RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 DEFB132Q7Z7B7 95 aa11.93□□□□□ -0.5
ITGB1-217ENST00000494395 IFNL1Q8IU54 200 aa11.93□□□□□ -0.5
ITGB1-217ENST00000494395 DOT1LQ8TEK3 1739 aa11.92□□□□□ -0.5
ITGB1-217ENST00000494395 PLEKHG2Q9H7P9 1386 aa11.92□□□□□ -0.5
ITGB1-217ENST00000494395 NUP188Q5SRE5 1749 aa11.91□□□□□ -0.5
ITGB1-217ENST00000494395 BTAF1O14981 1849 aa11.91□□□□□ -0.5
ITGB1-217ENST00000494395 CD44P16070 742 aaKnown RBP11.91□□□□□ -0.5
ITGB1-217ENST00000494395 MTHFSP49914 203 aa11.91□□□□□ -0.5
ITGB1-217ENST00000494395 PTF1AQ7RTS3 328 aa11.91□□□□□ -0.5
ITGB1-217ENST00000494395 TOGARAM1Q9Y4F4 1720 aa11.91□□□□□ -0.5
ITGB1-217ENST00000494395 IL13P35225 146 aa11.9□□□□□ -0.5
ITGB1-217ENST00000494395 SF3B2Q13435 895 aaKnown RBP11.9□□□□□ -0.5
ITGB1-217ENST00000494395 ZCRB1Q8TBF4 217 aaKnown RBP11.9□□□□□ -0.5
ITGB1-217ENST00000494395 RAPGEF4Q8WZA2 1011 aa11.9□□□□□ -0.5
ITGB1-217ENST00000494395 KDRP35968 1356 aa11.9□□□□□ -0.5
ITGB1-217ENST00000494395 TATP17735 454 aaPredicted RBP11.89□□□□□ -0.51
ITGB1-217ENST00000494395 BAG6P46379 1132 aa11.89□□□□□ -0.51
ITGB1-217ENST00000494395 CAMKK2Q96RR4 588 aa11.89□□□□□ -0.51
ITGB1-217ENST00000494395 PARD3Q8TEW0 1356 aa11.89□□□□□ -0.51
ITGB1-217ENST00000494395 CYP27B1O15528 508 aa11.88□□□□□ -0.51
ITGB1-217ENST00000494395 EN1Q05925 392 aaPredicted RBP11.88□□□□□ -0.51
ITGB1-217ENST00000494395 ITGB4P16144 1822 aa11.88□□□□□ -0.51
ITGB1-217ENST00000494395 KAT6BQ8WYB5 2073 aa11.87□□□□□ -0.51
ITGB1-217ENST00000494395 KCNQ2O43526 872 aa11.87□□□□□ -0.51
ITGB1-217ENST00000494395 APBA3O96018 575 aa11.87□□□□□ -0.51
ITGB1-217ENST00000494395 EZH2Q15910 746 aaKnown RBP11.87□□□□□ -0.51
ITGB1-217ENST00000494395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.87□□□□□ -0.511e-10■■□□□ 11.9
ITGB1-217ENST00000494395 PCDH11XQ9BZA7 1347 aa11.86□□□□□ -0.51
ITGB1-217ENST00000494395 PCDH11YQ9BZA8 1340 aa11.86□□□□□ -0.51
ITGB1-217ENST00000494395 PLSCR1O15162 318 aa11.86□□□□□ -0.51
ITGB1-217ENST00000494395 PPP2R1AP30153 589 aa11.86□□□□□ -0.51
ITGB1-217ENST00000494395 DDX10Q13206 875 aaKnown RBP11.86□□□□□ -0.51
ITGB1-217ENST00000494395 AEBP1Q8IUX7 1158 aa11.86□□□□□ -0.51
ITGB1-217ENST00000494395 DDX54Q8TDD1 881 aaKnown RBP11.86□□□□□ -0.51
ITGB1-217ENST00000494395 CNGB1Q14028 1251 aaPredicted RBP11.85□□□□□ -0.51
ITGB1-217ENST00000494395 ACSBG1Q96GR2 724 aa11.85□□□□□ -0.51
ITGB1-217ENST00000494395 PHF12Q96QT6 1004 aa11.85□□□□□ -0.51
ITGB1-217ENST00000494395 LY75O60449 1722 aa11.85□□□□□ -0.51
ITGB1-217ENST00000494395 DIAPH1O60610 1272 aaKnown RBP11.84□□□□□ -0.51
ITGB1-217ENST00000494395 PAPPAQ13219 1627 aa11.84□□□□□ -0.51
ITGB1-217ENST00000494395 VIRMAQ69YN4 1812 aaKnown RBP11.83□□□□□ -0.51
ITGB1-217ENST00000494395 SULT6B1Q6IMI4 303 aa11.83□□□□□ -0.52
ITGB1-217ENST00000494395 SPG7Q9UQ90 795 aa11.83□□□□□ -0.52
ITGB1-217ENST00000494395 ADAMTS7Q9UKP4 1686 aa11.82□□□□□ -0.52
ITGB1-217ENST00000494395 PHKG2P15735 406 aa11.82□□□□□ -0.52
ITGB1-217ENST00000494395 MFRPQ9BY79 579 aa11.82□□□□□ -0.52
ITGB1-217ENST00000494395 SCN11AQ9UI33 1791 aa11.82□□□□□ -0.52
ITGB1-217ENST00000494395 KDM6AO15550 1401 aaPredicted RBP11.81□□□□□ -0.52
ITGB1-217ENST00000494395 PRIM1P49642 420 aaKnown RBP11.81□□□□□ -0.52
ITGB1-217ENST00000494395 HMOX1P09601 288 aa11.8□□□□□ -0.52
ITGB1-217ENST00000494395 AMOTQ4VCS5 1084 aa11.8□□□□□ -0.52
ITGB1-217ENST00000494395 IFNL2Q8IZJ0 200 aa11.8□□□□□ -0.52
ITGB1-217ENST00000494395 RALBP1Q15311 655 aa11.79□□□□□ -0.52
ITGB1-217ENST00000494395 TXNRD1Q16881 649 aa11.79□□□□□ -0.52
ITGB1-217ENST00000494395 PLEKHO1Q53GL0 409 aaPredicted RBP11.79□□□□□ -0.52
ITGB1-217ENST00000494395 EFCAB3Q8N7B9 438 aa11.79□□□□□ -0.52
ITGB1-217ENST00000494395 TAF1LQ8IZX4 1826 aa11.79□□□□□ -0.52
ITGB1-217ENST00000494395 ZNF316A6NFI3 1004 aaPredicted RBP11.78□□□□□ -0.52
ITGB1-217ENST00000494395 C19orf67A6NJJ6 358 aa11.78□□□□□ -0.52
ITGB1-217ENST00000494395 ZNF530Q6P9A1 599 aaPredicted RBP11.78□□□□□ -0.52
ITGB1-217ENST00000494395 CFAP53Q96M91 514 aa11.78□□□□□ -0.52
ITGB1-217ENST00000494395 ANO8Q9HCE9 1232 aaPredicted RBP11.78□□□□□ -0.52
ITGB1-217ENST00000494395 QSER1Q2KHR3 1735 aa11.77□□□□□ -0.52
ITGB1-217ENST00000494395 MRC1P22897 1456 aa11.77□□□□□ -0.52
ITGB1-217ENST00000494395 CASZ1Q86V15 1759 aa11.77□□□□□ -0.52
ITGB1-217ENST00000494395 TUBGCP6Q96RT7 1819 aa11.77□□□□□ -0.52
ITGB1-217ENST00000494395 SYTL4Q96C24 671 aaPredicted RBP11.77□□□□□ -0.53
ITGB1-217ENST00000494395 RSPH6AQ9H0K4 717 aa11.77□□□□□ -0.53
ITGB1-217ENST00000494395 LRRC4BQ9NT99 713 aa11.77□□□□□ -0.53
ITGB1-217ENST00000494395 C5P01031 1676 aa11.76□□□□□ -0.53
ITGB1-217ENST00000494395 ZNF831Q5JPB2 1677 aa11.76□□□□□ -0.53
ITGB1-217ENST00000494395 U2SURPO15042 1029 aaKnown RBP11.76□□□□□ -0.53
ITGB1-217ENST00000494395 PIGBQ92521 554 aa11.76□□□□□ -0.53
ITGB1-217ENST00000494395 DCAF5Q96JK2 942 aa11.76□□□□□ -0.53
ITGB1-217ENST00000494395 MYBBP1AQ9BQG0 1328 aaKnown RBP11.76□□□□□ -0.53
ITGB1-217ENST00000494395 LRP5O75197 1615 aa11.75□□□□□ -0.53
ITGB1-217ENST00000494395 SIPA1L3O60292 1781 aaPredicted RBP11.75□□□□□ -0.53
ITGB1-217ENST00000494395 HSP90AB1P08238 724 aaKnown RBP11.75□□□□□ -0.53
ITGB1-217ENST00000494395 MTHFSDQ2M296 383 aaKnown RBP11.75□□□□□ -0.53
ITGB1-217ENST00000494395 AKAP4Q5JQC9 854 aa11.75□□□□□ -0.53
ITGB1-217ENST00000494395 PRKRIP1Q9H875 184 aaPredicted RBP11.75□□□□□ -0.53
ITGB1-217ENST00000494395 PSDA5PKW4 1024 aaPredicted RBP11.74□□□□□ -0.53
ITGB1-217ENST00000494395 ERVV-2B6SEH9 535 aa11.74□□□□□ -0.53
ITGB1-217ENST00000494395 R3HDM1Q15032 1099 aaKnown RBP11.74□□□□□ -0.53
ITGB1-217ENST00000494395 C1orf141Q5JVX7 400 aa11.74□□□□□ -0.53
ITGB1-217ENST00000494395 SLC27A3Q5K4L6 730 aa11.74□□□□□ -0.53
ITGB1-217ENST00000494395 MPRIPQ6WCQ1 1025 aa11.74□□□□□ -0.53
ITGB1-217ENST00000494395 NUDCQ9Y266 331 aa11.74□□□□□ -0.53
ITGB1-217ENST00000494395 PALLDQ8WX93 1383 aa11.74□□□□□ -0.53
ITGB1-217ENST00000494395 CICQ96RK0 1608 aaPredicted RBP11.74□□□□□ -0.53
ITGB1-217ENST00000494395 DLG5Q8TDM6 1919 aa11.74□□□□□ -0.53
ITGB1-217ENST00000494395 FCHSD2O94868 740 aa11.73□□□□□ -0.53
ITGB1-217ENST00000494395 PRKAR2BP31323 418 aa11.73□□□□□ -0.53
ITGB1-217ENST00000494395 NBR1Q14596 966 aa11.73□□□□□ -0.53
ITGB1-217ENST00000494395 MS4A3Q96HJ5 214 aa11.73□□□□□ -0.53
ITGB1-217ENST00000494395 PHACTR3Q96KR7 559 aa11.73□□□□□ -0.53
ITGB1-217ENST00000494395 U2AF1L5P0DN76 240 aaPredicted RBP11.72□□□□□ -0.53
ITGB1-217ENST00000494395 U2AF1Q01081 240 aaKnown RBP eCLIP11.72□□□□□ -0.53
ITGB1-217ENST00000494395 NBPF14Q5TI25 921 aa11.72□□□□□ -0.53
ITGB1-217ENST00000494395 FBXO22Q8NEZ5 403 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms