RNA–Protein interactions for RNA: ENST00000495953.2

RAPGEF3-215, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-215ENST00000495953 CABP4P57796 275 aa20.26■□□□□ 0.83
RAPGEF3-215ENST00000495953 CALD1Q05682 793 aaKnown RBP20.26■□□□□ 0.83
RAPGEF3-215ENST00000495953 TEFQ10587 303 aa20.26■□□□□ 0.83
RAPGEF3-215ENST00000495953 MCM10Q7L590 875 aa20.26■□□□□ 0.83
RAPGEF3-215ENST00000495953 SLC52A2Q9HAB3 445 aa20.25■□□□□ 0.83
RAPGEF3-215ENST00000495953 BTAF1O14981 1849 aa20.25■□□□□ 0.83
RAPGEF3-215ENST00000495953 KCNQ2O43526 872 aa20.24■□□□□ 0.83
RAPGEF3-215ENST00000495953 PRIM1P49642 420 aaKnown RBP20.24■□□□□ 0.83
RAPGEF3-215ENST00000495953 WWC1Q8IX03 1113 aa20.24■□□□□ 0.83
RAPGEF3-215ENST00000495953 ACSBG1Q96GR2 724 aa20.24■□□□□ 0.83
RAPGEF3-215ENST00000495953 BCL11BQ9C0K0 894 aaPredicted RBP20.24■□□□□ 0.83
RAPGEF3-215ENST00000495953 TMOD3Q9NYL9 352 aa20.24■□□□□ 0.83
RAPGEF3-215ENST00000495953 RGPD3A6NKT7 1758 aaPredicted RBP20.23■□□□□ 0.83
RAPGEF3-215ENST00000495953 RGPD4Q7Z3J3 1758 aa20.23■□□□□ 0.83
RAPGEF3-215ENST00000495953 DCTN1Q14203 1278 aa20.23■□□□□ 0.83
RAPGEF3-215ENST00000495953 WDR63Q8IWG1 891 aa20.23■□□□□ 0.83
RAPGEF3-215ENST00000495953 LRP5O75197 1615 aa20.23■□□□□ 0.83
RAPGEF3-215ENST00000495953 R3HDM1Q15032 1099 aaKnown RBP20.22■□□□□ 0.83
RAPGEF3-215ENST00000495953 TAF7Q15545 349 aaPredicted RBP20.22■□□□□ 0.83
RAPGEF3-215ENST00000495953 NFATC2IPQ8NCF5 419 aa20.22■□□□□ 0.83
RAPGEF3-215ENST00000495953 SYTL4Q96C24 671 aaPredicted RBP20.22■□□□□ 0.83
RAPGEF3-215ENST00000495953 BABAM1Q9NWV8 329 aa20.22■□□□□ 0.83
RAPGEF3-215ENST00000495953 HNRNPUQ00839 825 aaKnown RBP eCLIP20.21■□□□□ 0.83
RAPGEF3-215ENST00000495953 PIGBQ92521 554 aa20.2■□□□□ 0.82
RAPGEF3-215ENST00000495953 SALL2Q9Y467 1007 aaPredicted RBP20.2■□□□□ 0.82
RAPGEF3-215ENST00000495953 IL16Q14005 1332 aa20.2■□□□□ 0.82
RAPGEF3-215ENST00000495953 THUMPD2Q9BTF0 503 aaKnown RBP20.19■□□□□ 0.82
RAPGEF3-215ENST00000495953 GNAI1P63096 354 aa20.18■□□□□ 0.82
RAPGEF3-215ENST00000495953 SMARCC1Q92922 1105 aaPredicted RBP20.18■□□□□ 0.82
RAPGEF3-215ENST00000495953 ZNF521Q96K83 1311 aa20.18■□□□□ 0.82
RAPGEF3-215ENST00000495953 PAPPAQ13219 1627 aa20.17■□□□□ 0.82
RAPGEF3-215ENST00000495953 CFAP44Q96MT7 982 aa20.17■□□□□ 0.82
RAPGEF3-215ENST00000495953 IFT57Q9NWB7 429 aa20.17■□□□□ 0.82
RAPGEF3-215ENST00000495953 SENP3-EIF4A1A0A087X0R7 540 aa20.16■□□□□ 0.82
RAPGEF3-215ENST00000495953 BTBD11A6QL63 1104 aa20.16■□□□□ 0.82
RAPGEF3-215ENST00000495953 KDM3BQ7LBC6 1761 aa20.16■□□□□ 0.82
RAPGEF3-215ENST00000495953 PROM2Q8N271 834 aa20.15■□□□□ 0.82
RAPGEF3-215ENST00000495953 ZBED9Q6R2W3 1325 aa20.15■□□□□ 0.82
RAPGEF3-215ENST00000495953 UBR2Q8IWV8 1755 aa20.14■□□□□ 0.81
RAPGEF3-215ENST00000495953 CHL1O00533 1208 aa20.14■□□□□ 0.81
RAPGEF3-215ENST00000495953 ZNF853P0CG23 659 aa20.14■□□□□ 0.81
RAPGEF3-215ENST00000495953 GOLGA2Q08379 1002 aa20.14■□□□□ 0.81
RAPGEF3-215ENST00000495953 ANO8Q9HCE9 1232 aaPredicted RBP20.14■□□□□ 0.81
RAPGEF3-215ENST00000495953 PLSCR1O15162 318 aa20.13■□□□□ 0.81
RAPGEF3-215ENST00000495953 ZNF790Q6PG37 636 aa20.13■□□□□ 0.81
RAPGEF3-215ENST00000495953 TTC5Q8N0Z6 440 aa20.13■□□□□ 0.81
RAPGEF3-215ENST00000495953 ATG3Q9NT62 314 aa20.13■□□□□ 0.81
RAPGEF3-215ENST00000495953 LY75O60449 1722 aa20.13■□□□□ 0.81
RAPGEF3-215ENST00000495953 HMGB2P26583 209 aaKnown RBP20.12■□□□□ 0.81
RAPGEF3-215ENST00000495953 TSPYL4Q9UJ04 414 aa20.12■□□□□ 0.81
RAPGEF3-215ENST00000495953 ASAP1Q9ULH1 1129 aa20.12■□□□□ 0.81
RAPGEF3-215ENST00000495953 ZNF831Q5JPB2 1677 aa20.12■□□□□ 0.81
RAPGEF3-215ENST00000495953 LAS1LQ9Y4W2 734 aaKnown RBP20.11■□□□□ 0.81
RAPGEF3-215ENST00000495953 PALLDQ8WX93 1383 aa20.1■□□□□ 0.81
RAPGEF3-215ENST00000495953 E9PSI1 815 aa20.1■□□□□ 0.81
RAPGEF3-215ENST00000495953 NBPF14Q5TI25 921 aa20.1■□□□□ 0.81
RAPGEF3-215ENST00000495953 MYH16Q9H6N6 1097 aa20.1■□□□□ 0.81
RAPGEF3-215ENST00000495953 SLC39A6Q13433 755 aa20.09■□□□□ 0.81
RAPGEF3-215ENST00000495953 MIS18AQ9NYP9 233 aa20.09■□□□□ 0.81
RAPGEF3-215ENST00000495953 CASZ1Q86V15 1759 aa20.08■□□□□ 0.81
RAPGEF3-215ENST00000495953 KCPQ6ZWJ8 1503 aa20.08■□□□□ 0.81
RAPGEF3-215ENST00000495953 TXNRD1Q16881 649 aa20.08■□□□□ 0.81
RAPGEF3-215ENST00000495953 VSIG10Q8N0Z9 540 aa20.08■□□□□ 0.81
RAPGEF3-215ENST00000495953 FMNL2Q96PY5 1086 aa20.08■□□□□ 0.81
RAPGEF3-215ENST00000495953 MBIPQ9NS73 344 aa20.08■□□□□ 0.81
RAPGEF3-215ENST00000495953 CICQ96RK0 1608 aaPredicted RBP20.08■□□□□ 0.8
RAPGEF3-215ENST00000495953 TUBGCP6Q96RT7 1819 aa20.07■□□□□ 0.8
RAPGEF3-215ENST00000495953 SLFN5Q08AF3 891 aa20.07■□□□□ 0.8
RAPGEF3-215ENST00000495953 KCNQ4P56696 695 aa20.06■□□□□ 0.8
RAPGEF3-215ENST00000495953 EIF4A1P60842 406 aaKnown RBP20.06■□□□□ 0.8
RAPGEF3-215ENST00000495953 SLC27A3Q5K4L6 730 aa20.06■□□□□ 0.8
RAPGEF3-215ENST00000495953 PDGFDQ9GZP0 370 aaPredicted RBP20.06■□□□□ 0.8
RAPGEF3-215ENST00000495953 LOC102724428A0A0B4J2F2 783 aa20.05■□□□□ 0.8
RAPGEF3-215ENST00000495953 KCNQ3O43525 872 aa20.05■□□□□ 0.8
RAPGEF3-215ENST00000495953 PTCD1O75127 700 aaKnown RBP20.05■□□□□ 0.8
RAPGEF3-215ENST00000495953 SIK1P57059 783 aa20.05■□□□□ 0.8
RAPGEF3-215ENST00000495953 TRMT2AQ8IZ69 625 aaKnown RBP20.05■□□□□ 0.8
RAPGEF3-215ENST00000495953 ZNF496Q96IT1 587 aaPredicted RBP20.05■□□□□ 0.8
RAPGEF3-215ENST00000495953 RBM42Q9BTD8 480 aaKnown RBP20.05■□□□□ 0.8
RAPGEF3-215ENST00000495953 TEX13AQ9BXU3 409 aaPredicted RBP20.05■□□□□ 0.8
RAPGEF3-215ENST00000495953 HEG1Q9ULI3 1381 aa20.05■□□□□ 0.8
RAPGEF3-215ENST00000495953 SPINK5Q9NQ38 1064 aaPredicted RBP20.04■□□□□ 0.8
RAPGEF3-215ENST00000495953 SOS1Q07889 1333 aaPredicted RBP20.03■□□□□ 0.8
RAPGEF3-215ENST00000495953 FANCIQ9NVI1 1328 aa20.03■□□□□ 0.8
RAPGEF3-215ENST00000495953 SNRPA1P09661 255 aaKnown RBP20.03■□□□□ 0.8
RAPGEF3-215ENST00000495953 YTHDC1Q96MU7 727 aaKnown RBP20.03■□□□□ 0.8
RAPGEF3-215ENST00000495953 LRRC4BQ9NT99 713 aa20.03■□□□□ 0.8
RAPGEF3-215ENST00000495953 TAF1LQ8IZX4 1826 aa20.02■□□□□ 0.8
RAPGEF3-215ENST00000495953 HOXB7P09629 217 aa20.02■□□□□ 0.8
RAPGEF3-215ENST00000495953 ATP6V1AP38606 617 aa20.02■□□□□ 0.8
RAPGEF3-215ENST00000495953 TSR2Q969E8 191 aaKnown RBP20.02■□□□□ 0.8
RAPGEF3-215ENST00000495953 CHMP4AQ9BY43 222 aa20.02■□□□□ 0.8
RAPGEF3-215ENST00000495953 CCNL1Q9UK58 526 aaPredicted RBP20.02■□□□□ 0.8
RAPGEF3-215ENST00000495953 CDCA7LQ96GN5 454 aa20.01■□□□□ 0.79
RAPGEF3-215ENST00000495953 TJP1Q07157 1748 aa20.01■□□□□ 0.79
RAPGEF3-215ENST00000495953 LAMB4A4D0S4 1761 aa20■□□□□ 0.79
RAPGEF3-215ENST00000495953 COL5A3P25940 1745 aaPredicted RBP20■□□□□ 0.79
RAPGEF3-215ENST00000495953 GIGYF1O75420 1035 aaPredicted RBP20■□□□□ 0.79
RAPGEF3-215ENST00000495953 SLC4A9Q96Q91 983 aa20■□□□□ 0.79
RAPGEF3-215ENST00000495953 C5P01031 1676 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms