RNA–Protein interactions for RNA: ENST00000496000.1

RUNDC3B-208, Transcript of RUN domain containing 3B, humanhuman

TSL 4

Gene RUNDC3B, Length 592 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3B-208ENST00000496000 TRAK1Q9UPV9 953 aa10.59□□□□□ -0.71
RUNDC3B-208ENST00000496000 RTL1A6NKG5 1358 aa10.59□□□□□ -0.71
RUNDC3B-208ENST00000496000 CDK12Q9NYV4 1490 aaPredicted RBP10.59□□□□□ -0.71
RUNDC3B-208ENST00000496000 SETD1BQ9UPS6 1966 aaKnown RBP10.59□□□□□ -0.71
RUNDC3B-208ENST00000496000 A2ML1A8K2U0 1454 aa10.58□□□□□ -0.72
RUNDC3B-208ENST00000496000 LMTK3Q96Q04 1460 aa10.58□□□□□ -0.72
RUNDC3B-208ENST00000496000 NEK4P51957 841 aa10.58□□□□□ -0.72
RUNDC3B-208ENST00000496000 TWISTNBQ3B726 338 aaPredicted RBP10.58□□□□□ -0.72
RUNDC3B-208ENST00000496000 RNF214Q8ND24 703 aa10.58□□□□□ -0.72
RUNDC3B-208ENST00000496000 RBM42Q9BTD8 480 aaKnown RBP10.58□□□□□ -0.72
RUNDC3B-208ENST00000496000 BCL2L12Q9HB09 334 aa10.58□□□□□ -0.72
RUNDC3B-208ENST00000496000 RBM27Q9P2N5 1060 aaKnown RBP10.58□□□□□ -0.72
RUNDC3B-208ENST00000496000 EID1Q9Y6B2 187 aa10.58□□□□□ -0.72
RUNDC3B-208ENST00000496000 CCDC171Q6TFL3 1326 aa10.58□□□□□ -0.72
RUNDC3B-208ENST00000496000 SPATA31D1Q6ZQQ2 1576 aa10.57□□□□□ -0.72
RUNDC3B-208ENST00000496000 SDSP20132 328 aa10.57□□□□□ -0.72
RUNDC3B-208ENST00000496000 HOXD11P31277 338 aaPredicted RBP10.57□□□□□ -0.72
RUNDC3B-208ENST00000496000 CCT4P50991 539 aaKnown RBP10.57□□□□□ -0.72
RUNDC3B-208ENST00000496000 HDGFP51858 240 aaKnown RBP10.57□□□□□ -0.72
RUNDC3B-208ENST00000496000 CBX1P83916 185 aa10.57□□□□□ -0.72
RUNDC3B-208ENST00000496000 SLC20A2Q08357 652 aa10.57□□□□□ -0.72
RUNDC3B-208ENST00000496000 KRT222Q8N1A0 295 aa10.57□□□□□ -0.72
RUNDC3B-208ENST00000496000 KIAA1524Q8TCG1 905 aa10.57□□□□□ -0.72
RUNDC3B-208ENST00000496000 ZSCAN31Q96LW9 406 aaPredicted RBP10.57□□□□□ -0.72
RUNDC3B-208ENST00000496000 DNAJC2Q99543 621 aaKnown RBP10.57□□□□□ -0.72
RUNDC3B-208ENST00000496000 CHMP4AQ9BY43 222 aa10.57□□□□□ -0.72
RUNDC3B-208ENST00000496000 ZHX1Q9UKY1 873 aaPredicted RBP10.57□□□□□ -0.72
RUNDC3B-208ENST00000496000 PPLO60437 1756 aa10.57□□□□□ -0.72
RUNDC3B-208ENST00000496000 SOS1Q07889 1333 aaPredicted RBP10.57□□□□□ -0.72
RUNDC3B-208ENST00000496000 UGGT1Q9NYU2 1555 aa10.56□□□□□ -0.72
RUNDC3B-208ENST00000496000 CEP170BQ9Y4F5 1589 aaPredicted RBP10.56□□□□□ -0.72
RUNDC3B-208ENST00000496000 ARHGEF10O15013 1369 aa10.56□□□□□ -0.72
RUNDC3B-208ENST00000496000 KIAA0232Q92628 1395 aa10.56□□□□□ -0.72
RUNDC3B-208ENST00000496000 SLFNL1Q499Z3 407 aa10.56□□□□□ -0.72
RUNDC3B-208ENST00000496000 ANKLE2Q86XL3 938 aa10.56□□□□□ -0.72
RUNDC3B-208ENST00000496000 CCDC112Q8NEF3 446 aa10.56□□□□□ -0.72
RUNDC3B-208ENST00000496000 TULP4Q9NRJ4 1543 aa10.56□□□□□ -0.72
RUNDC3B-208ENST00000496000 A0A1W2PP64 1363 aa10.55□□□□□ -0.72
RUNDC3B-208ENST00000496000 NEXMIFQ5QGS0 1516 aa10.55□□□□□ -0.72
RUNDC3B-208ENST00000496000 ZNF853P0CG23 659 aa10.55□□□□□ -0.72
RUNDC3B-208ENST00000496000 PDCP20941 246 aa10.55□□□□□ -0.72
RUNDC3B-208ENST00000496000 SRPK2P78362 688 aaKnown RBP10.55□□□□□ -0.72
RUNDC3B-208ENST00000496000 ZGPATQ8N5A5 531 aaKnown RBP10.55□□□□□ -0.72
RUNDC3B-208ENST00000496000 FAM200AQ8TCP9 573 aa10.55□□□□□ -0.72
RUNDC3B-208ENST00000496000 TIGD1Q96MW7 591 aa10.55□□□□□ -0.72
RUNDC3B-208ENST00000496000 PRDM10Q9NQV6 1147 aa10.55□□□□□ -0.72
RUNDC3B-208ENST00000496000 SH2B1Q9NRF2 756 aaPredicted RBP10.55□□□□□ -0.72
RUNDC3B-208ENST00000496000 ZDHHC9Q9Y397 364 aa10.55□□□□□ -0.72
RUNDC3B-208ENST00000496000 ATP7BP35670 1465 aa10.55□□□□□ -0.72
RUNDC3B-208ENST00000496000 LRRC7Q96NW7 1537 aa10.54□□□□□ -0.72
RUNDC3B-208ENST00000496000 CCP110O43303 1012 aa10.54□□□□□ -0.72
RUNDC3B-208ENST00000496000 PLEKHG5O94827 1062 aa10.54□□□□□ -0.72
RUNDC3B-208ENST00000496000 ZSCAN22P10073 491 aaPredicted RBP10.54□□□□□ -0.72
RUNDC3B-208ENST00000496000 PRKAR2BP31323 418 aa10.54□□□□□ -0.72
RUNDC3B-208ENST00000496000 TEX35Q5T0J7 233 aa10.54□□□□□ -0.72
RUNDC3B-208ENST00000496000 CEP85Q6P2H3 762 aa10.54□□□□□ -0.72
RUNDC3B-208ENST00000496000 ZNF397Q8NF99 534 aaPredicted RBP10.54□□□□□ -0.72
RUNDC3B-208ENST00000496000 RTF1Q92541 710 aaKnown RBP10.54□□□□□ -0.72
RUNDC3B-208ENST00000496000 ESYT1Q9BSJ8 1104 aa10.54□□□□□ -0.72
RUNDC3B-208ENST00000496000 AATKQ6ZMQ8 1374 aa10.53□□□□□ -0.72
RUNDC3B-208ENST00000496000 GNAI3P08754 354 aa10.53□□□□□ -0.72
RUNDC3B-208ENST00000496000 CDC25BP30305 580 aa10.53□□□□□ -0.72
RUNDC3B-208ENST00000496000 USP48Q86UV5 1035 aa10.53□□□□□ -0.72
RUNDC3B-208ENST00000496000 ZNF710Q8N1W2 664 aa10.53□□□□□ -0.72
RUNDC3B-208ENST00000496000 RUFY2Q8WXA3 655 aa10.53□□□□□ -0.72
RUNDC3B-208ENST00000496000 DDX19AQ9NUU7 478 aaKnown RBP10.53□□□□□ -0.72
RUNDC3B-208ENST00000496000 RNF216Q9NWF9 866 aaPredicted RBP10.53□□□□□ -0.72
RUNDC3B-208ENST00000496000 SMC3Q9UQE7 1217 aa10.53□□□□□ -0.72
RUNDC3B-208ENST00000496000 ARHGEF28Q8N1W1 1705 aaKnown RBP10.53□□□□□ -0.72
RUNDC3B-208ENST00000496000 RIMS2Q9UQ26 1411 aa10.52□□□□□ -0.73
RUNDC3B-208ENST00000496000 A0A0U1RQG5 324 aaPredicted RBP10.52□□□□□ -0.73
RUNDC3B-208ENST00000496000 RIOK3O14730 519 aaKnown RBP10.52□□□□□ -0.73
RUNDC3B-208ENST00000496000 TPM1P09493 284 aa10.52□□□□□ -0.73
RUNDC3B-208ENST00000496000 PDE1AP54750 535 aa10.52□□□□□ -0.73
RUNDC3B-208ENST00000496000 IDI1Q13907 227 aa10.52□□□□□ -0.73
RUNDC3B-208ENST00000496000 MAP3K11Q16584 847 aa10.52□□□□□ -0.73
RUNDC3B-208ENST00000496000 SIRT2Q8IXJ6 389 aa10.52□□□□□ -0.73
RUNDC3B-208ENST00000496000 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.52□□□□□ -0.73
RUNDC3B-208ENST00000496000 CHMP4CQ96CF2 233 aa10.52□□□□□ -0.73
RUNDC3B-208ENST00000496000 ARGLU1Q9NWB6 273 aaPredicted RBP10.52□□□□□ -0.73
RUNDC3B-208ENST00000496000 MORC2Q9Y6X9 1032 aaPredicted RBP10.52□□□□□ -0.73
RUNDC3B-208ENST00000496000 ZNF142P52746 1687 aaPredicted RBP10.52□□□□□ -0.73
RUNDC3B-208ENST00000496000 ELP1O95163 1332 aa10.52□□□□□ -0.73
RUNDC3B-208ENST00000496000 RPAP1Q9BWH6 1393 aaPredicted RBP10.52□□□□□ -0.73
RUNDC3B-208ENST00000496000 ATP10DQ9P241 1426 aa10.51□□□□□ -0.73
RUNDC3B-208ENST00000496000 GOLGA6L4A6NEF3 574 aa10.51□□□□□ -0.73
RUNDC3B-208ENST00000496000 KRT85P78386 507 aa10.51□□□□□ -0.73
RUNDC3B-208ENST00000496000 GPS2Q13227 327 aa10.51□□□□□ -0.73
RUNDC3B-208ENST00000496000 ERO1AQ96HE7 468 aa10.51□□□□□ -0.73
RUNDC3B-208ENST00000496000 LRRCC1Q9C099 1032 aa10.51□□□□□ -0.73
RUNDC3B-208ENST00000496000 C1orf115Q9H7X2 142 aa10.51□□□□□ -0.73
RUNDC3B-208ENST00000496000 DDX41Q9UJV9 622 aaKnown RBP10.51□□□□□ -0.73
RUNDC3B-208ENST00000496000 LIMCH1Q9UPQ0 1083 aa10.51□□□□□ -0.73
RUNDC3B-208ENST00000496000 FYB1O15117 783 aa10.5□□□□□ -0.73
RUNDC3B-208ENST00000496000 STX6O43752 255 aa10.5□□□□□ -0.73
RUNDC3B-208ENST00000496000 RAB11FIP3O75154 756 aa10.5□□□□□ -0.73
RUNDC3B-208ENST00000496000 F13A1P00488 732 aa10.5□□□□□ -0.73
RUNDC3B-208ENST00000496000 GNAI2P04899 355 aa10.5□□□□□ -0.73
RUNDC3B-208ENST00000496000 HCLS1P14317 486 aaPredicted RBP10.5□□□□□ -0.73
RUNDC3B-208ENST00000496000 PDE4CQ08493 712 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms