RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 CCAR1Q8IX12 1150 aaKnown RBP13.84□□□□□ -0.19
COL25A1-204ENST00000494183 DUOX2Q9NRD8 1548 aa13.84□□□□□ -0.19
COL25A1-204ENST00000494183 NPHP3Q7Z494 1330 aa13.84□□□□□ -0.19
COL25A1-204ENST00000494183 CASTP20810 708 aaKnown RBP13.84□□□□□ -0.19
COL25A1-204ENST00000494183 CAVIN4Q5BKX8 364 aa13.84□□□□□ -0.19
COL25A1-204ENST00000494183 CABLES1Q8TDN4 633 aa13.84□□□□□ -0.19
COL25A1-204ENST00000494183 CDK5RAP3Q96JB5 506 aa13.84□□□□□ -0.19
COL25A1-204ENST00000494183 PTPRCP08575 1304 aa13.84□□□□□ -0.19
COL25A1-204ENST00000494183 PDILTQ8N807 584 aa13.84□□□□□ -0.19
COL25A1-204ENST00000494183 MSH6P52701 1360 aa13.84□□□□□ -0.19
COL25A1-204ENST00000494183 IMMTQ16891 758 aaKnown RBP13.84□□□□□ -0.19
COL25A1-204ENST00000494183 POLKQ9UBT6 870 aa13.84□□□□□ -0.19
COL25A1-204ENST00000494183 TEX14Q8IWB6 1497 aa13.84□□□□□ -0.19
COL25A1-204ENST00000494183 RIMS2Q9UQ26 1411 aa13.84□□□□□ -0.19
COL25A1-204ENST00000494183 TTC21AQ8NDW8 1320 aa13.83□□□□□ -0.19
COL25A1-204ENST00000494183 JARID2Q92833 1246 aaPredicted RBP13.83□□□□□ -0.19
COL25A1-204ENST00000494183 DDX11Q96FC9 970 aa13.83□□□□□ -0.19
COL25A1-204ENST00000494183 TESK2Q96S53 571 aa13.83□□□□□ -0.19
COL25A1-204ENST00000494183 PRPF40BQ6NWY9 871 aaKnown RBP13.83□□□□□ -0.2
COL25A1-204ENST00000494183 PIBF1Q8WXW3 757 aa13.83□□□□□ -0.2
COL25A1-204ENST00000494183 R3HCC1Q9Y3T6 440 aaKnown RBP13.83□□□□□ -0.2
COL25A1-204ENST00000494183 ANKIB1Q9P2G1 1089 aa13.83□□□□□ -0.2
COL25A1-204ENST00000494183 DCAF8L1A6NGE4 600 aa13.83□□□□□ -0.2
COL25A1-204ENST00000494183 MINDY4BA8MYZ0 360 aa13.83□□□□□ -0.2
COL25A1-204ENST00000494183 SNRPA1P09661 255 aaKnown RBP13.83□□□□□ -0.2
COL25A1-204ENST00000494183 NAP1L1P55209 391 aaKnown RBP13.83□□□□□ -0.2
COL25A1-204ENST00000494183 SLC39A6Q13433 755 aa13.83□□□□□ -0.2
COL25A1-204ENST00000494183 LDHAL6AQ6ZMR3 332 aa13.83□□□□□ -0.2
COL25A1-204ENST00000494183 ZSCAN31Q96LW9 406 aaPredicted RBP13.82□□□□□ -0.2
COL25A1-204ENST00000494183 U3KPZ7 1027 aaPredicted RBP13.82□□□□□ -0.2
COL25A1-204ENST00000494183 KCNA6P17658 529 aa13.82□□□□□ -0.2
COL25A1-204ENST00000494183 SOGA3Q5TF21 947 aa13.82□□□□□ -0.2
COL25A1-204ENST00000494183 CCDC70Q6NSX1 233 aa13.82□□□□□ -0.2
COL25A1-204ENST00000494183 NCKAP5LQ9HCH0 1330 aa13.82□□□□□ -0.2
COL25A1-204ENST00000494183 EPS15P42566 896 aa13.82□□□□□ -0.2
COL25A1-204ENST00000494183 TEX13AQ9BXU3 409 aaPredicted RBP13.82□□□□□ -0.2
COL25A1-204ENST00000494183 ANKRD13DQ6ZTN6 518 aa13.81□□□□□ -0.2
COL25A1-204ENST00000494183 PPP1R42Q7Z4L9 355 aa13.81□□□□□ -0.2
COL25A1-204ENST00000494183 FERMT3Q86UX7 667 aa13.81□□□□□ -0.2
COL25A1-204ENST00000494183 PRAG1Q86YV5 1406 aa13.81□□□□□ -0.2
COL25A1-204ENST00000494183 ANKRD18BA2A2Z9 1011 aa13.81□□□□□ -0.2
COL25A1-204ENST00000494183 HMGB2P26583 209 aaKnown RBP13.81□□□□□ -0.2
COL25A1-204ENST00000494183 EIF4A2Q14240 407 aaKnown RBP13.81□□□□□ -0.2
COL25A1-204ENST00000494183 PPIP5K1Q6PFW1 1433 aa13.81□□□□□ -0.2
COL25A1-204ENST00000494183 KRT18P05783 430 aaKnown RBP13.81□□□□□ -0.2
COL25A1-204ENST00000494183 C19orf44Q9H6X5 657 aa13.81□□□□□ -0.2
COL25A1-204ENST00000494183 UBAP1LF5GYI3 381 aa13.81□□□□□ -0.2
COL25A1-204ENST00000494183 LETM1O95202 739 aaPredicted RBP13.81□□□□□ -0.2
COL25A1-204ENST00000494183 CDKL5O76039 1030 aa13.8□□□□□ -0.2
COL25A1-204ENST00000494183 BRPF1P55201 1214 aaPredicted RBP13.8□□□□□ -0.2
COL25A1-204ENST00000494183 ZCRB1Q8TBF4 217 aaKnown RBP13.8□□□□□ -0.2
COL25A1-204ENST00000494183 LRRC59Q96AG4 307 aaKnown RBP13.8□□□□□ -0.2
COL25A1-204ENST00000494183 IL16Q14005 1332 aa13.8□□□□□ -0.2
COL25A1-204ENST00000494183 FAM43AQ8N2R8 423 aa13.8□□□□□ -0.2
COL25A1-204ENST00000494183 NAPBQ9H115 298 aa13.8□□□□□ -0.2
COL25A1-204ENST00000494183 SNRKQ9NRH2 765 aa13.8□□□□□ -0.2
COL25A1-204ENST00000494183 ABCC10Q5T3U5 1492 aa13.8□□□□□ -0.2
COL25A1-204ENST00000494183 SMC2O95347 1197 aa13.79□□□□□ -0.2
COL25A1-204ENST00000494183 MAP3K12Q12852 859 aa13.79□□□□□ -0.2
COL25A1-204ENST00000494183 ECHDC1Q9NTX5 307 aa13.79□□□□□ -0.2
COL25A1-204ENST00000494183 CWC25Q9NXE8 425 aaPredicted RBP13.79□□□□□ -0.2
COL25A1-204ENST00000494183 CARD14Q9BXL6 1004 aa13.79□□□□□ -0.2
COL25A1-204ENST00000494183 TSPY26PQ9H489 355 aa13.79□□□□□ -0.2
COL25A1-204ENST00000494183 ZMYM3Q14202 1370 aa13.79□□□□□ -0.2
COL25A1-204ENST00000494183 TOM1O60784 492 aa13.79□□□□□ -0.2
COL25A1-204ENST00000494183 USP5P45974 858 aa13.78□□□□□ -0.2
COL25A1-204ENST00000494183 CT47A1Q5JQC4 288 aaPredicted RBP13.78□□□□□ -0.2
COL25A1-204ENST00000494183 COPS6Q7L5N1 327 aa13.78□□□□□ -0.2
COL25A1-204ENST00000494183 CCDC83Q8IWF9 413 aa13.78□□□□□ -0.2
COL25A1-204ENST00000494183 C8orf58Q8NAV2 365 aa13.78□□□□□ -0.2
COL25A1-204ENST00000494183 TNMDQ9H2S6 317 aa13.78□□□□□ -0.2
COL25A1-204ENST00000494183 ZHX3Q9H4I2 956 aa13.78□□□□□ -0.2
COL25A1-204ENST00000494183 TMOD2Q9NZR1 351 aa13.78□□□□□ -0.2
COL25A1-204ENST00000494183 CHPF2Q9P2E5 772 aa13.78□□□□□ -0.2
COL25A1-204ENST00000494183 TSHZ3Q63HK5 1081 aa13.78□□□□□ -0.2
COL25A1-204ENST00000494183 SPATA32Q96LK8 384 aa13.78□□□□□ -0.2
COL25A1-204ENST00000494183 MEIS3Q99687 375 aa13.78□□□□□ -0.2
COL25A1-204ENST00000494183 BCL11BQ9C0K0 894 aaPredicted RBP13.78□□□□□ -0.2
COL25A1-204ENST00000494183 ZNF219Q9P2Y4 722 aaPredicted RBP13.78□□□□□ -0.2
COL25A1-204ENST00000494183 CCDC82Q8N4S0 544 aa13.78□□□□□ -0.2
COL25A1-204ENST00000494183 GCP02774 474 aa13.78□□□□□ -0.2
COL25A1-204ENST00000494183 DZIP1Q86YF9 867 aaKnown RBP13.78□□□□□ -0.2
COL25A1-204ENST00000494183 RALGAPBQ86X10 1494 aa13.77□□□□□ -0.2
COL25A1-204ENST00000494183 PIK3R4Q99570 1358 aa13.77□□□□□ -0.2
COL25A1-204ENST00000494183 POLR3DP05423 398 aaPredicted RBP13.77□□□□□ -0.2
COL25A1-204ENST00000494183 SLC5A1P13866 664 aa13.77□□□□□ -0.2
COL25A1-204ENST00000494183 XAGE3Q8WTP9 111 aa13.77□□□□□ -0.2
COL25A1-204ENST00000494183 MKNK2Q9HBH9 465 aa13.77□□□□□ -0.2
COL25A1-204ENST00000494183 C6orf229H3BNL8 230 aa13.77□□□□□ -0.21
COL25A1-204ENST00000494183 IGHDP01880 384 aa13.77□□□□□ -0.21
COL25A1-204ENST00000494183 CFAP45Q9UL16 551 aa13.77□□□□□ -0.21
COL25A1-204ENST00000494183 CIZ1Q9ULV3 898 aaPredicted RBP13.77□□□□□ -0.21
COL25A1-204ENST00000494183 MCM4P33991 863 aa13.77□□□□□ -0.21
COL25A1-204ENST00000494183 ACSBG1Q96GR2 724 aa13.77□□□□□ -0.21
COL25A1-204ENST00000494183 NOL7Q9UMY1 257 aaKnown RBP13.77□□□□□ -0.21
COL25A1-204ENST00000494183 CCDC192P0DO97 292 aa13.76□□□□□ -0.21
COL25A1-204ENST00000494183 PIP4K2AP48426 406 aaPredicted RBP13.76□□□□□ -0.21
COL25A1-204ENST00000494183 MTHFSDQ2M296 383 aaKnown RBP13.76□□□□□ -0.21
COL25A1-204ENST00000494183 FILIP1LQ4L180 1135 aa13.76□□□□□ -0.21
COL25A1-204ENST00000494183 TTLL5Q6EMB2 1281 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms