RNA–Protein interactions for RNA: ENST00000492150.1

CACNA1C-228, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2

Gene CACNA1C, Length 819 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-228ENST00000492150 SMARCC1Q92922 1105 aaPredicted RBP16.73■□□□□ 0.27
CACNA1C-228ENST00000492150 ITGB4P16144 1822 aa16.73■□□□□ 0.27
CACNA1C-228ENST00000492150 POTECB2RU33 542 aa16.72■□□□□ 0.27
CACNA1C-228ENST00000492150 NLGN1Q8N2Q7 840 aa16.72■□□□□ 0.27
CACNA1C-228ENST00000492150 SIN3AQ96ST3 1273 aa16.72■□□□□ 0.27
CACNA1C-228ENST00000492150 MEGF6O75095 1541 aa16.71■□□□□ 0.27
CACNA1C-228ENST00000492150 CHADLQ6NUI6 762 aa16.71■□□□□ 0.27
CACNA1C-228ENST00000492150 ROCK2O75116 1388 aaKnown RBP16.71■□□□□ 0.27
CACNA1C-228ENST00000492150 CCDC88AQ3V6T2 1871 aa16.71■□□□□ 0.27
CACNA1C-228ENST00000492150 MAP2K1Q02750 393 aaPredicted RBP16.7■□□□□ 0.26
CACNA1C-228ENST00000492150 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.7■□□□□ 0.26
CACNA1C-228ENST00000492150 PASKQ96RG2 1323 aa16.7■□□□□ 0.26
CACNA1C-228ENST00000492150 LMNB1P20700 586 aa16.69■□□□□ 0.26
CACNA1C-228ENST00000492150 PRPF38BQ5VTL8 546 aaKnown RBP16.69■□□□□ 0.26
CACNA1C-228ENST00000492150 NME9Q86XW9 330 aa16.69■□□□□ 0.26
CACNA1C-228ENST00000492150 CGNL1Q0VF96 1302 aa16.69■□□□□ 0.26
CACNA1C-228ENST00000492150 THSD7BQ9C0I4 1608 aa16.68■□□□□ 0.26
CACNA1C-228ENST00000492150 RGPD2P0DJD1 1756 aa16.68■□□□□ 0.26
CACNA1C-228ENST00000492150 CD163L1Q9NR16 1453 aa16.67■□□□□ 0.26
CACNA1C-228ENST00000492150 SBNO2Q9Y2G9 1366 aa16.67■□□□□ 0.26
CACNA1C-228ENST00000492150 TMF1P82094 1093 aa16.67■□□□□ 0.26
CACNA1C-228ENST00000492150 GNPATO15228 680 aa16.66■□□□□ 0.26
CACNA1C-228ENST00000492150 LINC00116Q8NCU8 138 aa16.66■□□□□ 0.26
CACNA1C-228ENST00000492150 IP6K1Q92551 441 aa16.66■□□□□ 0.26
CACNA1C-228ENST00000492150 DICER1Q9UPY3 1922 aaKnown RBP16.65■□□□□ 0.26
CACNA1C-228ENST00000492150 TMEM88BA6NKF7 163 aa16.65■□□□□ 0.26
CACNA1C-228ENST00000492150 NEUROD1Q13562 356 aa16.65■□□□□ 0.26
CACNA1C-228ENST00000492150 PARP3Q9Y6F1 533 aa16.65■□□□□ 0.26
CACNA1C-228ENST00000492150 RASSF10A6NK89 507 aa16.64■□□□□ 0.25
CACNA1C-228ENST00000492150 RASSF7Q02833 373 aa16.64■□□□□ 0.25
CACNA1C-228ENST00000492150 LOC102724428A0A0B4J2F2 783 aa16.63■□□□□ 0.25
CACNA1C-228ENST00000492150 SIK1P57059 783 aa16.63■□□□□ 0.25
CACNA1C-228ENST00000492150 DPY19L2Q6NUT2 758 aa16.63■□□□□ 0.25
CACNA1C-228ENST00000492150 MPRIPQ6WCQ1 1025 aa16.63■□□□□ 0.25
CACNA1C-228ENST00000492150 SLC12A5Q9H2X9 1139 aa16.63■□□□□ 0.25
CACNA1C-228ENST00000492150 CFAP44Q96MT7 982 aa16.62■□□□□ 0.25
CACNA1C-228ENST00000492150 ADRA2BP18089 450 aa16.61■□□□□ 0.25
CACNA1C-228ENST00000492150 TMC1Q8TDI8 760 aa16.61■□□□□ 0.25
CACNA1C-228ENST00000492150 PCDH11XQ9BZA7 1347 aa16.61■□□□□ 0.25
CACNA1C-228ENST00000492150 PCDH11YQ9BZA8 1340 aa16.61■□□□□ 0.25
CACNA1C-228ENST00000492150 DLEC1Q9Y238 1755 aa16.61■□□□□ 0.25
CACNA1C-228ENST00000492150 EDC4Q6P2E9 1401 aaKnown RBP16.61■□□□□ 0.25
CACNA1C-228ENST00000492150 GYS1P13807 737 aa16.6■□□□□ 0.25
CACNA1C-228ENST00000492150 TRAPPC3LQ5T215 181 aa16.6■□□□□ 0.25
CACNA1C-228ENST00000492150 HDGFL2Q7Z4V5 671 aaPredicted RBP16.6■□□□□ 0.25
CACNA1C-228ENST00000492150 MCOLN1Q9GZU1 580 aa16.6■□□□□ 0.25
CACNA1C-228ENST00000492150 ZNF831Q5JPB2 1677 aa16.59■□□□□ 0.25
CACNA1C-228ENST00000492150 WDR33Q9C0J8 1336 aaKnown RBP16.59■□□□□ 0.25
CACNA1C-228ENST00000492150 SCN4AP35499 1836 aa16.59■□□□□ 0.25
CACNA1C-228ENST00000492150 POTEIP0CG38 1075 aa16.58■□□□□ 0.24
CACNA1C-228ENST00000492150 POTEJP0CG39 1038 aa16.58■□□□□ 0.24
CACNA1C-228ENST00000492150 ITPK1Q13572 414 aa16.58■□□□□ 0.24
CACNA1C-228ENST00000492150 DEFB115Q30KQ5 88 aa16.58■□□□□ 0.24
CACNA1C-228ENST00000492150 LDHDQ86WU2 507 aa16.58■□□□□ 0.24
CACNA1C-228ENST00000492150 LTV1Q96GA3 475 aaPredicted RBP16.58■□□□□ 0.24
CACNA1C-228ENST00000492150 CARD11Q9BXL7 1154 aa16.58■□□□□ 0.24
CACNA1C-228ENST00000492150 RTCBQ9Y3I0 505 aaKnown RBP16.58■□□□□ 0.24
CACNA1C-228ENST00000492150 A0A1W2PP64 1363 aa16.58■□□□□ 0.24
CACNA1C-228ENST00000492150 SMG6Q86US8 1419 aaKnown RBP16.57■□□□□ 0.24
CACNA1C-228ENST00000492150 TERF2IPQ9NYB0 399 aa16.57■□□□□ 0.24
CACNA1C-228ENST00000492150 LTBP1Q14766 1721 aa16.56■□□□□ 0.24
CACNA1C-228ENST00000492150 ITGBL1O95965 494 aaPredicted RBP16.56■□□□□ 0.24
CACNA1C-228ENST00000492150 CHRNA5P30532 468 aa16.56■□□□□ 0.24
CACNA1C-228ENST00000492150 PIGBQ92521 554 aa16.56■□□□□ 0.24
CACNA1C-228ENST00000492150 BEGAINQ9BUH8 593 aa16.56■□□□□ 0.24
CACNA1C-228ENST00000492150 MAP3K19Q56UN5 1328 aa16.55■□□□□ 0.24
CACNA1C-228ENST00000492150 ARHGEF1Q92888 912 aaKnown RBP16.55■□□□□ 0.24
CACNA1C-228ENST00000492150 COL5A3P25940 1745 aaPredicted RBP16.55■□□□□ 0.24
CACNA1C-228ENST00000492150 ATP6V1AP38606 617 aa16.54■□□□□ 0.24
CACNA1C-228ENST00000492150 RAPGEF4Q8WZA2 1011 aa16.54■□□□□ 0.24
CACNA1C-228ENST00000492150 GCC1Q96CN9 775 aa16.54■□□□□ 0.24
CACNA1C-228ENST00000492150 PUS7Q96PZ0 661 aaKnown RBP16.54■□□□□ 0.24
CACNA1C-228ENST00000492150 ADAMTSL1Q8N6G6 1762 aa16.54■□□□□ 0.24
CACNA1C-228ENST00000492150 CASP8AP2Q9UKL3 1982 aa16.53■□□□□ 0.24
CACNA1C-228ENST00000492150 FBLN1P23142 703 aa16.53■□□□□ 0.24
CACNA1C-228ENST00000492150 IQCA1LA6NCM1 817 aa16.52■□□□□ 0.24
CACNA1C-228ENST00000492150 NFKBIEO00221 500 aa16.52■□□□□ 0.24
CACNA1C-228ENST00000492150 TATP17735 454 aaPredicted RBP16.52■□□□□ 0.24
CACNA1C-228ENST00000492150 HOXC9P31274 260 aa16.52■□□□□ 0.24
CACNA1C-228ENST00000492150 FER1L6Q2WGJ9 1857 aa16.52■□□□□ 0.23
CACNA1C-228ENST00000492150 CYP27B1O15528 508 aa16.51■□□□□ 0.23
CACNA1C-228ENST00000492150 RFC4P35249 363 aa16.51■□□□□ 0.23
CACNA1C-228ENST00000492150 RC3H1Q5TC82 1133 aaKnown RBP16.51■□□□□ 0.23
CACNA1C-228ENST00000492150 KDRP35968 1356 aa16.51■□□□□ 0.23
CACNA1C-228ENST00000492150 NKX1-1Q15270 411 aaPredicted RBP16.5■□□□□ 0.23
CACNA1C-228ENST00000492150 COG3Q96JB2 828 aa16.5■□□□□ 0.23
CACNA1C-228ENST00000492150 RTL1A6NKG5 1358 aa16.5■□□□□ 0.23
CACNA1C-228ENST00000492150 CNTNAP4Q9C0A0 1308 aa16.49■□□□□ 0.23
CACNA1C-228ENST00000492150 CA12O43570 354 aa16.49■□□□□ 0.23
CACNA1C-228ENST00000492150 AMPHP49418 695 aa16.49■□□□□ 0.23
CACNA1C-228ENST00000492150 DDR1Q08345 913 aa16.49■□□□□ 0.23
CACNA1C-228ENST00000492150 NBPF6Q5VWK0 638 aa16.49■□□□□ 0.23
CACNA1C-228ENST00000492150 NBPF4Q96M43 638 aa16.49■□□□□ 0.23
CACNA1C-228ENST00000492150 TESK2Q96S53 571 aa16.49■□□□□ 0.23
CACNA1C-228ENST00000492150 MYH14Q7Z406 1995 aaKnown RBP16.49■□□□□ 0.23
CACNA1C-228ENST00000492150 RPS6KA4O75676 772 aa16.48■□□□□ 0.23
CACNA1C-228ENST00000492150 ECE1P42892 770 aa16.48■□□□□ 0.23
CACNA1C-228ENST00000492150 ERFEQ4G0M1 354 aa16.48■□□□□ 0.23
CACNA1C-228ENST00000492150 L3MBTL3Q96JM7 780 aaPredicted RBP16.48■□□□□ 0.23
CACNA1C-228ENST00000492150 NRXN2Q9P2S2 1712 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms