RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 LNPKQ9C0E8 428 aa13.51□□□□□ -0.25
PHACTR4-204ENST00000493669 DAXXQ9UER7 740 aaPredicted RBP13.51□□□□□ -0.25
PHACTR4-204ENST00000493669 HSPA2P54652 639 aa13.5□□□□□ -0.25
PHACTR4-204ENST00000493669 TEFQ10587 303 aa13.5□□□□□ -0.25
PHACTR4-204ENST00000493669 G2E3Q7L622 706 aa13.5□□□□□ -0.25
PHACTR4-204ENST00000493669 AXIN2Q9Y2T1 843 aa13.5□□□□□ -0.25
PHACTR4-204ENST00000493669 CPDO75976 1380 aa13.5□□□□□ -0.25
PHACTR4-204ENST00000493669 SPATA31A3Q5VYP0 1347 aa13.5□□□□□ -0.25
PHACTR4-204ENST00000493669 EIF4A1P60842 406 aaKnown RBP13.5□□□□□ -0.25
PHACTR4-204ENST00000493669 CEP85Q6P2H3 762 aa13.5□□□□□ -0.25
PHACTR4-204ENST00000493669 RGPD5Q99666 1765 aa13.5□□□□□ -0.25
PHACTR4-204ENST00000493669 RNMTO43148 476 aaKnown RBP13.5□□□□□ -0.25
PHACTR4-204ENST00000493669 SEC24BO95487 1268 aa13.5□□□□□ -0.25
PHACTR4-204ENST00000493669 TBC1D32Q96NH3 1257 aa13.5□□□□□ -0.25
PHACTR4-204ENST00000493669 HMMRO75330 724 aa13.49□□□□□ -0.25
PHACTR4-204ENST00000493669 HDGFL1Q5TGJ6 251 aa13.49□□□□□ -0.25
PHACTR4-204ENST00000493669 LGR6Q9HBX8 967 aa13.49□□□□□ -0.25
PHACTR4-204ENST00000493669 MEIS3Q99687 375 aa13.48□□□□□ -0.25
PHACTR4-204ENST00000493669 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.48□□□□□ -0.252e-6■■■□□ 17.3
PHACTR4-204ENST00000493669 SIPA1L3O60292 1781 aaPredicted RBP13.48□□□□□ -0.25
PHACTR4-204ENST00000493669 GNAI3P08754 354 aa13.48□□□□□ -0.25
PHACTR4-204ENST00000493669 FKBP5Q13451 457 aaPredicted RBP13.48□□□□□ -0.25
PHACTR4-204ENST00000493669 ZC3H6P61129 1189 aaKnown RBP13.48□□□□□ -0.25
PHACTR4-204ENST00000493669 BTBD11A6QL63 1104 aa13.47□□□□□ -0.25
PHACTR4-204ENST00000493669 EIF5BO60841 1220 aaKnown RBP13.47□□□□□ -0.25
PHACTR4-204ENST00000493669 GNAI2P04899 355 aa13.46□□□□□ -0.25
PHACTR4-204ENST00000493669 BECN1Q14457 450 aa13.46□□□□□ -0.25
PHACTR4-204ENST00000493669 SLC4A10Q6U841 1118 aa13.46□□□□□ -0.25
PHACTR4-204ENST00000493669 RAPGEF4Q8WZA2 1011 aa13.46□□□□□ -0.25
PHACTR4-204ENST00000493669 HEG1Q9ULI3 1381 aa13.46□□□□□ -0.25
PHACTR4-204ENST00000493669 F6X3S4 739 aa13.46□□□□□ -0.25
PHACTR4-204ENST00000493669 KDM4FA0A1W2PPD8 638 aa13.45□□□□□ -0.26
PHACTR4-204ENST00000493669 MPRIPQ6WCQ1 1025 aa13.45□□□□□ -0.26
PHACTR4-204ENST00000493669 TATP17735 454 aaPredicted RBP13.45□□□□□ -0.26
PHACTR4-204ENST00000493669 BRINP3Q76B58 766 aa13.45□□□□□ -0.26
PHACTR4-204ENST00000493669 SPG7Q9UQ90 795 aa13.45□□□□□ -0.26
PHACTR4-204ENST00000493669 DDX17Q92841 729 aaKnown RBP13.44□□□□□ -0.26
PHACTR4-204ENST00000493669 NLRP2Q9NX02 1062 aa13.44□□□□□ -0.26
PHACTR4-204ENST00000493669 PKD1L3Q7Z443 1732 aa13.44□□□□□ -0.26
PHACTR4-204ENST00000493669 SCN11AQ9UI33 1791 aa13.44□□□□□ -0.26
PHACTR4-204ENST00000493669 PLEKHG5O94827 1062 aa13.43□□□□□ -0.26
PHACTR4-204ENST00000493669 SOS2Q07890 1332 aaPredicted RBP13.43□□□□□ -0.26
PHACTR4-204ENST00000493669 NECTIN2Q92692 538 aa13.43□□□□□ -0.26
PHACTR4-204ENST00000493669 MRC1P22897 1456 aa13.42□□□□□ -0.26
PHACTR4-204ENST00000493669 PLEKHM2Q8IWE5 1019 aa13.42□□□□□ -0.26
PHACTR4-204ENST00000493669 C22orf23Q9BZE7 217 aa13.42□□□□□ -0.26
PHACTR4-204ENST00000493669 DBF4Q9UBU7 674 aaPredicted RBP13.42□□□□□ -0.26
PHACTR4-204ENST00000493669 MEGF6O75095 1541 aa13.42□□□□□ -0.26
PHACTR4-204ENST00000493669 USP35Q9P2H5 1018 aa13.41□□□□□ -0.26
PHACTR4-204ENST00000493669 KCNQ3O43525 872 aa13.41□□□□□ -0.26
PHACTR4-204ENST00000493669 GIGYF1O75420 1035 aaPredicted RBP13.41□□□□□ -0.26
PHACTR4-204ENST00000493669 CSB-PGBD3P0DP91 1061 aa13.41□□□□□ -0.26
PHACTR4-204ENST00000493669 PHKG2P15735 406 aa13.41□□□□□ -0.26
PHACTR4-204ENST00000493669 SLAIN2Q9P270 581 aa13.41□□□□□ -0.26
PHACTR4-204ENST00000493669 EIF2S2P20042 333 aaKnown RBP13.41□□□□□ -0.26
PHACTR4-204ENST00000493669 MFAP1P55081 439 aaKnown RBP13.41□□□□□ -0.26
PHACTR4-204ENST00000493669 ATP8B2P98198 1209 aa13.41□□□□□ -0.26
PHACTR4-204ENST00000493669 IFNL2Q8IZJ0 200 aa13.41□□□□□ -0.26
PHACTR4-204ENST00000493669 SRCIN1Q9C0H9 1055 aa13.41□□□□□ -0.26
PHACTR4-204ENST00000493669 CHPF2Q9P2E5 772 aa13.41□□□□□ -0.26
PHACTR4-204ENST00000493669 KDM6AO15550 1401 aaPredicted RBP13.4□□□□□ -0.26
PHACTR4-204ENST00000493669 PARP4Q9UKK3 1724 aaKnown RBP13.4□□□□□ -0.26
PHACTR4-204ENST00000493669 HSP90AB1P08238 724 aaKnown RBP13.4□□□□□ -0.26
PHACTR4-204ENST00000493669 PHAXQ9H814 394 aaKnown RBP13.4□□□□□ -0.26
PHACTR4-204ENST00000493669 CDC45O75419 566 aa13.4□□□□□ -0.26
PHACTR4-204ENST00000493669 RBM25P49756 843 aaKnown RBP13.4□□□□□ -0.26
PHACTR4-204ENST00000493669 TTC22Q5TAA0 569 aa13.4□□□□□ -0.26
PHACTR4-204ENST00000493669 CABLES1Q8TDN4 633 aa13.4□□□□□ -0.26
PHACTR4-204ENST00000493669 SLC52A2Q9HAB3 445 aa13.4□□□□□ -0.26
PHACTR4-204ENST00000493669 ZNF335Q9H4Z2 1342 aaPredicted RBP13.39□□□□□ -0.27
PHACTR4-204ENST00000493669 UBTFL1P0CB47 393 aaPredicted RBP13.39□□□□□ -0.27
PHACTR4-204ENST00000493669 DNAAF4Q8WXU2 420 aa13.39□□□□□ -0.27
PHACTR4-204ENST00000493669 USP44Q9H0E7 712 aa13.39□□□□□ -0.27
PHACTR4-204ENST00000493669 IBTKQ9P2D0 1353 aaPredicted RBP13.39□□□□□ -0.27
PHACTR4-204ENST00000493669 DCAF5Q96JK2 942 aa13.38□□□□□ -0.27
PHACTR4-204ENST00000493669 NHSL1Q5SYE7 1610 aa13.38□□□□□ -0.27
PHACTR4-204ENST00000493669 ABCA3Q99758 1704 aa13.38□□□□□ -0.27
PHACTR4-204ENST00000493669 RTL5Q5HYW3 569 aaPredicted RBP13.38□□□□□ -0.27
PHACTR4-204ENST00000493669 OSBPL3Q9H4L5 887 aa13.38□□□□□ -0.27
PHACTR4-204ENST00000493669 HYPKQ9NX55 129 aa13.38□□□□□ -0.27
PHACTR4-204ENST00000493669 SLC4A3P48751 1232 aa13.38□□□□□ -0.27
PHACTR4-204ENST00000493669 BEND3Q5T5X7 828 aa13.38□□□□□ -0.27
PHACTR4-204ENST00000493669 GSPT1P15170 499 aaKnown RBP13.37□□□□□ -0.27
PHACTR4-204ENST00000493669 CHRNA2Q15822 529 aa13.37□□□□□ -0.27
PHACTR4-204ENST00000493669 TBC1D9Q6ZT07 1266 aa13.37□□□□□ -0.27
PHACTR4-204ENST00000493669 HDAC5Q9UQL6 1122 aa13.37□□□□□ -0.27
PHACTR4-204ENST00000493669 WDR17Q8IZU2 1322 aa13.37□□□□□ -0.27
PHACTR4-204ENST00000493669 ADCY9O60503 1353 aa13.37□□□□□ -0.27
PHACTR4-204ENST00000493669 ALDH1L1O75891 902 aa13.37□□□□□ -0.27
PHACTR4-204ENST00000493669 ZNF790Q6PG37 636 aa13.37□□□□□ -0.27
PHACTR4-204ENST00000493669 LRRFIP2Q9Y608 721 aaKnown RBP13.37□□□□□ -0.27
PHACTR4-204ENST00000493669 PI4KAP2A4QPH2 592 aa13.36□□□□□ -0.27
PHACTR4-204ENST00000493669 NBR1Q14596 966 aa13.36□□□□□ -0.27
PHACTR4-204ENST00000493669 PI4KAP1Q8N8J0 262 aa13.36□□□□□ -0.27
PHACTR4-204ENST00000493669 SSH3Q8TE77 659 aa13.36□□□□□ -0.27
PHACTR4-204ENST00000493669 PRDM11Q9NQV5 511 aa13.36□□□□□ -0.27
PHACTR4-204ENST00000493669 DDX21Q9NR30 783 aaKnown RBP eCLIP13.36□□□□□ -0.27
PHACTR4-204ENST00000493669 KSR2Q6VAB6 950 aa13.36□□□□□ -0.27
PHACTR4-204ENST00000493669 LRRCC1Q9C099 1032 aa13.36□□□□□ -0.27
PHACTR4-204ENST00000493669 COL5A2P05997 1499 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms