RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 WWC1Q8IX03 1113 aa12.36□□□□□ -0.43
ACTN4-207ENST00000495553 NFATC2IPQ8NCF5 419 aa12.36□□□□□ -0.43
ACTN4-207ENST00000495553 SHANK3Q9BYB0 1731 aa12.36□□□□□ -0.43
ACTN4-207ENST00000495553 KDM6AO15550 1401 aaPredicted RBP12.36□□□□□ -0.43
ACTN4-207ENST00000495553 NHSQ6T4R5 1651 aa12.35□□□□□ -0.43
ACTN4-207ENST00000495553 PALLDQ8WX93 1383 aa12.35□□□□□ -0.43
ACTN4-207ENST00000495553 TNS1Q9HBL0 1735 aaKnown RBP12.35□□□□□ -0.43
ACTN4-207ENST00000495553 HMGB2P26583 209 aaKnown RBP12.35□□□□□ -0.43
ACTN4-207ENST00000495553 TEFQ10587 303 aa12.35□□□□□ -0.43
ACTN4-207ENST00000495553 MYH16Q9H6N6 1097 aa12.35□□□□□ -0.43
ACTN4-207ENST00000495553 SLC52A2Q9HAB3 445 aa12.35□□□□□ -0.43
ACTN4-207ENST00000495553 CCNL1Q9UK58 526 aaPredicted RBP12.35□□□□□ -0.43
ACTN4-207ENST00000495553 ASAP1Q9ULH1 1129 aa12.35□□□□□ -0.43
ACTN4-207ENST00000495553 SENP3-EIF4A1A0A087X0R7 540 aa12.34□□□□□ -0.43
ACTN4-207ENST00000495553 E9PSI1 815 aa12.34□□□□□ -0.43
ACTN4-207ENST00000495553 IL17REQ8NFR9 667 aa12.34□□□□□ -0.43
ACTN4-207ENST00000495553 ATG3Q9NT62 314 aa12.34□□□□□ -0.43
ACTN4-207ENST00000495553 STK32BQ9NY57 414 aa12.34□□□□□ -0.43
ACTN4-207ENST00000495553 IL16Q14005 1332 aa12.34□□□□□ -0.43
ACTN4-207ENST00000495553 R3HDM1Q15032 1099 aaKnown RBP12.33□□□□□ -0.44
ACTN4-207ENST00000495553 LRRC4BQ9NT99 713 aa12.33□□□□□ -0.44
ACTN4-207ENST00000495553 KAT6BQ8WYB5 2073 aa12.33□□□□□ -0.44
ACTN4-207ENST00000495553 SBF2Q86WG5 1849 aa12.32□□□□□ -0.44
ACTN4-207ENST00000495553 DOT1LQ8TEK3 1739 aa12.32□□□□□ -0.44
ACTN4-207ENST00000495553 LOC102724428A0A0B4J2F2 783 aa12.32□□□□□ -0.44
ACTN4-207ENST00000495553 PSDA5PKW4 1024 aaPredicted RBP12.32□□□□□ -0.44
ACTN4-207ENST00000495553 KCNQ4P56696 695 aa12.32□□□□□ -0.44
ACTN4-207ENST00000495553 SIK1P57059 783 aa12.32□□□□□ -0.44
ACTN4-207ENST00000495553 GNAI1P63096 354 aa12.32□□□□□ -0.44
ACTN4-207ENST00000495553 MCM10Q7L590 875 aa12.32□□□□□ -0.44
ACTN4-207ENST00000495553 RBM42Q9BTD8 480 aaKnown RBP12.32□□□□□ -0.44
ACTN4-207ENST00000495553 TRIM35Q9UPQ4 493 aa12.32□□□□□ -0.44
ACTN4-207ENST00000495553 SRCAPQ6ZRS2 3230 aa12.31□□□□□ -0.44
ACTN4-207ENST00000495553 PTCD1O75127 700 aaKnown RBP12.31□□□□□ -0.44
ACTN4-207ENST00000495553 DCTN1Q14203 1278 aa12.31□□□□□ -0.44
ACTN4-207ENST00000495553 IFT57Q9NWB7 429 aa12.31□□□□□ -0.44
ACTN4-207ENST00000495553 LAS1LQ9Y4W2 734 aaKnown RBP12.31□□□□□ -0.44
ACTN4-207ENST00000495553 ATP6V1AP38606 617 aa12.3□□□□□ -0.44
ACTN4-207ENST00000495553 SLC15A2Q16348 729 aa12.3□□□□□ -0.44
ACTN4-207ENST00000495553 TTC5Q8N0Z6 440 aa12.3□□□□□ -0.44
ACTN4-207ENST00000495553 ANO8Q9HCE9 1232 aaPredicted RBP12.3□□□□□ -0.44
ACTN4-207ENST00000495553 BABAM1Q9NWV8 329 aa12.3□□□□□ -0.44
ACTN4-207ENST00000495553 ZNF521Q96K83 1311 aa12.3□□□□□ -0.44
ACTN4-207ENST00000495553 BTAF1O14981 1849 aa12.3□□□□□ -0.44
ACTN4-207ENST00000495553 DLG5Q8TDM6 1919 aa12.29□□□□□ -0.44
ACTN4-207ENST00000495553 BTBD11A6QL63 1104 aa12.29□□□□□ -0.44
ACTN4-207ENST00000495553 SLC39A6Q13433 755 aa12.29□□□□□ -0.44
ACTN4-207ENST00000495553 TAF7Q15545 349 aaPredicted RBP12.29□□□□□ -0.44
ACTN4-207ENST00000495553 CFAP44Q96MT7 982 aa12.29□□□□□ -0.44
ACTN4-207ENST00000495553 TFCP2L1Q9NZI6 479 aa12.29□□□□□ -0.44
ACTN4-207ENST00000495553 CEMIPQ8WUJ3 1361 aa12.29□□□□□ -0.44
ACTN4-207ENST00000495553 TOGARAM1Q9Y4F4 1720 aa12.28□□□□□ -0.44
ACTN4-207ENST00000495553 SLFN5Q08AF3 891 aa12.27□□□□□ -0.45
ACTN4-207ENST00000495553 ZNF827Q17R98 1081 aa12.27□□□□□ -0.45
ACTN4-207ENST00000495553 ZNF790Q6PG37 636 aa12.27□□□□□ -0.45
ACTN4-207ENST00000495553 AKT1S1Q96B36 256 aa12.27□□□□□ -0.45
ACTN4-207ENST00000495553 AK7Q96M32 723 aa12.27□□□□□ -0.45
ACTN4-207ENST00000495553 THUMPD2Q9BTF0 503 aaKnown RBP12.27□□□□□ -0.45
ACTN4-207ENST00000495553 CHMP4AQ9BY43 222 aa12.27□□□□□ -0.45
ACTN4-207ENST00000495553 TSPYL4Q9UJ04 414 aa12.27□□□□□ -0.45
ACTN4-207ENST00000495553 RGPD3A6NKT7 1758 aaPredicted RBP12.26□□□□□ -0.45
ACTN4-207ENST00000495553 RGPD4Q7Z3J3 1758 aa12.26□□□□□ -0.45
ACTN4-207ENST00000495553 ITPK1Q13572 414 aa12.26□□□□□ -0.45
ACTN4-207ENST00000495553 LINC00116Q8NCU8 138 aa12.26□□□□□ -0.45
ACTN4-207ENST00000495553 MRC1P22897 1456 aa12.26□□□□□ -0.45
ACTN4-207ENST00000495553 FMNL2Q96PY5 1086 aa12.25□□□□□ -0.45
ACTN4-207ENST00000495553 SLC4A9Q96Q91 983 aa12.25□□□□□ -0.45
ACTN4-207ENST00000495553 CHL1O00533 1208 aa12.24□□□□□ -0.45
ACTN4-207ENST00000495553 MSH5O43196 834 aa12.24□□□□□ -0.45
ACTN4-207ENST00000495553 CT47B1P0C2W7 299 aaPredicted RBP12.24□□□□□ -0.45
ACTN4-207ENST00000495553 VSIG10Q8N0Z9 540 aa12.24□□□□□ -0.45
ACTN4-207ENST00000495553 RREB1Q92766 1687 aa12.24□□□□□ -0.45
ACTN4-207ENST00000495553 CDCA7LQ96GN5 454 aa12.24□□□□□ -0.45
ACTN4-207ENST00000495553 ZNF496Q96IT1 587 aaPredicted RBP12.24□□□□□ -0.45
ACTN4-207ENST00000495553 MIS18AQ9NYP9 233 aa12.24□□□□□ -0.45
ACTN4-207ENST00000495553 SCN11AQ9UI33 1791 aa12.23□□□□□ -0.45
ACTN4-207ENST00000495553 FANCIQ9NVI1 1328 aa12.23□□□□□ -0.45
ACTN4-207ENST00000495553 GNPATO15228 680 aa12.23□□□□□ -0.45
ACTN4-207ENST00000495553 KCNQ3O43525 872 aa12.23□□□□□ -0.45
ACTN4-207ENST00000495553 STARD3NLO95772 234 aa12.23□□□□□ -0.45
ACTN4-207ENST00000495553 ZNF853P0CG23 659 aa12.23□□□□□ -0.45
ACTN4-207ENST00000495553 DUSP27Q5VZP5 1158 aa12.23□□□□□ -0.45
ACTN4-207ENST00000495553 DNAJC10Q8IXB1 793 aa12.23□□□□□ -0.45
ACTN4-207ENST00000495553 FLAD1Q8NFF5 587 aa12.23□□□□□ -0.45
ACTN4-207ENST00000495553 MBIPQ9NS73 344 aa12.23□□□□□ -0.45
ACTN4-207ENST00000495553 ITGB4P16144 1822 aa12.23□□□□□ -0.45
ACTN4-207ENST00000495553 NUP188Q5SRE5 1749 aa12.23□□□□□ -0.45
ACTN4-207ENST00000495553 SOS1Q07889 1333 aaPredicted RBP12.22□□□□□ -0.45
ACTN4-207ENST00000495553 PHF14O94880 888 aa12.22□□□□□ -0.45
ACTN4-207ENST00000495553 RC3H1Q5TC82 1133 aaKnown RBP12.22□□□□□ -0.45
ACTN4-207ENST00000495553 TRMT2AQ8IZ69 625 aaKnown RBP12.22□□□□□ -0.45
ACTN4-207ENST00000495553 TSR2Q969E8 191 aaKnown RBP12.22□□□□□ -0.45
ACTN4-207ENST00000495553 TEX13AQ9BXU3 409 aaPredicted RBP12.22□□□□□ -0.45
ACTN4-207ENST00000495553 RTCBQ9Y3I0 505 aaKnown RBP12.22□□□□□ -0.45
ACTN4-207ENST00000495553 HEG1Q9ULI3 1381 aa12.21□□□□□ -0.45
ACTN4-207ENST00000495553 PNPLA7Q6ZV29 1317 aa12.21□□□□□ -0.45
ACTN4-207ENST00000495553 CNTNAP4Q9C0A0 1308 aa12.21□□□□□ -0.45
ACTN4-207ENST00000495553 ZBTB7AO95365 584 aa12.21□□□□□ -0.45
ACTN4-207ENST00000495553 SNRPA1P09661 255 aaKnown RBP12.21□□□□□ -0.45
ACTN4-207ENST00000495553 SSFA2P28290 1259 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms