RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 WDR63Q8IWG1 891 aa16.26■□□□□ 0.19
SNX17-208ENST00000493711 THSD7AQ9UPZ6 1657 aa16.26■□□□□ 0.19
SNX17-208ENST00000493711 ZBED9Q6R2W3 1325 aa16.25■□□□□ 0.19
SNX17-208ENST00000493711 RNMTO43148 476 aaKnown RBP16.25■□□□□ 0.19
SNX17-208ENST00000493711 KRT27Q7Z3Y8 459 aa16.25■□□□□ 0.19
SNX17-208ENST00000493711 WWC1Q8IX03 1113 aa16.25■□□□□ 0.19
SNX17-208ENST00000493711 PIP4P2Q8N4L2 257 aa16.25■□□□□ 0.19
SNX17-208ENST00000493711 MARCH10Q8NA82 808 aaPredicted RBP16.25■□□□□ 0.19
SNX17-208ENST00000493711 TRIM35Q9UPQ4 493 aa16.25■□□□□ 0.19
SNX17-208ENST00000493711 CLEC11AQ9Y240 323 aa16.25■□□□□ 0.19
SNX17-208ENST00000493711 PKD1L3Q7Z443 1732 aa16.25■□□□□ 0.19
SNX17-208ENST00000493711 IL16Q14005 1332 aa16.24■□□□□ 0.19
SNX17-208ENST00000493711 TEFQ10587 303 aa16.24■□□□□ 0.19
SNX17-208ENST00000493711 BCL9O00512 1426 aa16.24■□□□□ 0.19
SNX17-208ENST00000493711 CEMIPQ8WUJ3 1361 aa16.24■□□□□ 0.19
SNX17-208ENST00000493711 MPRIPQ6WCQ1 1025 aa16.23■□□□□ 0.19
SNX17-208ENST00000493711 BABAM1Q9NWV8 329 aa16.23■□□□□ 0.19
SNX17-208ENST00000493711 FAM196AQ6ZSG2 479 aa16.22■□□□□ 0.19
SNX17-208ENST00000493711 IL17REQ8NFR9 667 aa16.22■□□□□ 0.19
SNX17-208ENST00000493711 SALL2Q9Y467 1007 aaPredicted RBP16.22■□□□□ 0.19
SNX17-208ENST00000493711 ZNF521Q96K83 1311 aa16.21■□□□□ 0.19
SNX17-208ENST00000493711 LRRC37A3O60309 1634 aa16.21■□□□□ 0.19
SNX17-208ENST00000493711 CABP4P57796 275 aa16.21■□□□□ 0.19
SNX17-208ENST00000493711 GNAI1P63096 354 aa16.21■□□□□ 0.19
SNX17-208ENST00000493711 GOLGA2Q08379 1002 aa16.21■□□□□ 0.19
SNX17-208ENST00000493711 MCM10Q7L590 875 aa16.21■□□□□ 0.19
SNX17-208ENST00000493711 WNK3Q9BYP7 1800 aa16.21■□□□□ 0.19
SNX17-208ENST00000493711 TAF7Q15545 349 aaPredicted RBP16.2■□□□□ 0.18
SNX17-208ENST00000493711 SLC52A2Q9HAB3 445 aa16.2■□□□□ 0.18
SNX17-208ENST00000493711 LGR6Q9HBX8 967 aa16.2■□□□□ 0.18
SNX17-208ENST00000493711 IFT57Q9NWB7 429 aa16.2■□□□□ 0.18
SNX17-208ENST00000493711 KDM6AO15550 1401 aaPredicted RBP16.19■□□□□ 0.18
SNX17-208ENST00000493711 E9PSI1 815 aa16.19■□□□□ 0.18
SNX17-208ENST00000493711 CFAP44Q96MT7 982 aa16.19■□□□□ 0.18
SNX17-208ENST00000493711 YTHDC1Q96MU7 727 aaKnown RBP16.19■□□□□ 0.18
SNX17-208ENST00000493711 MYH16Q9H6N6 1097 aa16.19■□□□□ 0.18
SNX17-208ENST00000493711 TMOD3Q9NYL9 352 aa16.19■□□□□ 0.18
SNX17-208ENST00000493711 DCTN1Q14203 1278 aa16.18■□□□□ 0.18
SNX17-208ENST00000493711 SPDYE1Q8NFV5 336 aaPredicted RBP16.17■□□□□ 0.18
SNX17-208ENST00000493711 SPDYE4A6NLX3 237 aa16.16■□□□□ 0.18
SNX17-208ENST00000493711 CHL1O00533 1208 aa16.16■□□□□ 0.18
SNX17-208ENST00000493711 NFATC2IPQ8NCF5 419 aa16.16■□□□□ 0.18
SNX17-208ENST00000493711 THUMPD2Q9BTF0 503 aaKnown RBP16.16■□□□□ 0.18
SNX17-208ENST00000493711 MRC1P22897 1456 aa16.16■□□□□ 0.18
SNX17-208ENST00000493711 SENP3-EIF4A1A0A087X0R7 540 aa16.15■□□□□ 0.18
SNX17-208ENST00000493711 BTBD11A6QL63 1104 aa16.15■□□□□ 0.18
SNX17-208ENST00000493711 ZNF853P0CG23 659 aa16.15■□□□□ 0.18
SNX17-208ENST00000493711 PRIM1P49642 420 aaKnown RBP16.15■□□□□ 0.18
SNX17-208ENST00000493711 FXR2P51116 673 aaKnown RBP eCLIP16.15■□□□□ 0.18
SNX17-208ENST00000493711 SMARCC1Q92922 1105 aaPredicted RBP16.14■□□□□ 0.17
SNX17-208ENST00000493711 SYTL4Q96C24 671 aaPredicted RBP16.14■□□□□ 0.17
SNX17-208ENST00000493711 BCL11BQ9C0K0 894 aaPredicted RBP16.14■□□□□ 0.17
SNX17-208ENST00000493711 TSPYL4Q9UJ04 414 aa16.14■□□□□ 0.17
SNX17-208ENST00000493711 ADAMTS7Q9UKP4 1686 aa16.14■□□□□ 0.17
SNX17-208ENST00000493711 SLFN5Q08AF3 891 aa16.13■□□□□ 0.17
SNX17-208ENST00000493711 TTC5Q8N0Z6 440 aa16.13■□□□□ 0.17
SNX17-208ENST00000493711 PIGBQ92521 554 aa16.13■□□□□ 0.17
SNX17-208ENST00000493711 CHMP4AQ9BY43 222 aa16.13■□□□□ 0.17
SNX17-208ENST00000493711 LAS1LQ9Y4W2 734 aaKnown RBP16.13■□□□□ 0.17
SNX17-208ENST00000493711 HMGB2P26583 209 aaKnown RBP16.12■□□□□ 0.17
SNX17-208ENST00000493711 DEFB132Q7Z7B7 95 aa16.12■□□□□ 0.17
SNX17-208ENST00000493711 ACSBG1Q96GR2 724 aa16.12■□□□□ 0.17
SNX17-208ENST00000493711 SHANK3Q9BYB0 1731 aa16.11■□□□□ 0.17
SNX17-208ENST00000493711 FAM182BQ5T319 152 aa16.11■□□□□ 0.17
SNX17-208ENST00000493711 ZNF790Q6PG37 636 aa16.11■□□□□ 0.17
SNX17-208ENST00000493711 TRMT2AQ8IZ69 625 aaKnown RBP16.11■□□□□ 0.17
SNX17-208ENST00000493711 SOS1Q07889 1333 aaPredicted RBP16.11■□□□□ 0.17
SNX17-208ENST00000493711 SF3B2Q13435 895 aaKnown RBP16.1■□□□□ 0.17
SNX17-208ENST00000493711 MBIPQ9NS73 344 aa16.1■□□□□ 0.17
SNX17-208ENST00000493711 FANCIQ9NVI1 1328 aa16.09■□□□□ 0.17
SNX17-208ENST00000493711 KCNQ2O43526 872 aa16.08■□□□□ 0.16
SNX17-208ENST00000493711 CT47B1P0C2W7 299 aaPredicted RBP16.08■□□□□ 0.16
SNX17-208ENST00000493711 CDCA7LQ96GN5 454 aa16.08■□□□□ 0.16
SNX17-208ENST00000493711 FMNL2Q96PY5 1086 aa16.08■□□□□ 0.16
SNX17-208ENST00000493711 HOXB7P09629 217 aa16.07■□□□□ 0.16
SNX17-208ENST00000493711 DUSP27Q5VZP5 1158 aa16.07■□□□□ 0.16
SNX17-208ENST00000493711 VSIG10Q8N0Z9 540 aa16.07■□□□□ 0.16
SNX17-208ENST00000493711 TEX13AQ9BXU3 409 aaPredicted RBP16.07■□□□□ 0.16
SNX17-208ENST00000493711 ATG3Q9NT62 314 aa16.07■□□□□ 0.16
SNX17-208ENST00000493711 MIS18AQ9NYP9 233 aa16.07■□□□□ 0.16
SNX17-208ENST00000493711 TRIM37O94972 964 aa16.06■□□□□ 0.16
SNX17-208ENST00000493711 EIF4A1P60842 406 aaKnown RBP16.06■□□□□ 0.16
SNX17-208ENST00000493711 TSR2Q969E8 191 aaKnown RBP16.06■□□□□ 0.16
SNX17-208ENST00000493711 ZNF428Q96B54 188 aa16.06■□□□□ 0.16
SNX17-208ENST00000493711 ASAP1Q9ULH1 1129 aa16.06■□□□□ 0.16
SNX17-208ENST00000493711 SCN11AQ9UI33 1791 aa16.05■□□□□ 0.16
SNX17-208ENST00000493711 SLC39A6Q13433 755 aa16.05■□□□□ 0.16
SNX17-208ENST00000493711 LRP5O75197 1615 aa16.05■□□□□ 0.16
SNX17-208ENST00000493711 DLG5Q8TDM6 1919 aa16.04■□□□□ 0.16
SNX17-208ENST00000493711 PALLDQ8WX93 1383 aa16.04■□□□□ 0.16
SNX17-208ENST00000493711 SNRPA1P09661 255 aaKnown RBP16.04■□□□□ 0.16
SNX17-208ENST00000493711 HEG1Q9ULI3 1381 aa16.03■□□□□ 0.16
SNX17-208ENST00000493711 PSDA5PKW4 1024 aaPredicted RBP16.03■□□□□ 0.16
SNX17-208ENST00000493711 PLSCR1O15162 318 aa16.03■□□□□ 0.16
SNX17-208ENST00000493711 EXOSC9Q06265 439 aaKnown RBP16.03■□□□□ 0.16
SNX17-208ENST00000493711 ZNF496Q96IT1 587 aaPredicted RBP16.03■□□□□ 0.16
SNX17-208ENST00000493711 TOGARAM1Q9Y4F4 1720 aa16.02■□□□□ 0.16
SNX17-208ENST00000493711 NHSQ6T4R5 1651 aa16.02■□□□□ 0.16
SNX17-208ENST00000493711 KCNQ3O43525 872 aa16.02■□□□□ 0.16
SNX17-208ENST00000493711 PTCD1O75127 700 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms