RNA–Protein interactions for RNA: ENST00000494654.1

MDC1-208, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-208ENST00000494654 RBM25P49756 843 aaKnown RBP3.4□□□□□ -1.87
MDC1-208ENST00000494654 NBPF1Q3BBV0 1214 aa3.4□□□□□ -1.87
MDC1-208ENST00000494654 NBPF8Q3BBV2 869 aa3.4□□□□□ -1.87
MDC1-208ENST00000494654 SPATA31D1Q6ZQQ2 1576 aa3.4□□□□□ -1.87
MDC1-208ENST00000494654 PARP9Q8IXQ6 854 aa3.4□□□□□ -1.87
MDC1-208ENST00000494654 MYRIPQ8NFW9 859 aa3.4□□□□□ -1.87
MDC1-208ENST00000494654 RBM46Q8TBY0 533 aaKnown RBP3.4□□□□□ -1.87
MDC1-208ENST00000494654 L3MBTL2Q969R5 705 aa3.4□□□□□ -1.87
MDC1-208ENST00000494654 GBP4Q96PP9 640 aa3.4□□□□□ -1.87
MDC1-208ENST00000494654 TMUB1Q9BVT8 246 aa3.4□□□□□ -1.87
MDC1-208ENST00000494654 TBC1D2Q9BYX2 928 aa3.4□□□□□ -1.87
MDC1-208ENST00000494654 TSPYL1Q9H0U9 437 aa3.4□□□□□ -1.87
MDC1-208ENST00000494654 PRDM10Q9NQV6 1147 aa3.4□□□□□ -1.87
MDC1-208ENST00000494654 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.4□□□□□ -1.87
MDC1-208ENST00000494654 NOL7Q9UMY1 257 aaKnown RBP3.4□□□□□ -1.87
MDC1-208ENST00000494654 ZKSCAN5Q9Y2L8 839 aa3.4□□□□□ -1.87
MDC1-208ENST00000494654 R3HCC1Q9Y3T6 440 aaKnown RBP3.4□□□□□ -1.87
MDC1-208ENST00000494654 CASZ1Q86V15 1759 aa3.4□□□□□ -1.87
MDC1-208ENST00000494654 CGNL1Q0VF96 1302 aa3.4□□□□□ -1.87
MDC1-208ENST00000494654 MROH2AA6NES4 1674 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 GPRASP1Q5JY77 1395 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 NPC1L1Q9UHC9 1359 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 PLEKHH1Q9ULM0 1364 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 CRYBG1Q9Y4K1 1723 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 ASXL2Q76L83 1435 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 CCDC66A2RUB6 948 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 DNAJB2P25686 324 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 ZNF445P59923 1031 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 IRX3P78415 501 aaPredicted RBP3.39□□□□□ -1.87
MDC1-208ENST00000494654 GABPB1Q06547 395 aaPredicted RBP3.39□□□□□ -1.87
MDC1-208ENST00000494654 PUS10Q3MIT2 529 aaKnown RBP3.39□□□□□ -1.87
MDC1-208ENST00000494654 LAPTM4BQ86VI4 370 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 SKAP1Q86WV1 359 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 CREBRFQ8IUR6 639 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 ANKK1Q8NFD2 765 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 LRCH3Q96II8 777 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 PRIMPOLQ96LW4 560 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 YY1AP1Q9H869 796 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 DEPDC5O75140 1603 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 MYOM2P54296 1465 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 MAGI2Q86UL8 1455 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 ZNF521Q96K83 1311 aa3.39□□□□□ -1.87
MDC1-208ENST00000494654 ARHGEF28Q8N1W1 1705 aaKnown RBP3.39□□□□□ -1.87
MDC1-208ENST00000494654 PPLO60437 1756 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 ABCC5O15440 1437 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 PRAG1Q86YV5 1406 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 OATP04181 439 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 FAM193AP78312 1265 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 HMGN5P82970 282 aaKnown RBP3.38□□□□□ -1.87
MDC1-208ENST00000494654 GUCA2AQ02747 115 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 PDE4DQ08499 809 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 MLECQ14165 292 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 RAB3GAP1Q15042 981 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 KLHL40Q2TBA0 621 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 CLEC17AQ6ZS10 378 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 HSCBQ8IWL3 235 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 ZNF516Q92618 1163 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 AK7Q96M32 723 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 ZNF830Q96NB3 372 aaPredicted RBP3.38□□□□□ -1.87
MDC1-208ENST00000494654 DNAJC2Q99543 621 aaKnown RBP3.38□□□□□ -1.87
MDC1-208ENST00000494654 CCDC39Q9UFE4 941 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 KIF3AQ9Y496 699 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 MED14O60244 1454 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 PLA2R1Q13018 1463 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 WDR7Q9Y4E6 1490 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 TET3O43151 1660 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 MYH13Q9UKX3 1938 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 DISP1Q96F81 1524 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 ATAD2Q6PL18 1390 aa3.38□□□□□ -1.87
MDC1-208ENST00000494654 MAP3K4Q9Y6R4 1608 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 CLTCQ00610 1675 aaKnown RBP3.37□□□□□ -1.87
MDC1-208ENST00000494654 FAM208AQ9UK61 1670 aaKnown RBP3.37□□□□□ -1.87
MDC1-208ENST00000494654 PARP4Q9UKK3 1724 aaKnown RBP3.37□□□□□ -1.87
MDC1-208ENST00000494654 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP3.37□□□□□ -1.87
MDC1-208ENST00000494654 TLL1O43897 1013 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 PLIN1O60240 522 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 CFHP08603 1231 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 COPS2P61201 443 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 KIAA2012Q0VF49 1180 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 TTLL12Q14166 644 aaPredicted RBP3.37□□□□□ -1.87
MDC1-208ENST00000494654 SYCP1Q15431 976 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 AMHR2Q16671 573 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 C20orf194Q5TEA3 1177 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 DUSP27Q5VZP5 1158 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 GIGYF2Q6Y7W6 1299 aaKnown RBP3.37□□□□□ -1.87
MDC1-208ENST00000494654 GAS2L3Q86XJ1 694 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 SMC5Q8IY18 1101 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 NKX2-3Q8TAU0 364 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 SNX21Q969T3 373 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 MPHOSPH9Q99550 1183 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 GZF1Q9H116 711 aaPredicted RBP3.37□□□□□ -1.87
MDC1-208ENST00000494654 PANK3Q9H999 370 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 FAM217BQ9NTX9 383 aaPredicted RBP3.37□□□□□ -1.87
MDC1-208ENST00000494654 TSR3Q9UJK0 312 aaKnown RBP3.37□□□□□ -1.87
MDC1-208ENST00000494654 CDC42BPGQ6DT37 1551 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 VWDEQ8N2E2 1590 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 LAMA4Q16363 1823 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 ECM29Q5VYK3 1845 aa3.37□□□□□ -1.87
MDC1-208ENST00000494654 RIMS1Q86UR5 1692 aaKnown RBP3.36□□□□□ -1.87
MDC1-208ENST00000494654 ERBINQ96RT1 1412 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms