBP12.92□□□□□ -0.34
CALD1-223ENST00000496024 UBR3Q6ZT12 1888 aa12.91□□□□□ -0.34
CALD1-223ENST00000496024 TJP1Q07157 1748 aa12.91□□□□□ -0.34
CALD1-223ENST00000496024 QSER1Q2KHR3 1735 aa12.91□□□□□ -0.34
CALD1-223ENST00000496024 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.91□□□□□ -0.34
CALD1-223ENST00000496024 CRKLP46109 303 aaKnown RBP12.91□□□□□ -0.34
CALD1-223ENST00000496024 LMOD3Q0VAK6 560 aa12.91□□□□□ -0.34
CALD1-223ENST00000496024 FMNL2Q96PY5 1086 aa12.91□□□□□ -0.34
CALD1-223ENST00000496024 UBR2Q8IWV8 1755 aa12.91□□□□□ -0.34
CALD1-223ENST00000496024 COL5A3P25940 1745 aaPredicted RBP12.91□□□□□ -0.34
CALD1-223ENST00000496024 ZNF831Q5JPB2 1677 aa12.9□□□□□ -0.34
CALD1-223ENST00000496024 DIEXFQ68CQ4 756 aaKnown RBP12.9□□□□□ -0.34
CALD1-223ENST00000496024 MSL1Q68DK7 614 aa12.9□□□□□ -0.34
CALD1-223ENST00000496024 MTFR1LQ9H019 292 aa12.9□□□□□ -0.34
CALD1-223ENST00000496024 TRIM35Q9UPQ4 493 aa12.9□□□□□ -0.34
CALD1-223ENST00000496024 RTCBQ9Y3I0 505 aaKnown RBP12.9□□□□□ -0.34
CALD1-223ENST00000496024 LAS1LQ9Y4W2 734 aaKnown RBP12.9□□□□□ -0.34
CALD1-223ENST00000496024 CNTNAP4Q9C0A0 1308 aa12.89□□□□□ -0.35
CALD1-223ENST00000496024 CYP19A1P11511 503 aaPredicted RBP12.89□□□□□ -0.35
CALD1-223ENST00000496024 RC3H1Q5TC82 1133 aaKnown RBP12.89□□□□□ -0.35
CALD1-223ENST00000496024 FLAD1Q8NFF5 587 aa12.89□□□□□ -0.35
CALD1-223ENST00000496024 PPP1R1BQ9UD71 204 aaPredicted RBP12.89□□□□□ -0.35
CALD1-223ENST00000496024 HEG1Q9ULI3 1381 aa12.89□□□□□ -0.35
CALD1-223ENST00000496024 SSFA2P28290 1259 aa12.88□□□□□ -0.35
CALD1-223ENST00000496024 TRAPPC3LQ5T215 181 aa12.88□□□□□ -0.35
CALD1-223ENST00000496024 INTS5Q6P9B9 1019 aaKnown RBP12.88□□□□□ -0.35
CALD1-223ENST00000496024 VSIG10Q8N0Z9 540 aa12.88□□□□□ -0.35
CALD1-223ENST00000496024 CCDC87Q9NVE4 849 aa12.88□□□□□ -0.35
CALD1-223ENST00000496024 TSPYL4Q9UJ04 414 aa12.88□□□□□ -0.35
CALD1-223ENST00000496024 LRP5O75197 1615 aa12.88□□□□□ -0.35
CALD1-223ENST00000496024 PRAMEF22A3QJZ6 481 aa12.87□□□□□ -0.35
CALD1-223ENST00000496024 RPS6KA4O75676 772 aa12.87□□□□□ -0.35
CALD1-223ENST00000496024 STARD3NLO95772 234 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms