RNA–Protein interactions for RNA: ENST00000493594.6

GBP3-208, Transcript of guanylate binding protein 3, humanhuman

TSL 1 (best)

Gene GBP3, Length 2,561 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBP3-208ENST00000493594 SLC4A2P04920 1241 aa10.05□□□□□ -0.8
GBP3-208ENST00000493594 CGNQ9P2M7 1197 aaKnown RBP10.05□□□□□ -0.8
GBP3-208ENST00000493594 CHMP3Q9Y3E7 222 aa10.05□□□□□ -0.8
GBP3-208ENST00000493594 RPGRIP1LQ68CZ1 1315 aa10.05□□□□□ -0.8
GBP3-208ENST00000493594 HMMRO75330 724 aa10.05□□□□□ -0.8
GBP3-208ENST00000493594 CHMLP26374 656 aa10.05□□□□□ -0.8
GBP3-208ENST00000493594 NAA30Q147X3 362 aaPredicted RBP10.05□□□□□ -0.8
GBP3-208ENST00000493594 UNC5CLQ8IV45 518 aa10.05□□□□□ -0.8
GBP3-208ENST00000493594 ANKRD7Q92527 254 aa10.05□□□□□ -0.8
GBP3-208ENST00000493594 IL25Q9H293 177 aa10.05□□□□□ -0.8
GBP3-208ENST00000493594 ZRANB1Q9UGI0 708 aa10.05□□□□□ -0.8
GBP3-208ENST00000493594 NPATQ14207 1427 aa10.04□□□□□ -0.8
GBP3-208ENST00000493594 IL13P35225 146 aa10.04□□□□□ -0.8
GBP3-208ENST00000493594 UBE2HP62256 183 aa10.04□□□□□ -0.8
GBP3-208ENST00000493594 OSBPL3Q9H4L5 887 aa10.04□□□□□ -0.8
GBP3-208ENST00000493594 FANCAO15360 1455 aa10.04□□□□□ -0.8
GBP3-208ENST00000493594 CD163L1Q9NR16 1453 aa10.04□□□□□ -0.8
GBP3-208ENST00000493594 KIF24Q5T7B8 1368 aa10.04□□□□□ -0.8
GBP3-208ENST00000493594 ZBTB22O15209 634 aa10.04□□□□□ -0.8
GBP3-208ENST00000493594 MAP4K4O95819 1239 aaPredicted RBP10.04□□□□□ -0.8
GBP3-208ENST00000493594 ZSCAN22P10073 491 aaPredicted RBP10.04□□□□□ -0.8
GBP3-208ENST00000493594 PTGS1P23219 599 aa10.04□□□□□ -0.8
GBP3-208ENST00000493594 RRS1Q15050 365 aaKnown RBP10.04□□□□□ -0.8
GBP3-208ENST00000493594 MCM10Q7L590 875 aa10.04□□□□□ -0.8
GBP3-208ENST00000493594 MIS18AQ9NYP9 233 aa10.04□□□□□ -0.8
GBP3-208ENST00000493594 ARHGEF40Q8TER5 1519 aa10.03□□□□□ -0.8
GBP3-208ENST00000493594 PPLO60437 1756 aa10.03□□□□□ -0.8
GBP3-208ENST00000493594 SYT1P21579 422 aa10.03□□□□□ -0.8
GBP3-208ENST00000493594 C16orf45Q96MC5 204 aaPredicted RBP10.03□□□□□ -0.8
GBP3-208ENST00000493594 CAMSAP1Q5T5Y3 1602 aa10.03□□□□□ -0.8
GBP3-208ENST00000493594 ZCCHC11Q5TAX3 1644 aaKnown RBP10.03□□□□□ -0.8
GBP3-208ENST00000493594 CTIFO43310 598 aaKnown RBP10.03□□□□□ -0.8
GBP3-208ENST00000493594 STX6O43752 255 aa10.03□□□□□ -0.8
GBP3-208ENST00000493594 ANAPC15P60006 121 aa10.03□□□□□ -0.8
GBP3-208ENST00000493594 NCBP1Q09161 790 aaKnown RBP10.03□□□□□ -0.8
GBP3-208ENST00000493594 LMOD3Q0VAK6 560 aa10.03□□□□□ -0.8
GBP3-208ENST00000493594 LRMPQ12912 555 aa10.03□□□□□ -0.8
GBP3-208ENST00000493594 RIMS2Q9UQ26 1411 aa10.03□□□□□ -0.8
GBP3-208ENST00000493594 RPAP1Q9BWH6 1393 aaPredicted RBP10.02□□□□□ -0.8
GBP3-208ENST00000493594 DNM1Q05193 864 aaKnown RBP10.02□□□□□ -0.81
GBP3-208ENST00000493594 CAMK4Q16566 473 aa10.02□□□□□ -0.81
GBP3-208ENST00000493594 G2E3Q7L622 706 aa10.02□□□□□ -0.81
GBP3-208ENST00000493594 FUCA2Q9BTY2 467 aa10.02□□□□□ -0.81
GBP3-208ENST00000493594 LRRCC1Q9C099 1032 aa10.02□□□□□ -0.81
GBP3-208ENST00000493594 ARHGEF28Q8N1W1 1705 aaKnown RBP10.02□□□□□ -0.81
GBP3-208ENST00000493594 RGS12O14924 1447 aa10.02□□□□□ -0.81
GBP3-208ENST00000493594 CPA1P15085 419 aa10.02□□□□□ -0.81
GBP3-208ENST00000493594 DRC7Q8IY82 874 aa10.02□□□□□ -0.81
GBP3-208ENST00000493594 TMEM87AQ8NBN3 555 aa10.02□□□□□ -0.81
GBP3-208ENST00000493594 YEATS2Q9ULM3 1422 aa10.02□□□□□ -0.81
GBP3-208ENST00000493594 GOLGA6L6A8MZA4 724 aa10.01□□□□□ -0.81
GBP3-208ENST00000493594 GTF2E1P29083 439 aaPredicted RBP10.01□□□□□ -0.81
GBP3-208ENST00000493594 CCDC186Q7Z3E2 898 aa10.01□□□□□ -0.81
GBP3-208ENST00000493594 NME9Q86XW9 330 aa10.01□□□□□ -0.81
GBP3-208ENST00000493594 FEZ1Q99689 392 aa10.01□□□□□ -0.81
GBP3-208ENST00000493594 OGFRQ9NZT2 677 aa10.01□□□□□ -0.81
GBP3-208ENST00000493594 NRBP1Q9UHY1 535 aa10.01□□□□□ -0.81
GBP3-208ENST00000493594 ZFYVE9O95405 1425 aa10.01□□□□□ -0.81
GBP3-208ENST00000493594 F13A1P00488 732 aa10.01□□□□□ -0.81
GBP3-208ENST00000493594 IDI1Q13907 227 aa10.01□□□□□ -0.81
GBP3-208ENST00000493594 LUZP1Q86V48 1076 aa10.01□□□□□ -0.81
GBP3-208ENST00000493594 AEBP1Q8IUX7 1158 aa10.01□□□□□ -0.81
GBP3-208ENST00000493594 IL1RAPL2Q9NP60 686 aa10.01□□□□□ -0.81
GBP3-208ENST00000493594 SMC3Q9UQE7 1217 aa10.01□□□□□ -0.81
GBP3-208ENST00000493594 PNMA6EA0A0J9YXQ4 647 aa10□□□□□ -0.81
GBP3-208ENST00000493594 AK2P54819 239 aa10□□□□□ -0.81
GBP3-208ENST00000493594 ZNF592Q92610 1267 aa10□□□□□ -0.81
GBP3-208ENST00000493594 CTNNA3Q9UI47 895 aa10□□□□□ -0.81
GBP3-208ENST00000493594 YTHDC2Q9H6S0 1430 aaKnown RBP10□□□□□ -0.81
GBP3-208ENST00000493594 TPM3P06753 285 aa10□□□□□ -0.81
GBP3-208ENST00000493594 TNNT1P13805 278 aa10□□□□□ -0.81
GBP3-208ENST00000493594 VPS37CA5D8V6 355 aaPredicted RBP9.99□□□□□ -0.81
GBP3-208ENST00000493594 GNAI2P04899 355 aa9.99□□□□□ -0.81
GBP3-208ENST00000493594 CCDC192P0DO97 292 aa9.99□□□□□ -0.81
GBP3-208ENST00000493594 HSPA4P34932 840 aa9.99□□□□□ -0.81
GBP3-208ENST00000493594 NUTM1Q86Y26 1132 aa9.99□□□□□ -0.81
GBP3-208ENST00000493594 CKAP2LQ8IYA6 745 aa9.99□□□□□ -0.81
GBP3-208ENST00000493594 RASEFQ8IZ41 740 aa9.99□□□□□ -0.81
GBP3-208ENST00000493594 TMEM51Q9NW97 253 aa9.99□□□□□ -0.81
GBP3-208ENST00000493594 PTPRCP08575 1304 aa9.99□□□□□ -0.81
GBP3-208ENST00000493594 ABCC3O15438 1527 aa9.99□□□□□ -0.81
GBP3-208ENST00000493594 VGLL3A8MV65 326 aa9.99□□□□□ -0.81
GBP3-208ENST00000493594 SULT6B1Q6IMI4 303 aa9.99□□□□□ -0.81
GBP3-208ENST00000493594 RUFY3Q7L099 469 aa9.99□□□□□ -0.81
GBP3-208ENST00000493594 WAPLQ7Z5K2 1190 aa9.99□□□□□ -0.81
GBP3-208ENST00000493594 CCDC83Q8IWF9 413 aa9.99□□□□□ -0.81
GBP3-208ENST00000493594 SALL3Q9BXA9 1300 aa9.99□□□□□ -0.81
GBP3-208ENST00000493594 CHL1O00533 1208 aa9.98□□□□□ -0.81
GBP3-208ENST00000493594 LARGE1O95461 756 aa9.98□□□□□ -0.81
GBP3-208ENST00000493594 GJB2P29033 226 aa9.98□□□□□ -0.81
GBP3-208ENST00000493594 FAM173BQ6P4H8 233 aa9.98□□□□□ -0.81
GBP3-208ENST00000493594 DDX54Q8TDD1 881 aaKnown RBP9.98□□□□□ -0.81
GBP3-208ENST00000493594 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.98□□□□□ -0.81
GBP3-208ENST00000493594 LIMCH1Q9UPQ0 1083 aa9.98□□□□□ -0.81
GBP3-208ENST00000493594 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.98□□□□□ -0.81
GBP3-208ENST00000493594 ATP6V1DQ9Y5K8 247 aa9.98□□□□□ -0.81
GBP3-208ENST00000493594 SNX14Q9Y5W7 946 aa9.98□□□□□ -0.81
GBP3-208ENST00000493594 V9GYY5 206 aaPredicted RBP9.98□□□□□ -0.81
GBP3-208ENST00000493594 MAP2P11137 1827 aaKnown RBP9.98□□□□□ -0.81
GBP3-208ENST00000493594 NECTIN2Q92692 538 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms