RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 TFCP2L1Q9NZI6 479 aa21.18■□□□□ 0.98
LIME1-209ENST00000494776 MAP3K5Q99683 1374 aa21.18■□□□□ 0.98
LIME1-209ENST00000494776 AKT1S1Q96B36 256 aa21.17■□□□□ 0.98
LIME1-209ENST00000494776 PAPPAQ13219 1627 aa21.16■□□□□ 0.98
LIME1-209ENST00000494776 ATP6V1AP38606 617 aa21.16■□□□□ 0.98
LIME1-209ENST00000494776 RTF1Q92541 710 aaKnown RBP21.15■□□□□ 0.98
LIME1-209ENST00000494776 SCN11AQ9UI33 1791 aa21.15■□□□□ 0.98
LIME1-209ENST00000494776 MAPK8IP3Q9UPT6 1336 aa21.14■□□□□ 0.97
LIME1-209ENST00000494776 TEFQ10587 303 aa21.14■□□□□ 0.97
LIME1-209ENST00000494776 WDR43Q15061 677 aaKnown RBP eCLIP21.14■□□□□ 0.97
LIME1-209ENST00000494776 ANP32CO43423 234 aa21.13■□□□□ 0.97
LIME1-209ENST00000494776 PTCD1O75127 700 aaKnown RBP21.13■□□□□ 0.97
LIME1-209ENST00000494776 PDGFDQ9GZP0 370 aaPredicted RBP21.13■□□□□ 0.97
LIME1-209ENST00000494776 SPON1Q9HCB6 807 aa21.13■□□□□ 0.97
LIME1-209ENST00000494776 ZBTB7AO95365 584 aa21.12■□□□□ 0.97
LIME1-209ENST00000494776 IL17REQ8NFR9 667 aa21.12■□□□□ 0.97
LIME1-209ENST00000494776 AK7Q96M32 723 aa21.12■□□□□ 0.97
LIME1-209ENST00000494776 MSH5O43196 834 aa21.11■□□□□ 0.97
LIME1-209ENST00000494776 C5P01031 1676 aa21.11■□□□□ 0.97
LIME1-209ENST00000494776 ITPK1Q13572 414 aa21.1■□□□□ 0.97
LIME1-209ENST00000494776 LINC00116Q8NCU8 138 aa21.1■□□□□ 0.97
LIME1-209ENST00000494776 PLEKHF1Q96S99 279 aa21.1■□□□□ 0.97
LIME1-209ENST00000494776 MRC1P22897 1456 aa21.09■□□□□ 0.97
LIME1-209ENST00000494776 SLC39A6Q13433 755 aa21.09■□□□□ 0.97
LIME1-209ENST00000494776 TTC5Q8N0Z6 440 aa21.09■□□□□ 0.97
LIME1-209ENST00000494776 ATF5Q9Y2D1 282 aaPredicted RBP21.09■□□□□ 0.97
LIME1-209ENST00000494776 PNPLA7Q6ZV29 1317 aa21.08■□□□□ 0.97
LIME1-209ENST00000494776 HTATSF1O43719 755 aaKnown RBP21.08■□□□□ 0.97
LIME1-209ENST00000494776 MCM10Q7L590 875 aa21.08■□□□□ 0.97
LIME1-209ENST00000494776 PPP1R1BQ9UD71 204 aaPredicted RBP21.08■□□□□ 0.97
LIME1-209ENST00000494776 VIRMAQ69YN4 1812 aaKnown RBP21.07■□□□□ 0.96
LIME1-209ENST00000494776 FLAD1Q8NFF5 587 aa21.07■□□□□ 0.96
LIME1-209ENST00000494776 SLC4A9Q96Q91 983 aa21.07■□□□□ 0.96
LIME1-209ENST00000494776 MTFR1LQ9H019 292 aa21.07■□□□□ 0.96
LIME1-209ENST00000494776 ADAMTS7Q9UKP4 1686 aa21.07■□□□□ 0.96
LIME1-209ENST00000494776 CASZ1Q86V15 1759 aa21.07■□□□□ 0.96
LIME1-209ENST00000494776 C4BP0C0L5 1744 aa21.07■□□□□ 0.96
LIME1-209ENST00000494776 PHF14O94880 888 aa21.06■□□□□ 0.96
LIME1-209ENST00000494776 NFE2L2Q16236 605 aa21.06■□□□□ 0.96
LIME1-209ENST00000494776 TAF1LQ8IZX4 1826 aa21.06■□□□□ 0.96
LIME1-209ENST00000494776 GNPATO15228 680 aa21.05■□□□□ 0.96
LIME1-209ENST00000494776 DCTN1Q14203 1278 aa21.05■□□□□ 0.96
LIME1-209ENST00000494776 CCDC146Q8IYE0 955 aa21.05■□□□□ 0.96
LIME1-209ENST00000494776 SLC16A10Q8TF71 515 aa21.05■□□□□ 0.96
LIME1-209ENST00000494776 ADAMTS8Q9UP79 889 aa21.05■□□□□ 0.96
LIME1-209ENST00000494776 CEMIPQ8WUJ3 1361 aa21.05■□□□□ 0.96
LIME1-209ENST00000494776 BTBD11A6QL63 1104 aa21.04■□□□□ 0.96
LIME1-209ENST00000494776 COL23A1Q86Y22 540 aaPredicted RBP21.04■□□□□ 0.96
LIME1-209ENST00000494776 QSER1Q2KHR3 1735 aa21.02■□□□□ 0.96
LIME1-209ENST00000494776 ZNF790Q6PG37 636 aa21.02■□□□□ 0.96
LIME1-209ENST00000494776 RUNDC1Q96C34 613 aa21.02■□□□□ 0.96
LIME1-209ENST00000494776 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.01■□□□□ 0.95
LIME1-209ENST00000494776 SSFA2P28290 1259 aa21.01■□□□□ 0.95
LIME1-209ENST00000494776 RIPK4P57078 832 aa21.01■□□□□ 0.95
LIME1-209ENST00000494776 RC3H1Q5TC82 1133 aaKnown RBP21.01■□□□□ 0.95
LIME1-209ENST00000494776 RTCBQ9Y3I0 505 aaKnown RBP21.01■□□□□ 0.95
LIME1-209ENST00000494776 TUBGCP6Q96RT7 1819 aa21.01■□□□□ 0.95
LIME1-209ENST00000494776 ZNF831Q5JPB2 1677 aa21■□□□□ 0.95
LIME1-209ENST00000494776 SMIM5Q71RC9 77 aa21■□□□□ 0.95
LIME1-209ENST00000494776 DNAJC10Q8IXB1 793 aa21■□□□□ 0.95
LIME1-209ENST00000494776 CNTNAP4Q9C0A0 1308 aa21■□□□□ 0.95
LIME1-209ENST00000494776 POLD1P28340 1107 aa20.99■□□□□ 0.95
LIME1-209ENST00000494776 TMPOP42166 694 aaKnown RBP20.99■□□□□ 0.95
LIME1-209ENST00000494776 CRKLP46109 303 aaKnown RBP20.99■□□□□ 0.95
LIME1-209ENST00000494776 TAF7Q15545 349 aaPredicted RBP20.99■□□□□ 0.95
LIME1-209ENST00000494776 NEUROD2Q15784 382 aa20.99■□□□□ 0.95
LIME1-209ENST00000494776 VSIG10Q8N0Z9 540 aa20.99■□□□□ 0.95
LIME1-209ENST00000494776 FMNL2Q96PY5 1086 aa20.99■□□□□ 0.95
LIME1-209ENST00000494776 PTGER2P43116 358 aa20.98■□□□□ 0.95
LIME1-209ENST00000494776 LMOD3Q0VAK6 560 aa20.98■□□□□ 0.95
LIME1-209ENST00000494776 CCDC184Q52MB2 194 aa20.98■□□□□ 0.95
LIME1-209ENST00000494776 TRAPPC3LQ5T215 181 aa20.98■□□□□ 0.95
LIME1-209ENST00000494776 AMIGO3Q86WK7 504 aa20.98■□□□□ 0.95
LIME1-209ENST00000494776 ZNF496Q96IT1 587 aaPredicted RBP20.98■□□□□ 0.95
LIME1-209ENST00000494776 MRS2Q9HD23 443 aa20.98■□□□□ 0.95
LIME1-209ENST00000494776 RRP7AQ9Y3A4 280 aaKnown RBP20.98■□□□□ 0.95
LIME1-209ENST00000494776 KCPQ6ZWJ8 1503 aa20.98■□□□□ 0.95
LIME1-209ENST00000494776 RPS6KA4O75676 772 aa20.97■□□□□ 0.95
LIME1-209ENST00000494776 THUMPD2Q9BTF0 503 aaKnown RBP20.97■□□□□ 0.95
LIME1-209ENST00000494776 SIPA1L3O60292 1781 aaPredicted RBP20.96■□□□□ 0.95
LIME1-209ENST00000494776 DCAF8L1A6NGE4 600 aa20.96■□□□□ 0.95
LIME1-209ENST00000494776 KCNQ3O43525 872 aa20.96■□□□□ 0.95
LIME1-209ENST00000494776 MSL1Q68DK7 614 aa20.96■□□□□ 0.95
LIME1-209ENST00000494776 PNISRQ8TF01 805 aaKnown RBP20.96■□□□□ 0.95
LIME1-209ENST00000494776 DLG5Q8TDM6 1919 aa20.96■□□□□ 0.95
LIME1-209ENST00000494776 UBR3Q6ZT12 1888 aa20.95■□□□□ 0.94
LIME1-209ENST00000494776 STARD3NLO95772 234 aa20.95■□□□□ 0.94
LIME1-209ENST00000494776 CYP19A1P11511 503 aaPredicted RBP20.95■□□□□ 0.94
LIME1-209ENST00000494776 TEX13AQ9BXU3 409 aaPredicted RBP20.95■□□□□ 0.94
LIME1-209ENST00000494776 CCDC87Q9NVE4 849 aa20.95■□□□□ 0.94
LIME1-209ENST00000494776 MIS18AQ9NYP9 233 aa20.95■□□□□ 0.94
LIME1-209ENST00000494776 HEG1Q9ULI3 1381 aa20.95■□□□□ 0.94
LIME1-209ENST00000494776 COL5A3P25940 1745 aaPredicted RBP20.95■□□□□ 0.94
LIME1-209ENST00000494776 TJP1Q07157 1748 aa20.95■□□□□ 0.94
LIME1-209ENST00000494776 ADRA2BP18089 450 aa20.94■□□□□ 0.94
LIME1-209ENST00000494776 RFC4P35249 363 aa20.94■□□□□ 0.94
LIME1-209ENST00000494776 ARXQ96QS3 562 aa20.94■□□□□ 0.94
LIME1-209ENST00000494776 INTS5Q6P9B9 1019 aaKnown RBP20.93■□□□□ 0.94
LIME1-209ENST00000494776 ARHGEF1Q92888 912 aaKnown RBP20.93■□□□□ 0.94
LIME1-209ENST00000494776 SGIP1Q9BQI5 828 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms