RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 PRIM1P49642 420 aaKnown RBP25.42■■□□□ 1.66
ATG3-208ENST00000495756 TAF7Q15545 349 aaPredicted RBP25.42■■□□□ 1.66
ATG3-208ENST00000495756 ACSBG1Q96GR2 724 aa25.42■■□□□ 1.66
ATG3-208ENST00000495756 SYTL4Q96C24 671 aaPredicted RBP25.41■■□□□ 1.66
ATG3-208ENST00000495756 IFT57Q9NWB7 429 aa25.41■■□□□ 1.66
ATG3-208ENST00000495756 TMOD3Q9NYL9 352 aa25.41■■□□□ 1.66
ATG3-208ENST00000495756 CFAP44Q96MT7 982 aa25.4■■□□□ 1.66
ATG3-208ENST00000495756 SPINK5Q9NQ38 1064 aaPredicted RBP25.4■■□□□ 1.66
ATG3-208ENST00000495756 LAS1LQ9Y4W2 734 aaKnown RBP25.4■■□□□ 1.66
ATG3-208ENST00000495756 SBF2Q86WG5 1849 aa25.4■■□□□ 1.66
ATG3-208ENST00000495756 ZNF853P0CG23 659 aa25.4■■□□□ 1.66
ATG3-208ENST00000495756 GNAI1P63096 354 aa25.4■■□□□ 1.66
ATG3-208ENST00000495756 CDCA7LQ96GN5 454 aa25.4■■□□□ 1.66
ATG3-208ENST00000495756 NHSQ6T4R5 1651 aa25.39■■□□□ 1.66
ATG3-208ENST00000495756 CHL1O00533 1208 aa25.39■■□□□ 1.65
ATG3-208ENST00000495756 KCNQ2O43526 872 aa25.39■■□□□ 1.65
ATG3-208ENST00000495756 PIGBQ92521 554 aa25.39■■□□□ 1.65
ATG3-208ENST00000495756 BABAM1Q9NWV8 329 aa25.38■■□□□ 1.65
ATG3-208ENST00000495756 MIS18AQ9NYP9 233 aa25.38■■□□□ 1.65
ATG3-208ENST00000495756 BTBD11A6QL63 1104 aa25.37■■□□□ 1.65
ATG3-208ENST00000495756 E9PSI1 815 aa25.37■■□□□ 1.65
ATG3-208ENST00000495756 SLFN5Q08AF3 891 aa25.36■■□□□ 1.65
ATG3-208ENST00000495756 TSPYL4Q9UJ04 414 aa25.36■■□□□ 1.65
ATG3-208ENST00000495756 MYH16Q9H6N6 1097 aa25.35■■□□□ 1.65
ATG3-208ENST00000495756 MBIPQ9NS73 344 aa25.35■■□□□ 1.65
ATG3-208ENST00000495756 KDM3BQ7LBC6 1761 aa25.35■■□□□ 1.65
ATG3-208ENST00000495756 PTF1AQ7RTS3 328 aa25.34■■□□□ 1.65
ATG3-208ENST00000495756 TSR2Q969E8 191 aaKnown RBP25.34■■□□□ 1.65
ATG3-208ENST00000495756 FANCIQ9NVI1 1328 aa25.33■■□□□ 1.65
ATG3-208ENST00000495756 SLC39A6Q13433 755 aa25.33■■□□□ 1.65
ATG3-208ENST00000495756 TRMT2AQ8IZ69 625 aaKnown RBP25.33■■□□□ 1.65
ATG3-208ENST00000495756 BCL11BQ9C0K0 894 aaPredicted RBP25.33■■□□□ 1.65
ATG3-208ENST00000495756 PAPPAQ13219 1627 aa25.33■■□□□ 1.64
ATG3-208ENST00000495756 ZNF790Q6PG37 636 aa25.32■■□□□ 1.64
ATG3-208ENST00000495756 TRIM37O94972 964 aa25.31■■□□□ 1.64
ATG3-208ENST00000495756 ASAP1Q9ULH1 1129 aa25.31■■□□□ 1.64
ATG3-208ENST00000495756 BTAF1O14981 1849 aa25.31■■□□□ 1.64
ATG3-208ENST00000495756 KCNQ3O43525 872 aa25.3■■□□□ 1.64
ATG3-208ENST00000495756 ATG3Q9NT62 314 aa25.3■■□□□ 1.64
ATG3-208ENST00000495756 DUSP27Q5VZP5 1158 aa25.29■■□□□ 1.64
ATG3-208ENST00000495756 TTC5Q8N0Z6 440 aa25.29■■□□□ 1.64
ATG3-208ENST00000495756 UBR2Q8IWV8 1755 aa25.27■■□□□ 1.64
ATG3-208ENST00000495756 EIF4A1P60842 406 aaKnown RBP25.26■■□□□ 1.63
ATG3-208ENST00000495756 KCPQ6ZWJ8 1503 aa25.25■■□□□ 1.63
ATG3-208ENST00000495756 SMARCC1Q92922 1105 aaPredicted RBP25.25■■□□□ 1.63
ATG3-208ENST00000495756 ZNF496Q96IT1 587 aaPredicted RBP25.25■■□□□ 1.63
ATG3-208ENST00000495756 PALLDQ8WX93 1383 aa25.23■■□□□ 1.63
ATG3-208ENST00000495756 PTCD1O75127 700 aaKnown RBP25.23■■□□□ 1.63
ATG3-208ENST00000495756 EXOSC9Q06265 439 aaKnown RBP25.23■■□□□ 1.63
ATG3-208ENST00000495756 FMNL2Q96PY5 1086 aa25.23■■□□□ 1.63
ATG3-208ENST00000495756 HEG1Q9ULI3 1381 aa25.22■■□□□ 1.63
ATG3-208ENST00000495756 TNS1Q9HBL0 1735 aaKnown RBP25.22■■□□□ 1.63
ATG3-208ENST00000495756 KRT24Q2M2I5 525 aa25.22■■□□□ 1.63
ATG3-208ENST00000495756 C8orf58Q8NAV2 365 aa25.21■■□□□ 1.63
ATG3-208ENST00000495756 RBM42Q9BTD8 480 aaKnown RBP25.2■■□□□ 1.62
ATG3-208ENST00000495756 ELL2O00472 640 aaPredicted RBP25.18■■□□□ 1.62
ATG3-208ENST00000495756 GIGYF1O75420 1035 aaPredicted RBP25.18■■□□□ 1.62
ATG3-208ENST00000495756 APBA3O96018 575 aa25.18■■□□□ 1.62
ATG3-208ENST00000495756 TSPYL6Q8N831 410 aa25.18■■□□□ 1.62
ATG3-208ENST00000495756 LY75O60449 1722 aa25.17■■□□□ 1.62
ATG3-208ENST00000495756 LOC102724428A0A0B4J2F2 783 aa25.17■■□□□ 1.62
ATG3-208ENST00000495756 SNRPA1P09661 255 aaKnown RBP25.17■■□□□ 1.62
ATG3-208ENST00000495756 SIK1P57059 783 aa25.17■■□□□ 1.62
ATG3-208ENST00000495756 VSIG10Q8N0Z9 540 aa25.17■■□□□ 1.62
ATG3-208ENST00000495756 SLC4A9Q96Q91 983 aa25.17■■□□□ 1.62
ATG3-208ENST00000495756 TWISTNBQ3B726 338 aaPredicted RBP25.16■■□□□ 1.62
ATG3-208ENST00000495756 SOS1Q07889 1333 aaPredicted RBP25.15■■□□□ 1.62
ATG3-208ENST00000495756 C5P01031 1676 aa25.15■■□□□ 1.62
ATG3-208ENST00000495756 PRAMEF22A3QJZ6 481 aa25.15■■□□□ 1.62
ATG3-208ENST00000495756 PLSCR1O15162 318 aa25.15■■□□□ 1.62
ATG3-208ENST00000495756 HOXB7P09629 217 aa25.15■■□□□ 1.62
ATG3-208ENST00000495756 ZNF831Q5JPB2 1677 aa25.14■■□□□ 1.62
ATG3-208ENST00000495756 VAMP4O75379 141 aa25.14■■□□□ 1.61
ATG3-208ENST00000495756 CT47B1P0C2W7 299 aaPredicted RBP25.13■■□□□ 1.61
ATG3-208ENST00000495756 ATP6V1AP38606 617 aa25.13■■□□□ 1.61
ATG3-208ENST00000495756 TJP1Q07157 1748 aa25.12■■□□□ 1.61
ATG3-208ENST00000495756 CICQ96RK0 1608 aaPredicted RBP25.12■■□□□ 1.61
ATG3-208ENST00000495756 SF3B2Q13435 895 aaKnown RBP25.12■■□□□ 1.61
ATG3-208ENST00000495756 CCDC125Q86Z20 511 aa25.12■■□□□ 1.61
ATG3-208ENST00000495756 DNAJC10Q8IXB1 793 aa25.11■■□□□ 1.61
ATG3-208ENST00000495756 TEX13AQ9BXU3 409 aaPredicted RBP25.11■■□□□ 1.61
ATG3-208ENST00000495756 CCNL1Q9UK58 526 aaPredicted RBP25.11■■□□□ 1.61
ATG3-208ENST00000495756 RGPD3A6NKT7 1758 aaPredicted RBP25.11■■□□□ 1.61
ATG3-208ENST00000495756 RGPD4Q7Z3J3 1758 aa25.11■■□□□ 1.61
ATG3-208ENST00000495756 LAMB4A4D0S4 1761 aa25.1■■□□□ 1.61
ATG3-208ENST00000495756 ITPK1Q13572 414 aa25.1■■□□□ 1.61
ATG3-208ENST00000495756 USP16Q9Y5T5 823 aa25.1■■□□□ 1.61
ATG3-208ENST00000495756 KCNQ4P56696 695 aa25.09■■□□□ 1.61
ATG3-208ENST00000495756 TXNRD1Q16881 649 aa25.09■■□□□ 1.61
ATG3-208ENST00000495756 SLC27A3Q5K4L6 730 aa25.09■■□□□ 1.61
ATG3-208ENST00000495756 HDGFL1Q5TGJ6 251 aa25.09■■□□□ 1.61
ATG3-208ENST00000495756 EIF2S2P20042 333 aaKnown RBP25.08■■□□□ 1.6
ATG3-208ENST00000495756 PROM2Q8N271 834 aa25.08■■□□□ 1.6
ATG3-208ENST00000495756 ZNF428Q96B54 188 aa25.08■■□□□ 1.6
ATG3-208ENST00000495756 STARD3NLO95772 234 aa25.07■■□□□ 1.6
ATG3-208ENST00000495756 BAG6P46379 1132 aa25.07■■□□□ 1.6
ATG3-208ENST00000495756 CHMP4AQ9BY43 222 aa25.07■■□□□ 1.6
ATG3-208ENST00000495756 LRRC4BQ9NT99 713 aa25.07■■□□□ 1.6
ATG3-208ENST00000495756 CYP19A1P11511 503 aaPredicted RBP25.06■■□□□ 1.6
ATG3-208ENST00000495756 NECTIN2Q92692 538 aa25.06■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms