RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 ZNF827Q17R98 1081 aa14.21□□□□□ -0.13
CDC42SE1-206ENST00000492796 PRKRIP1Q9H875 184 aaPredicted RBP14.21□□□□□ -0.13
CDC42SE1-206ENST00000492796 SIPA1L3O60292 1781 aaPredicted RBP14.2□□□□□ -0.14
CDC42SE1-206ENST00000492796 LOC102724428A0A0B4J2F2 783 aa14.2□□□□□ -0.14
CDC42SE1-206ENST00000492796 RNMTO43148 476 aaKnown RBP14.2□□□□□ -0.14
CDC42SE1-206ENST00000492796 SIK1P57059 783 aa14.2□□□□□ -0.14
CDC42SE1-206ENST00000492796 ATG3Q9NT62 314 aa14.2□□□□□ -0.14
CDC42SE1-206ENST00000492796 ASAP1Q9ULH1 1129 aa14.2□□□□□ -0.14
CDC42SE1-206ENST00000492796 COL5A3P25940 1745 aaPredicted RBP14.19□□□□□ -0.14
CDC42SE1-206ENST00000492796 GNAT3A8MTJ3 354 aa14.19□□□□□ -0.14
CDC42SE1-206ENST00000492796 NEFMP07197 916 aa14.19□□□□□ -0.14
CDC42SE1-206ENST00000492796 KCNQ4P56696 695 aa14.19□□□□□ -0.14
CDC42SE1-206ENST00000492796 NFATC2IPQ8NCF5 419 aa14.19□□□□□ -0.14
CDC42SE1-206ENST00000492796 PHACTR3Q96KR7 559 aa14.19□□□□□ -0.14
CDC42SE1-206ENST00000492796 PNNQ9H307 717 aaKnown RBP14.19□□□□□ -0.14
CDC42SE1-206ENST00000492796 SLC52A2Q9HAB3 445 aa14.19□□□□□ -0.14
CDC42SE1-206ENST00000492796 LGR6Q9HBX8 967 aa14.18□□□□□ -0.14
CDC42SE1-206ENST00000492796 UBR2Q8IWV8 1755 aa14.17□□□□□ -0.14
CDC42SE1-206ENST00000492796 SPON1Q9HCB6 807 aa14.17□□□□□ -0.14
CDC42SE1-206ENST00000492796 TFCP2L1Q9NZI6 479 aa14.17□□□□□ -0.14
CDC42SE1-206ENST00000492796 PNPLA7Q6ZV29 1317 aa14.16□□□□□ -0.14
CDC42SE1-206ENST00000492796 UBR3Q6ZT12 1888 aa14.16□□□□□ -0.14
CDC42SE1-206ENST00000492796 TJP1Q07157 1748 aa14.16□□□□□ -0.14
CDC42SE1-206ENST00000492796 DLG5Q8TDM6 1919 aa14.16□□□□□ -0.14
CDC42SE1-206ENST00000492796 ATP6V1AP38606 617 aa14.16□□□□□ -0.14
CDC42SE1-206ENST00000492796 CEMIPQ8WUJ3 1361 aa14.16□□□□□ -0.14
CDC42SE1-206ENST00000492796 COL24A1Q17RW2 1714 aa14.15□□□□□ -0.14
CDC42SE1-206ENST00000492796 TEFQ10587 303 aa14.15□□□□□ -0.14
CDC42SE1-206ENST00000492796 PLEKHF1Q96S99 279 aa14.15□□□□□ -0.14
CDC42SE1-206ENST00000492796 MTFR1LQ9H019 292 aa14.15□□□□□ -0.14
CDC42SE1-206ENST00000492796 KCPQ6ZWJ8 1503 aa14.15□□□□□ -0.14
CDC42SE1-206ENST00000492796 HTATSF1O43719 755 aaKnown RBP14.14□□□□□ -0.15
CDC42SE1-206ENST00000492796 ITPK1Q13572 414 aa14.14□□□□□ -0.15
CDC42SE1-206ENST00000492796 LINC00116Q8NCU8 138 aa14.14□□□□□ -0.15
CDC42SE1-206ENST00000492796 FLAD1Q8NFF5 587 aa14.14□□□□□ -0.15
CDC42SE1-206ENST00000492796 IL17REQ8NFR9 667 aa14.14□□□□□ -0.15
CDC42SE1-206ENST00000492796 SLC16A10Q8TF71 515 aa14.14□□□□□ -0.15
CDC42SE1-206ENST00000492796 RTF1Q92541 710 aaKnown RBP14.14□□□□□ -0.15
CDC42SE1-206ENST00000492796 AK7Q96M32 723 aa14.14□□□□□ -0.15
CDC42SE1-206ENST00000492796 RBM42Q9BTD8 480 aaKnown RBP14.14□□□□□ -0.15
CDC42SE1-206ENST00000492796 PDGFDQ9GZP0 370 aaPredicted RBP14.14□□□□□ -0.15
CDC42SE1-206ENST00000492796 MAPK8IP3Q9UPT6 1336 aa14.14□□□□□ -0.15
CDC42SE1-206ENST00000492796 ZBTB7AO95365 584 aa14.13□□□□□ -0.15
CDC42SE1-206ENST00000492796 WDR43Q15061 677 aaKnown RBP eCLIP14.12□□□□□ -0.15
CDC42SE1-206ENST00000492796 SLC4A9Q96Q91 983 aa14.12□□□□□ -0.15
CDC42SE1-206ENST00000492796 CNTNAP4Q9C0A0 1308 aa14.12□□□□□ -0.15
CDC42SE1-206ENST00000492796 PTCD1O75127 700 aaKnown RBP14.11□□□□□ -0.15
CDC42SE1-206ENST00000492796 SSFA2P28290 1259 aa14.11□□□□□ -0.15
CDC42SE1-206ENST00000492796 NFE2L2Q16236 605 aa14.11□□□□□ -0.15
CDC42SE1-206ENST00000492796 TTC5Q8N0Z6 440 aa14.11□□□□□ -0.15
CDC42SE1-206ENST00000492796 RC3H1Q5TC82 1133 aaKnown RBP14.1□□□□□ -0.15
CDC42SE1-206ENST00000492796 VSIG10Q8N0Z9 540 aa14.1□□□□□ -0.15
CDC42SE1-206ENST00000492796 GNPATO15228 680 aa14.09□□□□□ -0.15
CDC42SE1-206ENST00000492796 ANP32CO43423 234 aa14.09□□□□□ -0.15
CDC42SE1-206ENST00000492796 PTGER2P43116 358 aa14.09□□□□□ -0.15
CDC42SE1-206ENST00000492796 SLC39A6Q13433 755 aa14.09□□□□□ -0.15
CDC42SE1-206ENST00000492796 ZNF790Q6PG37 636 aa14.09□□□□□ -0.15
CDC42SE1-206ENST00000492796 MCM10Q7L590 875 aa14.09□□□□□ -0.15
CDC42SE1-206ENST00000492796 COL23A1Q86Y22 540 aaPredicted RBP14.09□□□□□ -0.15
CDC42SE1-206ENST00000492796 PPP1R1BQ9UD71 204 aaPredicted RBP14.09□□□□□ -0.15
CDC42SE1-206ENST00000492796 C4AP0C0L4 1744 aa14.08□□□□□ -0.16
CDC42SE1-206ENST00000492796 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.08□□□□□ -0.16
CDC42SE1-206ENST00000492796 BTBD11A6QL63 1104 aa14.08□□□□□ -0.16
CDC42SE1-206ENST00000492796 MSH5O43196 834 aa14.08□□□□□ -0.16
CDC42SE1-206ENST00000492796 SGIP1Q9BQI5 828 aa14.08□□□□□ -0.16
CDC42SE1-206ENST00000492796 ATF5Q9Y2D1 282 aaPredicted RBP14.08□□□□□ -0.16
CDC42SE1-206ENST00000492796 MYH14Q7Z406 1995 aaKnown RBP14.08□□□□□ -0.16
CDC42SE1-206ENST00000492796 KDM3BQ7LBC6 1761 aa14.07□□□□□ -0.16
CDC42SE1-206ENST00000492796 RUNDC1Q96C34 613 aa14.07□□□□□ -0.16
CDC42SE1-206ENST00000492796 RTCBQ9Y3I0 505 aaKnown RBP14.07□□□□□ -0.16
CDC42SE1-206ENST00000492796 HEG1Q9ULI3 1381 aa14.07□□□□□ -0.16
CDC42SE1-206ENST00000492796 PHF14O94880 888 aa14.06□□□□□ -0.16
CDC42SE1-206ENST00000492796 POLD1P28340 1107 aa14.06□□□□□ -0.16
CDC42SE1-206ENST00000492796 CRKLP46109 303 aaKnown RBP14.06□□□□□ -0.16
CDC42SE1-206ENST00000492796 LMOD3Q0VAK6 560 aa14.06□□□□□ -0.16
CDC42SE1-206ENST00000492796 DCTN1Q14203 1278 aa14.06□□□□□ -0.16
CDC42SE1-206ENST00000492796 AMIGO3Q86WK7 504 aa14.06□□□□□ -0.16
CDC42SE1-206ENST00000492796 DNAJC10Q8IXB1 793 aa14.06□□□□□ -0.16
CDC42SE1-206ENST00000492796 RPS6KA4O75676 772 aa14.05□□□□□ -0.16
CDC42SE1-206ENST00000492796 ZNF496Q96IT1 587 aaPredicted RBP14.05□□□□□ -0.16
CDC42SE1-206ENST00000492796 FMNL2Q96PY5 1086 aa14.05□□□□□ -0.16
CDC42SE1-206ENST00000492796 TEX13AQ9BXU3 409 aaPredicted RBP14.05□□□□□ -0.16
CDC42SE1-206ENST00000492796 ADAMTS8Q9UP79 889 aa14.05□□□□□ -0.16
CDC42SE1-206ENST00000492796 LAMB4A4D0S4 1761 aa14.04□□□□□ -0.16
CDC42SE1-206ENST00000492796 CYP19A1P11511 503 aaPredicted RBP14.04□□□□□ -0.16
CDC42SE1-206ENST00000492796 TMPOP42166 694 aaKnown RBP14.04□□□□□ -0.16
CDC42SE1-206ENST00000492796 RIPK4P57078 832 aa14.04□□□□□ -0.16
CDC42SE1-206ENST00000492796 TAF7Q15545 349 aaPredicted RBP14.04□□□□□ -0.16
CDC42SE1-206ENST00000492796 TRAPPC3LQ5T215 181 aa14.04□□□□□ -0.16
CDC42SE1-206ENST00000492796 PNISRQ8TF01 805 aaKnown RBP14.04□□□□□ -0.16
CDC42SE1-206ENST00000492796 CCDC87Q9NVE4 849 aa14.04□□□□□ -0.16
CDC42SE1-206ENST00000492796 STARD3NLO95772 234 aa14.03□□□□□ -0.16
CDC42SE1-206ENST00000492796 CCDC146Q8IYE0 955 aa14.03□□□□□ -0.16
CDC42SE1-206ENST00000492796 ARXQ96QS3 562 aa14.03□□□□□ -0.16
CDC42SE1-206ENST00000492796 INTS5Q6P9B9 1019 aaKnown RBP14.02□□□□□ -0.17
CDC42SE1-206ENST00000492796 SOS1Q07889 1333 aaPredicted RBP14.01□□□□□ -0.17
CDC42SE1-206ENST00000492796 RFC4P35249 363 aa14.01□□□□□ -0.17
CDC42SE1-206ENST00000492796 MSL1Q68DK7 614 aa14.01□□□□□ -0.17
CDC42SE1-206ENST00000492796 SMIM5Q71RC9 77 aa14.01□□□□□ -0.17
CDC42SE1-206ENST00000492796 ARHGEF1Q92888 912 aaKnown RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms