RNA–Protein interactions for RNA: ENST00000493511.1

GTF3C2-212, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 3

Gene GTF3C2, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-212ENST00000493511 ATF5Q9Y2D1 282 aaPredicted RBP24.08■■□□□ 1.45
GTF3C2-212ENST00000493511 SCN11AQ9UI33 1791 aa24.08■■□□□ 1.44
GTF3C2-212ENST00000493511 PRKAR2BP31323 418 aa24.07■■□□□ 1.44
GTF3C2-212ENST00000493511 ATP6V1AP38606 617 aa24.07■■□□□ 1.44
GTF3C2-212ENST00000493511 RSPH6AQ9H0K4 717 aa24.07■■□□□ 1.44
GTF3C2-212ENST00000493511 RNMTO43148 476 aaKnown RBP24.06■■□□□ 1.44
GTF3C2-212ENST00000493511 FCHSD2O94868 740 aa24.06■■□□□ 1.44
GTF3C2-212ENST00000493511 FLAD1Q8NFF5 587 aa24.06■■□□□ 1.44
GTF3C2-212ENST00000493511 AK7Q96M32 723 aa24.06■■□□□ 1.44
GTF3C2-212ENST00000493511 SLC52A2Q9HAB3 445 aa24.06■■□□□ 1.44
GTF3C2-212ENST00000493511 RBM42Q9BTD8 480 aaKnown RBP24.05■■□□□ 1.44
GTF3C2-212ENST00000493511 LGR6Q9HBX8 967 aa24.05■■□□□ 1.44
GTF3C2-212ENST00000493511 TUBGCP6Q96RT7 1819 aa24.05■■□□□ 1.44
GTF3C2-212ENST00000493511 MAP3K5Q99683 1374 aa24.04■■□□□ 1.44
GTF3C2-212ENST00000493511 C4BP0C0L5 1744 aa24.04■■□□□ 1.44
GTF3C2-212ENST00000493511 PTGER2P43116 358 aa24.04■■□□□ 1.44
GTF3C2-212ENST00000493511 GNAT3A8MTJ3 354 aa24.03■■□□□ 1.44
GTF3C2-212ENST00000493511 LINC00116Q8NCU8 138 aa24.03■■□□□ 1.44
GTF3C2-212ENST00000493511 MRC1P22897 1456 aa24.02■■□□□ 1.44
GTF3C2-212ENST00000493511 MSH5O43196 834 aa24.02■■□□□ 1.44
GTF3C2-212ENST00000493511 ITPK1Q13572 414 aa24.02■■□□□ 1.44
GTF3C2-212ENST00000493511 PHACTR3Q96KR7 559 aa24.01■■□□□ 1.43
GTF3C2-212ENST00000493511 ZNF831Q5JPB2 1677 aa24.01■■□□□ 1.43
GTF3C2-212ENST00000493511 ADAMTS7Q9UKP4 1686 aa24.01■■□□□ 1.43
GTF3C2-212ENST00000493511 PTCD1O75127 700 aaKnown RBP24■■□□□ 1.43
GTF3C2-212ENST00000493511 COL23A1Q86Y22 540 aaPredicted RBP24■■□□□ 1.43
GTF3C2-212ENST00000493511 NEFMP07197 916 aa23.99■■□□□ 1.43
GTF3C2-212ENST00000493511 SGIP1Q9BQI5 828 aa23.99■■□□□ 1.43
GTF3C2-212ENST00000493511 VIRMAQ69YN4 1812 aaKnown RBP23.98■■□□□ 1.43
GTF3C2-212ENST00000493511 SSFA2P28290 1259 aa23.98■■□□□ 1.43
GTF3C2-212ENST00000493511 POLD1P28340 1107 aa23.98■■□□□ 1.43
GTF3C2-212ENST00000493511 SLC4A9Q96Q91 983 aa23.98■■□□□ 1.43
GTF3C2-212ENST00000493511 MYBBP1AQ9BQG0 1328 aaKnown RBP23.98■■□□□ 1.43
GTF3C2-212ENST00000493511 GNPATO15228 680 aa23.97■■□□□ 1.43
GTF3C2-212ENST00000493511 TEFQ10587 303 aa23.97■■□□□ 1.43
GTF3C2-212ENST00000493511 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.96■■□□□ 1.43
GTF3C2-212ENST00000493511 PNNQ9H307 717 aaKnown RBP23.96■■□□□ 1.43
GTF3C2-212ENST00000493511 UBR3Q6ZT12 1888 aa23.96■■□□□ 1.43
GTF3C2-212ENST00000493511 PHF14O94880 888 aa23.95■■□□□ 1.42
GTF3C2-212ENST00000493511 RC3H1Q5TC82 1133 aaKnown RBP23.95■■□□□ 1.42
GTF3C2-212ENST00000493511 IL17REQ8NFR9 667 aa23.95■■□□□ 1.42
GTF3C2-212ENST00000493511 ARXQ96QS3 562 aa23.95■■□□□ 1.42
GTF3C2-212ENST00000493511 CNTNAP4Q9C0A0 1308 aa23.94■■□□□ 1.42
GTF3C2-212ENST00000493511 RTF1Q92541 710 aaKnown RBP23.94■■□□□ 1.42
GTF3C2-212ENST00000493511 SLC39A6Q13433 755 aa23.93■■□□□ 1.42
GTF3C2-212ENST00000493511 RTCBQ9Y3I0 505 aaKnown RBP23.93■■□□□ 1.42
GTF3C2-212ENST00000493511 CEMIPQ8WUJ3 1361 aa23.92■■□□□ 1.42
GTF3C2-212ENST00000493511 AMIGO3Q86WK7 504 aa23.92■■□□□ 1.42
GTF3C2-212ENST00000493511 TTC5Q8N0Z6 440 aa23.92■■□□□ 1.42
GTF3C2-212ENST00000493511 COL5A3P25940 1745 aaPredicted RBP23.92■■□□□ 1.42
GTF3C2-212ENST00000493511 COL24A1Q17RW2 1714 aa23.91■■□□□ 1.42
GTF3C2-212ENST00000493511 PRKRIP1Q9H875 184 aaPredicted RBP23.91■■□□□ 1.42
GTF3C2-212ENST00000493511 ZNF316A6NFI3 1004 aaPredicted RBP23.9■■□□□ 1.42
GTF3C2-212ENST00000493511 HTATSF1O43719 755 aaKnown RBP23.9■■□□□ 1.42
GTF3C2-212ENST00000493511 FHDC1Q9C0D6 1143 aaPredicted RBP23.9■■□□□ 1.42
GTF3C2-212ENST00000493511 CICQ96RK0 1608 aaPredicted RBP23.9■■□□□ 1.42
GTF3C2-212ENST00000493511 ADRA2BP18089 450 aa23.89■■□□□ 1.41
GTF3C2-212ENST00000493511 TRAPPC3LQ5T215 181 aa23.89■■□□□ 1.41
GTF3C2-212ENST00000493511 MSL1Q68DK7 614 aa23.89■■□□□ 1.41
GTF3C2-212ENST00000493511 MAPK8IP3Q9UPT6 1336 aa23.88■■□□□ 1.41
GTF3C2-212ENST00000493511 RPS6KA4O75676 772 aa23.88■■□□□ 1.41
GTF3C2-212ENST00000493511 CRKLP46109 303 aaKnown RBP23.88■■□□□ 1.41
GTF3C2-212ENST00000493511 VSIG10Q8N0Z9 540 aa23.88■■□□□ 1.41
GTF3C2-212ENST00000493511 PLEKHF1Q96S99 279 aa23.88■■□□□ 1.41
GTF3C2-212ENST00000493511 KCPQ6ZWJ8 1503 aa23.88■■□□□ 1.41
GTF3C2-212ENST00000493511 DCAF8L1A6NGE4 600 aa23.87■■□□□ 1.41
GTF3C2-212ENST00000493511 ZNF790Q6PG37 636 aa23.87■■□□□ 1.41
GTF3C2-212ENST00000493511 SMIM5Q71RC9 77 aa23.87■■□□□ 1.41
GTF3C2-212ENST00000493511 SYT17Q9BSW7 474 aa23.87■■□□□ 1.41
GTF3C2-212ENST00000493511 TJP1Q07157 1748 aa23.87■■□□□ 1.41
GTF3C2-212ENST00000493511 SIPA1L3O60292 1781 aaPredicted RBP23.86■■□□□ 1.41
GTF3C2-212ENST00000493511 MCM10Q7L590 875 aa23.86■■□□□ 1.41
GTF3C2-212ENST00000493511 DNAJC10Q8IXB1 793 aa23.86■■□□□ 1.41
GTF3C2-212ENST00000493511 MYH14Q7Z406 1995 aaKnown RBP23.85■■□□□ 1.41
GTF3C2-212ENST00000493511 BTBD11A6QL63 1104 aa23.85■■□□□ 1.41
GTF3C2-212ENST00000493511 GOLGB1Q14789 3259 aaKnown RBP23.85■■□□□ 1.41
GTF3C2-212ENST00000493511 UBR2Q8IWV8 1755 aa23.85■■□□□ 1.41
GTF3C2-212ENST00000493511 NFE2L2Q16236 605 aa23.84■■□□□ 1.41
GTF3C2-212ENST00000493511 UTRNP46939 3433 aa23.84■■□□□ 1.41
GTF3C2-212ENST00000493511 RFC4P35249 363 aa23.83■■□□□ 1.41
GTF3C2-212ENST00000493511 WDR43Q15061 677 aaKnown RBP eCLIP23.83■■□□□ 1.41
GTF3C2-212ENST00000493511 CCDC87Q9NVE4 849 aa23.83■■□□□ 1.41
GTF3C2-212ENST00000493511 CYP19A1P11511 503 aaPredicted RBP23.82■■□□□ 1.4
GTF3C2-212ENST00000493511 KLHL34Q8N239 644 aa23.82■■□□□ 1.4
GTF3C2-212ENST00000493511 ARHGEF1Q92888 912 aaKnown RBP23.82■■□□□ 1.4
GTF3C2-212ENST00000493511 ZNF496Q96IT1 587 aaPredicted RBP23.82■■□□□ 1.4
GTF3C2-212ENST00000493511 FMNL2Q96PY5 1086 aa23.82■■□□□ 1.4
GTF3C2-212ENST00000493511 STARD3NLO95772 234 aa23.81■■□□□ 1.4
GTF3C2-212ENST00000493511 DCTN1Q14203 1278 aa23.81■■□□□ 1.4
GTF3C2-212ENST00000493511 INTS5Q6P9B9 1019 aaKnown RBP23.81■■□□□ 1.4
GTF3C2-212ENST00000493511 TEX13AQ9BXU3 409 aaPredicted RBP23.81■■□□□ 1.4
GTF3C2-212ENST00000493511 HEG1Q9ULI3 1381 aa23.8■■□□□ 1.4
GTF3C2-212ENST00000493511 NLGN1Q8N2Q7 840 aa23.79■■□□□ 1.4
GTF3C2-212ENST00000493511 TAF7Q15545 349 aaPredicted RBP23.78■■□□□ 1.4
GTF3C2-212ENST00000493511 DLG5Q8TDM6 1919 aa23.78■■□□□ 1.4
GTF3C2-212ENST00000493511 SOS1Q07889 1333 aaPredicted RBP23.76■■□□□ 1.39
GTF3C2-212ENST00000493511 GYS1P13807 737 aa23.75■■□□□ 1.39
GTF3C2-212ENST00000493511 PNISRQ8TF01 805 aaKnown RBP23.75■■□□□ 1.39
GTF3C2-212ENST00000493511 ZBTB1Q9Y2K1 713 aa23.75■■□□□ 1.39
GTF3C2-212ENST00000493511 CD2APQ9Y5K6 639 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms