RNA–Protein interactions for RNA: ENST00000493619.1

RTN4IP1-202, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 3

Gene RTN4IP1, Length 208 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-202ENST00000493619 NSD3Q9BZ95 1437 aa8.03□□□□□ -1.12
RTN4IP1-202ENST00000493619 NSD2O96028 1365 aa8.02□□□□□ -1.13
RTN4IP1-202ENST00000493619 USP47Q96K76 1375 aa8.02□□□□□ -1.13
RTN4IP1-202ENST00000493619 MAP3K5Q99683 1374 aa8.02□□□□□ -1.13
RTN4IP1-202ENST00000493619 KCNQ2O43526 872 aa8.02□□□□□ -1.13
RTN4IP1-202ENST00000493619 R3HDM1Q15032 1099 aaKnown RBP8.02□□□□□ -1.13
RTN4IP1-202ENST00000493619 TESK2Q96S53 571 aa8.02□□□□□ -1.13
RTN4IP1-202ENST00000493619 STK32BQ9NY57 414 aa8.02□□□□□ -1.13
RTN4IP1-202ENST00000493619 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.02□□□□□ -1.13
RTN4IP1-202ENST00000493619 FLT4P35916 1363 aa8.01□□□□□ -1.13
RTN4IP1-202ENST00000493619 ANKRD24Q8TF21 1146 aa8.01□□□□□ -1.13
RTN4IP1-202ENST00000493619 PPP1R1BQ9UD71 204 aaPredicted RBP8.01□□□□□ -1.13
RTN4IP1-202ENST00000493619 CIZ1Q9ULV3 898 aaPredicted RBP8.01□□□□□ -1.13
RTN4IP1-202ENST00000493619 RGPD5Q99666 1765 aa8.01□□□□□ -1.13
RTN4IP1-202ENST00000493619 KAT6BQ8WYB5 2073 aa8.01□□□□□ -1.13
RTN4IP1-202ENST00000493619 KIF20BQ96Q89 1820 aa8.01□□□□□ -1.13
RTN4IP1-202ENST00000493619 INSRP06213 1382 aa8□□□□□ -1.13
RTN4IP1-202ENST00000493619 ST20-MTHFSA0A0A6YYL1 179 aa8□□□□□ -1.13
RTN4IP1-202ENST00000493619 SNPHO15079 494 aa8□□□□□ -1.13
RTN4IP1-202ENST00000493619 AMPHP49418 695 aa8□□□□□ -1.13
RTN4IP1-202ENST00000493619 GOLGA2Q08379 1002 aa8□□□□□ -1.13
RTN4IP1-202ENST00000493619 FLAD1Q8NFF5 587 aa8□□□□□ -1.13
RTN4IP1-202ENST00000493619 TMEM121BQ9BXQ6 578 aaPredicted RBP8□□□□□ -1.13
RTN4IP1-202ENST00000493619 MTFR1LQ9H019 292 aa8□□□□□ -1.13
RTN4IP1-202ENST00000493619 NLRP2Q9NX02 1062 aa8□□□□□ -1.13
RTN4IP1-202ENST00000493619 AXIN2Q9Y2T1 843 aa8□□□□□ -1.13
RTN4IP1-202ENST00000493619 CASZ1Q86V15 1759 aa7.99□□□□□ -1.13
RTN4IP1-202ENST00000493619 ZBTB7CA1YPR0 619 aa7.99□□□□□ -1.13
RTN4IP1-202ENST00000493619 ERICH6Q7L0X2 663 aa7.99□□□□□ -1.13
RTN4IP1-202ENST00000493619 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.99□□□□□ -1.13
RTN4IP1-202ENST00000493619 PDCD7Q8N8D1 485 aaKnown RBP7.99□□□□□ -1.13
RTN4IP1-202ENST00000493619 MARCH10Q8NA82 808 aaPredicted RBP7.99□□□□□ -1.13
RTN4IP1-202ENST00000493619 SLC12A5Q9H2X9 1139 aa7.99□□□□□ -1.13
RTN4IP1-202ENST00000493619 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.99□□□□□ -1.13
RTN4IP1-202ENST00000493619 PCDH11XQ9BZA7 1347 aa7.99□□□□□ -1.13
RTN4IP1-202ENST00000493619 PCDH11YQ9BZA8 1340 aa7.99□□□□□ -1.13
RTN4IP1-202ENST00000493619 ANKRD26Q9UPS8 1709 aa7.98□□□□□ -1.13
RTN4IP1-202ENST00000493619 MKRN3Q13064 507 aaKnown RBP7.98□□□□□ -1.13
RTN4IP1-202ENST00000493619 SLC15A2Q16348 729 aa7.98□□□□□ -1.13
RTN4IP1-202ENST00000493619 TXNRD1Q16881 649 aa7.98□□□□□ -1.13
RTN4IP1-202ENST00000493619 NME9Q86XW9 330 aa7.98□□□□□ -1.13
RTN4IP1-202ENST00000493619 RAPGEF4Q8WZA2 1011 aa7.98□□□□□ -1.13
RTN4IP1-202ENST00000493619 PAPPAQ13219 1627 aa7.98□□□□□ -1.13
RTN4IP1-202ENST00000493619 PSDA5PKW4 1024 aaPredicted RBP7.97□□□□□ -1.13
RTN4IP1-202ENST00000493619 HOXC9P31274 260 aa7.97□□□□□ -1.13
RTN4IP1-202ENST00000493619 SMARCC1Q92922 1105 aaPredicted RBP7.97□□□□□ -1.13
RTN4IP1-202ENST00000493619 BTAF1O14981 1849 aa7.96□□□□□ -1.13
RTN4IP1-202ENST00000493619 NCAPD2Q15021 1401 aa7.96□□□□□ -1.13
RTN4IP1-202ENST00000493619 TATP17735 454 aaPredicted RBP7.96□□□□□ -1.14
RTN4IP1-202ENST00000493619 PSEN1P49768 467 aa7.96□□□□□ -1.14
RTN4IP1-202ENST00000493619 FAM182BQ5T319 152 aa7.96□□□□□ -1.14
RTN4IP1-202ENST00000493619 ZCRB1Q8TBF4 217 aaKnown RBP7.96□□□□□ -1.14
RTN4IP1-202ENST00000493619 L3MBTL3Q96JM7 780 aaPredicted RBP7.96□□□□□ -1.14
RTN4IP1-202ENST00000493619 MAP3K19Q56UN5 1328 aa7.96□□□□□ -1.14
RTN4IP1-202ENST00000493619 LY75O60449 1722 aa7.95□□□□□ -1.14
RTN4IP1-202ENST00000493619 COL24A1Q17RW2 1714 aa7.95□□□□□ -1.14
RTN4IP1-202ENST00000493619 HSP90AB1P08238 724 aaKnown RBP7.95□□□□□ -1.14
RTN4IP1-202ENST00000493619 POLD1P28340 1107 aa7.95□□□□□ -1.14
RTN4IP1-202ENST00000493619 PKD1L3Q7Z443 1732 aa7.95□□□□□ -1.14
RTN4IP1-202ENST00000493619 FYB1O15117 783 aa7.94□□□□□ -1.14
RTN4IP1-202ENST00000493619 EIF4G2P78344 907 aaKnown RBP eCLIP7.94□□□□□ -1.14
RTN4IP1-202ENST00000493619 TMEM132AQ24JP5 1023 aa7.94□□□□□ -1.14
RTN4IP1-202ENST00000493619 C3orf67Q6ZVT6 689 aa7.94□□□□□ -1.14
RTN4IP1-202ENST00000493619 SPG7Q9UQ90 795 aa7.94□□□□□ -1.14
RTN4IP1-202ENST00000493619 MYOM1P52179 1685 aa7.94□□□□□ -1.14
RTN4IP1-202ENST00000493619 ZNF831Q5JPB2 1677 aa7.94□□□□□ -1.14
RTN4IP1-202ENST00000493619 WASHC2AQ641Q2 1341 aa7.94□□□□□ -1.14
RTN4IP1-202ENST00000493619 SOX12O15370 315 aa7.93□□□□□ -1.14
RTN4IP1-202ENST00000493619 DOT1LQ8TEK3 1739 aa7.92□□□□□ -1.14
RTN4IP1-202ENST00000493619 PDAP1Q13442 181 aaKnown RBP7.92□□□□□ -1.14
RTN4IP1-202ENST00000493619 HOMEZQ8IX15 550 aa7.92□□□□□ -1.14
RTN4IP1-202ENST00000493619 NKX1-1Q15270 411 aaPredicted RBP7.91□□□□□ -1.14
RTN4IP1-202ENST00000493619 AMOTQ4VCS5 1084 aa7.91□□□□□ -1.14
RTN4IP1-202ENST00000493619 HS6ST3Q8IZP7 471 aa7.91□□□□□ -1.14
RTN4IP1-202ENST00000493619 SHANK3Q9BYB0 1731 aa7.91□□□□□ -1.14
RTN4IP1-202ENST00000493619 CHD4Q14839 1912 aa7.91□□□□□ -1.14
RTN4IP1-202ENST00000493619 GRIN3BO60391 1043 aa7.9□□□□□ -1.14
RTN4IP1-202ENST00000493619 YY1P25490 414 aa7.9□□□□□ -1.14
RTN4IP1-202ENST00000493619 DDX54Q8TDD1 881 aaKnown RBP7.9□□□□□ -1.14
RTN4IP1-202ENST00000493619 MARVELD3Q96A59 401 aa7.9□□□□□ -1.14
RTN4IP1-202ENST00000493619 TFCP2L1Q9NZI6 479 aa7.9□□□□□ -1.14
RTN4IP1-202ENST00000493619 C5P01031 1676 aa7.89□□□□□ -1.15
RTN4IP1-202ENST00000493619 MEGF6O75095 1541 aa7.89□□□□□ -1.15
RTN4IP1-202ENST00000493619 PTGER2P43116 358 aa7.89□□□□□ -1.15
RTN4IP1-202ENST00000493619 IFNL2Q8IZJ0 200 aa7.89□□□□□ -1.15
RTN4IP1-202ENST00000493619 ANO8Q9HCE9 1232 aaPredicted RBP7.89□□□□□ -1.15
RTN4IP1-202ENST00000493619 CCNL1Q9UK58 526 aaPredicted RBP7.89□□□□□ -1.15
RTN4IP1-202ENST00000493619 NPC1L1Q9UHC9 1359 aa7.88□□□□□ -1.15
RTN4IP1-202ENST00000493619 MAP2P11137 1827 aaKnown RBP7.88□□□□□ -1.15
RTN4IP1-202ENST00000493619 ERVV-2B6SEH9 535 aa7.88□□□□□ -1.15
RTN4IP1-202ENST00000493619 SSFA2P28290 1259 aa7.88□□□□□ -1.15
RTN4IP1-202ENST00000493619 PRIM1P49642 420 aaKnown RBP7.88□□□□□ -1.15
RTN4IP1-202ENST00000493619 GGNBP2Q9H3C7 697 aa7.88□□□□□ -1.15
RTN4IP1-202ENST00000493619 CD2APQ9Y5K6 639 aa7.88□□□□□ -1.15
RTN4IP1-202ENST00000493619 CICQ96RK0 1608 aaPredicted RBP7.88□□□□□ -1.15
RTN4IP1-202ENST00000493619 PALLDQ8WX93 1383 aa7.87□□□□□ -1.15
RTN4IP1-202ENST00000493619 NBPF6Q5VWK0 638 aa7.87□□□□□ -1.15
RTN4IP1-202ENST00000493619 SYTL4Q96C24 671 aaPredicted RBP7.87□□□□□ -1.15
RTN4IP1-202ENST00000493619 ACSBG1Q96GR2 724 aa7.87□□□□□ -1.15
RTN4IP1-202ENST00000493619 NBPF4Q96M43 638 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms