RNA–Protein interactions for RNA: ENST00000491896.1

C3orf49-202, Transcript of chromosome 3 open reading frame 49, humanhuman

TSL 2

Gene C3orf49, Length 736 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf49-202ENST00000491896 POLA2Q14181 598 aa16.03■□□□□ 0.16
C3orf49-202ENST00000491896 GAS2L2Q8NHY3 880 aa16.03■□□□□ 0.16
C3orf49-202ENST00000491896 TMOD3Q9NYL9 352 aa16.03■□□□□ 0.16
C3orf49-202ENST00000491896 SRCAPQ6ZRS2 3230 aa16.02■□□□□ 0.16
C3orf49-202ENST00000491896 ZNF316A6NFI3 1004 aaPredicted RBP16.02■□□□□ 0.16
C3orf49-202ENST00000491896 TAF1LQ8IZX4 1826 aa16.02■□□□□ 0.16
C3orf49-202ENST00000491896 VIRMAQ69YN4 1812 aaKnown RBP16.01■□□□□ 0.15
C3orf49-202ENST00000491896 U2SURPO15042 1029 aaKnown RBP16.01■□□□□ 0.15
C3orf49-202ENST00000491896 RSPH6AQ9H0K4 717 aa16.01■□□□□ 0.15
C3orf49-202ENST00000491896 MAP3K5Q99683 1374 aa16■□□□□ 0.15
C3orf49-202ENST00000491896 HMOX1P09601 288 aa16■□□□□ 0.15
C3orf49-202ENST00000491896 PIGBQ92521 554 aa16■□□□□ 0.15
C3orf49-202ENST00000491896 PNNQ9H307 717 aaKnown RBP16■□□□□ 0.15
C3orf49-202ENST00000491896 MPRIPQ6WCQ1 1025 aa15.99■□□□□ 0.15
C3orf49-202ENST00000491896 PRKRIP1Q9H875 184 aaPredicted RBP15.99■□□□□ 0.15
C3orf49-202ENST00000491896 ANO8Q9HCE9 1232 aaPredicted RBP15.99■□□□□ 0.15
C3orf49-202ENST00000491896 STK32BQ9NY57 414 aa15.99■□□□□ 0.15
C3orf49-202ENST00000491896 CEMIPQ8WUJ3 1361 aa15.99■□□□□ 0.15
C3orf49-202ENST00000491896 SIPA1L3O60292 1781 aaPredicted RBP15.98■□□□□ 0.15
C3orf49-202ENST00000491896 R3HDM1Q15032 1099 aaKnown RBP15.98■□□□□ 0.15
C3orf49-202ENST00000491896 SLC15A2Q16348 729 aa15.98■□□□□ 0.15
C3orf49-202ENST00000491896 C4BP0C0L5 1744 aa15.97■□□□□ 0.15
C3orf49-202ENST00000491896 U2AF1L5P0DN76 240 aaPredicted RBP15.97■□□□□ 0.15
C3orf49-202ENST00000491896 U2AF1Q01081 240 aaKnown RBP eCLIP15.97■□□□□ 0.15
C3orf49-202ENST00000491896 LRRC4BQ9NT99 713 aa15.97■□□□□ 0.15
C3orf49-202ENST00000491896 CCNL1Q9UK58 526 aaPredicted RBP15.97■□□□□ 0.15
C3orf49-202ENST00000491896 UBR2Q8IWV8 1755 aa15.97■□□□□ 0.15
C3orf49-202ENST00000491896 COL5A3P25940 1745 aaPredicted RBP15.97■□□□□ 0.15
C3orf49-202ENST00000491896 COL24A1Q17RW2 1714 aa15.97■□□□□ 0.15
C3orf49-202ENST00000491896 HTATSF1O43719 755 aaKnown RBP15.96■□□□□ 0.15
C3orf49-202ENST00000491896 PRKAR2BP31323 418 aa15.96■□□□□ 0.15
C3orf49-202ENST00000491896 CABP4P57796 275 aa15.96■□□□□ 0.15
C3orf49-202ENST00000491896 CNGB1Q14028 1251 aaPredicted RBP15.96■□□□□ 0.15
C3orf49-202ENST00000491896 MTHFSDQ2M296 383 aaKnown RBP15.96■□□□□ 0.15
C3orf49-202ENST00000491896 AKT1S1Q96B36 256 aa15.96■□□□□ 0.15
C3orf49-202ENST00000491896 TUBGCP6Q96RT7 1819 aa15.96■□□□□ 0.14
C3orf49-202ENST00000491896 GNAT3A8MTJ3 354 aa15.95■□□□□ 0.14
C3orf49-202ENST00000491896 NEFMP07197 916 aa15.95■□□□□ 0.14
C3orf49-202ENST00000491896 SLC52A2Q9HAB3 445 aa15.95■□□□□ 0.14
C3orf49-202ENST00000491896 LOC102724428A0A0B4J2F2 783 aa15.94■□□□□ 0.14
C3orf49-202ENST00000491896 SIK1P57059 783 aa15.94■□□□□ 0.14
C3orf49-202ENST00000491896 SLC16A10Q8TF71 515 aa15.94■□□□□ 0.14
C3orf49-202ENST00000491896 PSDA5PKW4 1024 aaPredicted RBP15.93■□□□□ 0.14
C3orf49-202ENST00000491896 RNMTO43148 476 aaKnown RBP15.93■□□□□ 0.14
C3orf49-202ENST00000491896 FLAD1Q8NFF5 587 aa15.93■□□□□ 0.14
C3orf49-202ENST00000491896 UBR3Q6ZT12 1888 aa15.93■□□□□ 0.14
C3orf49-202ENST00000491896 ATG3Q9NT62 314 aa15.92■□□□□ 0.14
C3orf49-202ENST00000491896 KCPQ6ZWJ8 1503 aa15.92■□□□□ 0.14
C3orf49-202ENST00000491896 TJP1Q07157 1748 aa15.91■□□□□ 0.14
C3orf49-202ENST00000491896 ZNF827Q17R98 1081 aa15.91■□□□□ 0.14
C3orf49-202ENST00000491896 ASAP1Q9ULH1 1129 aa15.91■□□□□ 0.14
C3orf49-202ENST00000491896 VSIG10Q8N0Z9 540 aa15.9■□□□□ 0.14
C3orf49-202ENST00000491896 NFATC2IPQ8NCF5 419 aa15.9■□□□□ 0.14
C3orf49-202ENST00000491896 PLEKHF1Q96S99 279 aa15.9■□□□□ 0.14
C3orf49-202ENST00000491896 MTFR1LQ9H019 292 aa15.9■□□□□ 0.14
C3orf49-202ENST00000491896 SPON1Q9HCB6 807 aa15.9■□□□□ 0.14
C3orf49-202ENST00000491896 CNTNAP4Q9C0A0 1308 aa15.9■□□□□ 0.14
C3orf49-202ENST00000491896 TEFQ10587 303 aa15.89■□□□□ 0.13
C3orf49-202ENST00000491896 PHACTR3Q96KR7 559 aa15.89■□□□□ 0.13
C3orf49-202ENST00000491896 MAPK8IP3Q9UPT6 1336 aa15.89■□□□□ 0.13
C3orf49-202ENST00000491896 DLG5Q8TDM6 1919 aa15.88■□□□□ 0.13
C3orf49-202ENST00000491896 SSFA2P28290 1259 aa15.88■□□□□ 0.13
C3orf49-202ENST00000491896 RC3H1Q5TC82 1133 aaKnown RBP15.88■□□□□ 0.13
C3orf49-202ENST00000491896 RTF1Q92541 710 aaKnown RBP15.88■□□□□ 0.13
C3orf49-202ENST00000491896 TFCP2L1Q9NZI6 479 aa15.88■□□□□ 0.13
C3orf49-202ENST00000491896 PNPLA7Q6ZV29 1317 aa15.88■□□□□ 0.13
C3orf49-202ENST00000491896 ATP6V1AP38606 617 aa15.86■□□□□ 0.13
C3orf49-202ENST00000491896 LMOD3Q0VAK6 560 aa15.86■□□□□ 0.13
C3orf49-202ENST00000491896 WDR43Q15061 677 aaKnown RBP eCLIP15.86■□□□□ 0.13
C3orf49-202ENST00000491896 NFE2L2Q16236 605 aa15.86■□□□□ 0.13
C3orf49-202ENST00000491896 IL17REQ8NFR9 667 aa15.86■□□□□ 0.13
C3orf49-202ENST00000491896 AK7Q96M32 723 aa15.86■□□□□ 0.13
C3orf49-202ENST00000491896 LGR6Q9HBX8 967 aa15.86■□□□□ 0.13
C3orf49-202ENST00000491896 ANP32CO43423 234 aa15.84■□□□□ 0.13
C3orf49-202ENST00000491896 ITPK1Q13572 414 aa15.84■□□□□ 0.13
C3orf49-202ENST00000491896 ZNF790Q6PG37 636 aa15.84■□□□□ 0.13
C3orf49-202ENST00000491896 TTC5Q8N0Z6 440 aa15.84■□□□□ 0.13
C3orf49-202ENST00000491896 LINC00116Q8NCU8 138 aa15.84■□□□□ 0.13
C3orf49-202ENST00000491896 KDM3BQ7LBC6 1761 aa15.84■□□□□ 0.13
C3orf49-202ENST00000491896 SLC4A9Q96Q91 983 aa15.83■□□□□ 0.12
C3orf49-202ENST00000491896 SGIP1Q9BQI5 828 aa15.83■□□□□ 0.12
C3orf49-202ENST00000491896 TEX13AQ9BXU3 409 aaPredicted RBP15.83■□□□□ 0.12
C3orf49-202ENST00000491896 C4AP0C0L4 1744 aa15.82■□□□□ 0.12
C3orf49-202ENST00000491896 PNISRQ8TF01 805 aaKnown RBP15.82■□□□□ 0.12
C3orf49-202ENST00000491896 RUNDC1Q96C34 613 aa15.82■□□□□ 0.12
C3orf49-202ENST00000491896 RBM42Q9BTD8 480 aaKnown RBP15.82■□□□□ 0.12
C3orf49-202ENST00000491896 BABAM1Q9NWV8 329 aa15.82■□□□□ 0.12
C3orf49-202ENST00000491896 LAMB4A4D0S4 1761 aa15.82■□□□□ 0.12
C3orf49-202ENST00000491896 PTGER2P43116 358 aa15.81■□□□□ 0.12
C3orf49-202ENST00000491896 KCNQ4P56696 695 aa15.81■□□□□ 0.12
C3orf49-202ENST00000491896 HEG1Q9ULI3 1381 aa15.81■□□□□ 0.12
C3orf49-202ENST00000491896 MYH14Q7Z406 1995 aaKnown RBP15.8■□□□□ 0.12
C3orf49-202ENST00000491896 GNPATO15228 680 aa15.8■□□□□ 0.12
C3orf49-202ENST00000491896 PTCD1O75127 700 aaKnown RBP15.8■□□□□ 0.12
C3orf49-202ENST00000491896 FMNL2Q96PY5 1086 aa15.8■□□□□ 0.12
C3orf49-202ENST00000491896 RTCBQ9Y3I0 505 aaKnown RBP15.8■□□□□ 0.12
C3orf49-202ENST00000491896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.79■□□□□ 0.12
C3orf49-202ENST00000491896 BTBD11A6QL63 1104 aa15.79■□□□□ 0.12
C3orf49-202ENST00000491896 RPS6KA4O75676 772 aa15.79■□□□□ 0.12
C3orf49-202ENST00000491896 ZBTB7AO95365 584 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms