RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 UBR2Q8IWV8 1755 aa21.61■■□□□ 1.05
SATB1-217ENST00000493952 COL24A1Q17RW2 1714 aa21.61■■□□□ 1.05
SATB1-217ENST00000493952 ZNF316A6NFI3 1004 aaPredicted RBP21.61■■□□□ 1.05
SATB1-217ENST00000493952 CICQ96RK0 1608 aaPredicted RBP21.61■■□□□ 1.05
SATB1-217ENST00000493952 MYBBP1AQ9BQG0 1328 aaKnown RBP21.6■■□□□ 1.05
SATB1-217ENST00000493952 PHACTR3Q96KR7 559 aa21.6■■□□□ 1.05
SATB1-217ENST00000493952 ATG3Q9NT62 314 aa21.6■■□□□ 1.05
SATB1-217ENST00000493952 LGR6Q9HBX8 967 aa21.59■■□□□ 1.05
SATB1-217ENST00000493952 MAP3K5Q99683 1374 aa21.59■■□□□ 1.05
SATB1-217ENST00000493952 NFATC2IPQ8NCF5 419 aa21.58■■□□□ 1.05
SATB1-217ENST00000493952 MYH14Q7Z406 1995 aaKnown RBP21.57■■□□□ 1.04
SATB1-217ENST00000493952 SRCAPQ6ZRS2 3230 aa21.57■■□□□ 1.04
SATB1-217ENST00000493952 LOC102724428A0A0B4J2F2 783 aa21.57■■□□□ 1.04
SATB1-217ENST00000493952 RNMTO43148 476 aaKnown RBP21.57■■□□□ 1.04
SATB1-217ENST00000493952 FCHSD2O94868 740 aa21.57■■□□□ 1.04
SATB1-217ENST00000493952 SIK1P57059 783 aa21.57■■□□□ 1.04
SATB1-217ENST00000493952 GAS2L2Q8NHY3 880 aa21.57■■□□□ 1.04
SATB1-217ENST00000493952 PRKRIP1Q9H875 184 aaPredicted RBP21.57■■□□□ 1.04
SATB1-217ENST00000493952 PNPLA7Q6ZV29 1317 aa21.55■■□□□ 1.04
SATB1-217ENST00000493952 SLC52A2Q9HAB3 445 aa21.55■■□□□ 1.04
SATB1-217ENST00000493952 TFCP2L1Q9NZI6 479 aa21.55■■□□□ 1.04
SATB1-217ENST00000493952 GNAT3A8MTJ3 354 aa21.54■■□□□ 1.04
SATB1-217ENST00000493952 ZBTB7AO95365 584 aa21.54■■□□□ 1.04
SATB1-217ENST00000493952 ATP6V1AP38606 617 aa21.53■■□□□ 1.04
SATB1-217ENST00000493952 ITPK1Q13572 414 aa21.53■■□□□ 1.04
SATB1-217ENST00000493952 LINC00116Q8NCU8 138 aa21.53■■□□□ 1.04
SATB1-217ENST00000493952 SLC4A9Q96Q91 983 aa21.53■■□□□ 1.04
SATB1-217ENST00000493952 SPON1Q9HCB6 807 aa21.53■■□□□ 1.04
SATB1-217ENST00000493952 KCPQ6ZWJ8 1503 aa21.53■■□□□ 1.04
SATB1-217ENST00000493952 RBM42Q9BTD8 480 aaKnown RBP21.52■■□□□ 1.04
SATB1-217ENST00000493952 C4AP0C0L4 1744 aa21.52■■□□□ 1.03
SATB1-217ENST00000493952 IL17REQ8NFR9 667 aa21.51■■□□□ 1.03
SATB1-217ENST00000493952 HMGB2P26583 209 aaKnown RBP21.5■■□□□ 1.03
SATB1-217ENST00000493952 CEMIPQ8WUJ3 1361 aa21.49■■□□□ 1.03
SATB1-217ENST00000493952 PTCD1O75127 700 aaKnown RBP21.49■■□□□ 1.03
SATB1-217ENST00000493952 PLEKHF1Q96S99 279 aa21.49■■□□□ 1.03
SATB1-217ENST00000493952 MTFR1LQ9H019 292 aa21.49■■□□□ 1.03
SATB1-217ENST00000493952 ATF5Q9Y2D1 282 aaPredicted RBP21.49■■□□□ 1.03
SATB1-217ENST00000493952 AK7Q96M32 723 aa21.48■■□□□ 1.03
SATB1-217ENST00000493952 KDM3BQ7LBC6 1761 aa21.47■■□□□ 1.03
SATB1-217ENST00000493952 PTGER2P43116 358 aa21.47■■□□□ 1.03
SATB1-217ENST00000493952 SLC39A6Q13433 755 aa21.47■■□□□ 1.03
SATB1-217ENST00000493952 AMIGO3Q86WK7 504 aa21.47■■□□□ 1.03
SATB1-217ENST00000493952 COL23A1Q86Y22 540 aaPredicted RBP21.47■■□□□ 1.03
SATB1-217ENST00000493952 TEFQ10587 303 aa21.46■■□□□ 1.03
SATB1-217ENST00000493952 NEFMP07197 916 aa21.45■■□□□ 1.02
SATB1-217ENST00000493952 SLC16A10Q8TF71 515 aa21.45■■□□□ 1.02
SATB1-217ENST00000493952 SMIM5Q71RC9 77 aa21.44■■□□□ 1.02
SATB1-217ENST00000493952 SGIP1Q9BQI5 828 aa21.44■■□□□ 1.02
SATB1-217ENST00000493952 PNNQ9H307 717 aaKnown RBP21.44■■□□□ 1.02
SATB1-217ENST00000493952 GNPATO15228 680 aa21.43■■□□□ 1.02
SATB1-217ENST00000493952 MSH5O43196 834 aa21.43■■□□□ 1.02
SATB1-217ENST00000493952 MCM10Q7L590 875 aa21.43■■□□□ 1.02
SATB1-217ENST00000493952 RTF1Q92541 710 aaKnown RBP21.43■■□□□ 1.02
SATB1-217ENST00000493952 PPP1R1BQ9UD71 204 aaPredicted RBP21.43■■□□□ 1.02
SATB1-217ENST00000493952 MAPK8IP3Q9UPT6 1336 aa21.43■■□□□ 1.02
SATB1-217ENST00000493952 PHF14O94880 888 aa21.42■■□□□ 1.02
SATB1-217ENST00000493952 DCTN1Q14203 1278 aa21.42■■□□□ 1.02
SATB1-217ENST00000493952 FLAD1Q8NFF5 587 aa21.42■■□□□ 1.02
SATB1-217ENST00000493952 CNTNAP4Q9C0A0 1308 aa21.42■■□□□ 1.02
SATB1-217ENST00000493952 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.41■■□□□ 1.02
SATB1-217ENST00000493952 HTATSF1O43719 755 aaKnown RBP21.41■■□□□ 1.02
SATB1-217ENST00000493952 NFE2L2Q16236 605 aa21.41■■□□□ 1.02
SATB1-217ENST00000493952 SSFA2P28290 1259 aa21.4■■□□□ 1.02
SATB1-217ENST00000493952 WDR43Q15061 677 aaKnown RBP eCLIP21.4■■□□□ 1.02
SATB1-217ENST00000493952 RC3H1Q5TC82 1133 aaKnown RBP21.4■■□□□ 1.02
SATB1-217ENST00000493952 TTC5Q8N0Z6 440 aa21.4■■□□□ 1.02
SATB1-217ENST00000493952 LAMB4A4D0S4 1761 aa21.4■■□□□ 1.02
SATB1-217ENST00000493952 ZNF790Q6PG37 636 aa21.39■■□□□ 1.01
SATB1-217ENST00000493952 DNAJC10Q8IXB1 793 aa21.39■■□□□ 1.01
SATB1-217ENST00000493952 BTBD11A6QL63 1104 aa21.37■■□□□ 1.01
SATB1-217ENST00000493952 CRKLP46109 303 aaKnown RBP21.37■■□□□ 1.01
SATB1-217ENST00000493952 MSL1Q68DK7 614 aa21.37■■□□□ 1.01
SATB1-217ENST00000493952 CCDC146Q8IYE0 955 aa21.37■■□□□ 1.01
SATB1-217ENST00000493952 VSIG10Q8N0Z9 540 aa21.37■■□□□ 1.01
SATB1-217ENST00000493952 ZNF496Q96IT1 587 aaPredicted RBP21.37■■□□□ 1.01
SATB1-217ENST00000493952 ADAMTS8Q9UP79 889 aa21.37■■□□□ 1.01
SATB1-217ENST00000493952 RTCBQ9Y3I0 505 aaKnown RBP21.37■■□□□ 1.01
SATB1-217ENST00000493952 HEG1Q9ULI3 1381 aa21.36■■□□□ 1.01
SATB1-217ENST00000493952 CCDC184Q52MB2 194 aa21.36■■□□□ 1.01
SATB1-217ENST00000493952 KCNQ3O43525 872 aa21.35■■□□□ 1.01
SATB1-217ENST00000493952 RPS6KA4O75676 772 aa21.35■■□□□ 1.01
SATB1-217ENST00000493952 ARXQ96QS3 562 aa21.35■■□□□ 1.01
SATB1-217ENST00000493952 ANP32CO43423 234 aa21.34■■□□□ 1.01
SATB1-217ENST00000493952 CYP19A1P11511 503 aaPredicted RBP21.34■■□□□ 1.01
SATB1-217ENST00000493952 POLD1P28340 1107 aa21.34■■□□□ 1.01
SATB1-217ENST00000493952 INTS5Q6P9B9 1019 aaKnown RBP21.34■■□□□ 1.01
SATB1-217ENST00000493952 TMPOP42166 694 aaKnown RBP21.33■■□□□ 1.01
SATB1-217ENST00000493952 TRAPPC3LQ5T215 181 aa21.33■■□□□ 1.01
SATB1-217ENST00000493952 FMNL2Q96PY5 1086 aa21.33■■□□□ 1.01
SATB1-217ENST00000493952 THUMPD2Q9BTF0 503 aaKnown RBP21.33■■□□□ 1.01
SATB1-217ENST00000493952 ADRA2BP18089 450 aa21.32■■□□□ 1
SATB1-217ENST00000493952 RIPK4P57078 832 aa21.32■■□□□ 1
SATB1-217ENST00000493952 TAF7Q15545 349 aaPredicted RBP21.32■■□□□ 1
SATB1-217ENST00000493952 ARHGEF1Q92888 912 aaKnown RBP21.32■■□□□ 1
SATB1-217ENST00000493952 RUNDC1Q96C34 613 aa21.32■■□□□ 1
SATB1-217ENST00000493952 CCDC87Q9NVE4 849 aa21.32■■□□□ 1
SATB1-217ENST00000493952 FHDC1Q9C0D6 1143 aaPredicted RBP21.31■■□□□ 1
SATB1-217ENST00000493952 RRP7AQ9Y3A4 280 aaKnown RBP21.31■■□□□ 1
SATB1-217ENST00000493952 KIF13BQ9NQT8 1826 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms