RNA–Protein interactions for RNA: ENST00000495610.6

LCK-213, Transcript of LCK proto-oncogene, Src family tyrosine kinase, humanhuman

TSL 5

Gene LCK, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCK-213ENST00000495610 PAPPAQ13219 1627 aa17.8■□□□□ 0.44
LCK-213ENST00000495610 SIPA1L3O60292 1781 aaPredicted RBP17.79■□□□□ 0.44
LCK-213ENST00000495610 HTATSF1O43719 755 aaKnown RBP17.79■□□□□ 0.44
LCK-213ENST00000495610 TEFQ10587 303 aa17.79■□□□□ 0.44
LCK-213ENST00000495610 MCM10Q7L590 875 aa17.79■□□□□ 0.44
LCK-213ENST00000495610 PROM2Q8N271 834 aa17.79■□□□□ 0.44
LCK-213ENST00000495610 SMARCC1Q92922 1105 aaPredicted RBP17.79■□□□□ 0.44
LCK-213ENST00000495610 ASAP1Q9ULH1 1129 aa17.79■□□□□ 0.44
LCK-213ENST00000495610 CCER2I3L3R5 266 aa17.78■□□□□ 0.44
LCK-213ENST00000495610 TMPOP42166 694 aaKnown RBP17.78■□□□□ 0.44
LCK-213ENST00000495610 DCTN1Q14203 1278 aa17.78■□□□□ 0.44
LCK-213ENST00000495610 ATG3Q9NT62 314 aa17.78■□□□□ 0.44
LCK-213ENST00000495610 RRP7AQ9Y3A4 280 aaKnown RBP17.78■□□□□ 0.44
LCK-213ENST00000495610 RIPK4P57078 832 aa17.77■□□□□ 0.44
LCK-213ENST00000495610 NEUROD2Q15784 382 aa17.76■□□□□ 0.43
LCK-213ENST00000495610 SLC27A3Q5K4L6 730 aa17.76■□□□□ 0.43
LCK-213ENST00000495610 FAM9BQ8IZU0 186 aa17.76■□□□□ 0.43
LCK-213ENST00000495610 CCNL1Q9UK58 526 aaPredicted RBP17.76■□□□□ 0.43
LCK-213ENST00000495610 LMOD3Q0VAK6 560 aa17.75■□□□□ 0.43
LCK-213ENST00000495610 MIER1Q8N108 512 aa17.75■□□□□ 0.43
LCK-213ENST00000495610 LRRC4BQ9NT99 713 aa17.75■□□□□ 0.43
LCK-213ENST00000495610 APAF1O14727 1248 aa17.74■□□□□ 0.43
LCK-213ENST00000495610 KCNQ4P56696 695 aa17.74■□□□□ 0.43
LCK-213ENST00000495610 C5P01031 1676 aa17.74■□□□□ 0.43
LCK-213ENST00000495610 LOC102724428A0A0B4J2F2 783 aa17.73■□□□□ 0.43
LCK-213ENST00000495610 SIK1P57059 783 aa17.73■□□□□ 0.43
LCK-213ENST00000495610 SLC39A6Q13433 755 aa17.73■□□□□ 0.43
LCK-213ENST00000495610 RBM42Q9BTD8 480 aaKnown RBP17.73■□□□□ 0.43
LCK-213ENST00000495610 THUMPD2Q9BTF0 503 aaKnown RBP17.73■□□□□ 0.43
LCK-213ENST00000495610 KCPQ6ZWJ8 1503 aa17.72■□□□□ 0.43
LCK-213ENST00000495610 UBR2Q8IWV8 1755 aa17.72■□□□□ 0.43
LCK-213ENST00000495610 ZNF831Q5JPB2 1677 aa17.72■□□□□ 0.43
LCK-213ENST00000495610 NBPF14Q5TI25 921 aa17.72■□□□□ 0.43
LCK-213ENST00000495610 ANO8Q9HCE9 1232 aaPredicted RBP17.72■□□□□ 0.43
LCK-213ENST00000495610 BTBD11A6QL63 1104 aa17.71■□□□□ 0.43
LCK-213ENST00000495610 PTCD1O75127 700 aaKnown RBP17.71■□□□□ 0.43
LCK-213ENST00000495610 TTC5Q8N0Z6 440 aa17.71■□□□□ 0.43
LCK-213ENST00000495610 TRIM35Q9UPQ4 493 aa17.71■□□□□ 0.43
LCK-213ENST00000495610 TAF1LQ8IZX4 1826 aa17.7■□□□□ 0.42
LCK-213ENST00000495610 CICQ96RK0 1608 aaPredicted RBP17.7■□□□□ 0.42
LCK-213ENST00000495610 ATP6V1AP38606 617 aa17.7■□□□□ 0.42
LCK-213ENST00000495610 TJP1Q07157 1748 aa17.69■□□□□ 0.42
LCK-213ENST00000495610 TAF7Q15545 349 aaPredicted RBP17.69■□□□□ 0.42
LCK-213ENST00000495610 SLC4A9Q96Q91 983 aa17.69■□□□□ 0.42
LCK-213ENST00000495610 STK32BQ9NY57 414 aa17.69■□□□□ 0.42
LCK-213ENST00000495610 C4BP0C0L5 1744 aa17.69■□□□□ 0.42
LCK-213ENST00000495610 KDM3BQ7LBC6 1761 aa17.68■□□□□ 0.42
LCK-213ENST00000495610 SENP3-EIF4A1A0A087X0R7 540 aa17.68■□□□□ 0.42
LCK-213ENST00000495610 COL5A3P25940 1745 aaPredicted RBP17.68■□□□□ 0.42
LCK-213ENST00000495610 ITPK1Q13572 414 aa17.68■□□□□ 0.42
LCK-213ENST00000495610 R3HDM1Q15032 1099 aaKnown RBP17.68■□□□□ 0.42
LCK-213ENST00000495610 ZNF827Q17R98 1081 aa17.68■□□□□ 0.42
LCK-213ENST00000495610 ZNF790Q6PG37 636 aa17.68■□□□□ 0.42
LCK-213ENST00000495610 PSDA5PKW4 1024 aaPredicted RBP17.67■□□□□ 0.42
LCK-213ENST00000495610 SLC15A2Q16348 729 aa17.67■□□□□ 0.42
LCK-213ENST00000495610 LINC00116Q8NCU8 138 aa17.67■□□□□ 0.42
LCK-213ENST00000495610 KCNQ3O43525 872 aa17.66■□□□□ 0.42
LCK-213ENST00000495610 HMGB2P26583 209 aaKnown RBP17.66■□□□□ 0.42
LCK-213ENST00000495610 AKT1S1Q96B36 256 aa17.66■□□□□ 0.42
LCK-213ENST00000495610 MIS18AQ9NYP9 233 aa17.66■□□□□ 0.42
LCK-213ENST00000495610 TUBGCP6Q96RT7 1819 aa17.65■□□□□ 0.42
LCK-213ENST00000495610 ZNF496Q96IT1 587 aaPredicted RBP17.65■□□□□ 0.42
LCK-213ENST00000495610 QSER1Q2KHR3 1735 aa17.64■□□□□ 0.41
LCK-213ENST00000495610 VSIG10Q8N0Z9 540 aa17.64■□□□□ 0.41
LCK-213ENST00000495610 FMNL2Q96PY5 1086 aa17.64■□□□□ 0.41
LCK-213ENST00000495610 HEG1Q9ULI3 1381 aa17.64■□□□□ 0.41
LCK-213ENST00000495610 DNAJC10Q8IXB1 793 aa17.63■□□□□ 0.41
LCK-213ENST00000495610 AK7Q96M32 723 aa17.63■□□□□ 0.41
LCK-213ENST00000495610 TSPYL4Q9UJ04 414 aa17.63■□□□□ 0.41
LCK-213ENST00000495610 CCDC27Q2M243 656 aa17.62■□□□□ 0.41
LCK-213ENST00000495610 NCBP3Q53F19 620 aaKnown RBP17.62■□□□□ 0.41
LCK-213ENST00000495610 BABAM1Q9NWV8 329 aa17.62■□□□□ 0.41
LCK-213ENST00000495610 TFCP2L1Q9NZI6 479 aa17.62■□□□□ 0.41
LCK-213ENST00000495610 SALL2Q9Y467 1007 aaPredicted RBP17.62■□□□□ 0.41
LCK-213ENST00000495610 CASZ1Q86V15 1759 aa17.61■□□□□ 0.41
LCK-213ENST00000495610 CALD1Q05682 793 aaKnown RBP17.61■□□□□ 0.41
LCK-213ENST00000495610 LAS1LQ9Y4W2 734 aaKnown RBP17.61■□□□□ 0.41
LCK-213ENST00000495610 CNTNAP4Q9C0A0 1308 aa17.61■□□□□ 0.41
LCK-213ENST00000495610 WWC1Q8IX03 1113 aa17.6■□□□□ 0.41
LCK-213ENST00000495610 UBR3Q6ZT12 1888 aa17.6■□□□□ 0.41
LCK-213ENST00000495610 LAMB4A4D0S4 1761 aa17.59■□□□□ 0.41
LCK-213ENST00000495610 PNPLA7Q6ZV29 1317 aa17.59■□□□□ 0.41
LCK-213ENST00000495610 GNPATO15228 680 aa17.59■□□□□ 0.41
LCK-213ENST00000495610 CRKLP46109 303 aaKnown RBP17.59■□□□□ 0.41
LCK-213ENST00000495610 CFAP44Q96MT7 982 aa17.59■□□□□ 0.41
LCK-213ENST00000495610 CHL1O00533 1208 aa17.58■□□□□ 0.4
LCK-213ENST00000495610 CYP19A1P11511 503 aaPredicted RBP17.58■□□□□ 0.4
LCK-213ENST00000495610 EIF4A1P60842 406 aaKnown RBP17.58■□□□□ 0.4
LCK-213ENST00000495610 RC3H1Q5TC82 1133 aaKnown RBP17.58■□□□□ 0.4
LCK-213ENST00000495610 TEX13AQ9BXU3 409 aaPredicted RBP17.58■□□□□ 0.4
LCK-213ENST00000495610 IFT57Q9NWB7 429 aa17.58■□□□□ 0.4
LCK-213ENST00000495610 PRAMEF22A3QJZ6 481 aa17.57■□□□□ 0.4
LCK-213ENST00000495610 PHF14O94880 888 aa17.57■□□□□ 0.4
LCK-213ENST00000495610 SNRPA1P09661 255 aaKnown RBP17.57■□□□□ 0.4
LCK-213ENST00000495610 GNAI1P63096 354 aa17.57■□□□□ 0.4
LCK-213ENST00000495610 AMIGO3Q86WK7 504 aa17.57■□□□□ 0.4
LCK-213ENST00000495610 NGEFQ8N5V2 710 aa17.57■□□□□ 0.4
LCK-213ENST00000495610 PDGFDQ9GZP0 370 aaPredicted RBP17.57■□□□□ 0.4
LCK-213ENST00000495610 CCDC87Q9NVE4 849 aa17.57■□□□□ 0.4
LCK-213ENST00000495610 STARD3NLO95772 234 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms