RNA–Protein interactions for RNA: ENST00000491701.1

CLIP4-211, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5

Gene CLIP4, Length 1,401 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-211ENST00000491701 PRPF38BQ5VTL8 546 aaKnown RBP6.55□□□□□ -1.36
CLIP4-211ENST00000491701 CCDC24Q8N4L8 307 aa6.55□□□□□ -1.36
CLIP4-211ENST00000491701 SENP2Q9HC62 589 aa6.55□□□□□ -1.36
CLIP4-211ENST00000491701 SCAPERQ9BY12 1400 aa6.55□□□□□ -1.36
CLIP4-211ENST00000491701 SIGLEC1Q9BZZ2 1709 aa6.55□□□□□ -1.36
CLIP4-211ENST00000491701 CCDC141Q6ZP82 1450 aa6.54□□□□□ -1.36
CLIP4-211ENST00000491701 SPDYE5A6NIY4 337 aa6.54□□□□□ -1.36
CLIP4-211ENST00000491701 CFAP99D6REC4 459 aa6.54□□□□□ -1.36
CLIP4-211ENST00000491701 RFC5P40937 340 aa6.54□□□□□ -1.36
CLIP4-211ENST00000491701 MMP16P51512 607 aa6.54□□□□□ -1.36
CLIP4-211ENST00000491701 C9orf84Q5VXU9 1444 aa6.54□□□□□ -1.36
CLIP4-211ENST00000491701 FBXO31Q5XUX0 539 aaPredicted RBP6.54□□□□□ -1.36
CLIP4-211ENST00000491701 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.54□□□□□ -1.36
CLIP4-211ENST00000491701 INO80Q9ULG1 1556 aaPredicted RBP6.54□□□□□ -1.36
CLIP4-211ENST00000491701 ACIN1Q9UKV3 1341 aaKnown RBP6.53□□□□□ -1.36
CLIP4-211ENST00000491701 KDM5CP41229 1560 aa6.53□□□□□ -1.36
CLIP4-211ENST00000491701 RTEL1-TNFRSF6BF6WH68 1400 aa6.53□□□□□ -1.36
CLIP4-211ENST00000491701 EIF5BO60841 1220 aaKnown RBP6.53□□□□□ -1.36
CLIP4-211ENST00000491701 HELBQ8NG08 1087 aaPredicted RBP6.53□□□□□ -1.36
CLIP4-211ENST00000491701 PLEKHH2Q8IVE3 1493 aa6.53□□□□□ -1.36
CLIP4-211ENST00000491701 NEO1Q92859 1461 aa6.53□□□□□ -1.36
CLIP4-211ENST00000491701 PLXNC1O60486 1568 aa6.53□□□□□ -1.36
CLIP4-211ENST00000491701 RAPGEF3O95398 923 aa6.52□□□□□ -1.37
CLIP4-211ENST00000491701 TUSC1Q2TAM9 212 aa6.52□□□□□ -1.37
CLIP4-211ENST00000491701 SIN3AQ96ST3 1273 aa6.52□□□□□ -1.37
CLIP4-211ENST00000491701 MROH1Q8NDA8 1641 aa6.52□□□□□ -1.37
CLIP4-211ENST00000491701 ADGRL1O94910 1474 aa6.52□□□□□ -1.37
CLIP4-211ENST00000491701 ZFYVE16Q7Z3T8 1539 aa6.52□□□□□ -1.37
CLIP4-211ENST00000491701 CTHP32929 405 aa6.51□□□□□ -1.37
CLIP4-211ENST00000491701 SKOR1P84550 965 aa6.51□□□□□ -1.37
CLIP4-211ENST00000491701 CTDSPL2Q05D32 466 aa6.51□□□□□ -1.37
CLIP4-211ENST00000491701 AMOTL2Q9Y2J4 779 aa6.51□□□□□ -1.37
CLIP4-211ENST00000491701 PLA2R1Q13018 1463 aa6.51□□□□□ -1.37
CLIP4-211ENST00000491701 MLH3Q9UHC1 1453 aa6.51□□□□□ -1.37
CLIP4-211ENST00000491701 DXOO77932 396 aaKnown RBP6.5□□□□□ -1.37
CLIP4-211ENST00000491701 JUNDP17535 347 aa6.5□□□□□ -1.37
CLIP4-211ENST00000491701 LORP23490 312 aaPredicted RBP6.5□□□□□ -1.37
CLIP4-211ENST00000491701 KIFC2Q96AC6 838 aa6.5□□□□□ -1.37
CLIP4-211ENST00000491701 MPHOSPH9Q99550 1183 aa6.5□□□□□ -1.37
CLIP4-211ENST00000491701 ZNF330Q9Y3S2 320 aaPredicted RBP6.5□□□□□ -1.37
CLIP4-211ENST00000491701 VWDEQ8N2E2 1590 aa6.5□□□□□ -1.37
CLIP4-211ENST00000491701 KDM5DQ9BY66 1539 aa6.5□□□□□ -1.37
CLIP4-211ENST00000491701 POGZQ7Z3K3 1410 aa6.5□□□□□ -1.37
CLIP4-211ENST00000491701 MAGI2Q86UL8 1455 aa6.5□□□□□ -1.37
CLIP4-211ENST00000491701 ANKRD30BQ9BXX2 1392 aa6.5□□□□□ -1.37
CLIP4-211ENST00000491701 ANKRD30AQ9BXX3 1397 aa6.5□□□□□ -1.37
CLIP4-211ENST00000491701 KIF15Q9NS87 1388 aa6.5□□□□□ -1.37
CLIP4-211ENST00000491701 PER1O15534 1290 aaPredicted RBP6.5□□□□□ -1.37
CLIP4-211ENST00000491701 RC3H1Q5TC82 1133 aaKnown RBP6.5□□□□□ -1.37
CLIP4-211ENST00000491701 USP35Q9P2H5 1018 aa6.5□□□□□ -1.37
CLIP4-211ENST00000491701 COG6Q9Y2V7 657 aa6.5□□□□□ -1.37
CLIP4-211ENST00000491701 ABCA6Q8N139 1617 aa6.49□□□□□ -1.37
CLIP4-211ENST00000491701 ANKRD50Q9ULJ7 1429 aa6.49□□□□□ -1.37
CLIP4-211ENST00000491701 YEATS2Q9ULM3 1422 aa6.49□□□□□ -1.37
CLIP4-211ENST00000491701 UNC13BO14795 1591 aa6.49□□□□□ -1.37
CLIP4-211ENST00000491701 DHX29Q7Z478 1369 aaKnown RBP6.49□□□□□ -1.37
CLIP4-211ENST00000491701 BCORL1Q5H9F3 1711 aa6.49□□□□□ -1.37
CLIP4-211ENST00000491701 TSPY4P0CV99 314 aa6.49□□□□□ -1.37
CLIP4-211ENST00000491701 TSPY10P0CW01 314 aa6.49□□□□□ -1.37
CLIP4-211ENST00000491701 KCNA1Q09470 495 aa6.49□□□□□ -1.37
CLIP4-211ENST00000491701 TMEM259Q4ZIN3 620 aa6.49□□□□□ -1.37
CLIP4-211ENST00000491701 PPP2R2DQ66LE6 453 aa6.49□□□□□ -1.37
CLIP4-211ENST00000491701 LRRN4Q8WUT4 740 aa6.49□□□□□ -1.37
CLIP4-211ENST00000491701 NUDT12Q9BQG2 462 aa6.49□□□□□ -1.37
CLIP4-211ENST00000491701 DEPDC5O75140 1603 aa6.49□□□□□ -1.37
CLIP4-211ENST00000491701 ATP7AQ04656 1500 aa6.49□□□□□ -1.37
CLIP4-211ENST00000491701 SPAG9O60271 1321 aaKnown RBP6.48□□□□□ -1.37
CLIP4-211ENST00000491701 HECW2Q9P2P5 1572 aa6.48□□□□□ -1.37
CLIP4-211ENST00000491701 DIP2CQ9Y2E4 1556 aa6.48□□□□□ -1.37
CLIP4-211ENST00000491701 DUOX2Q9NRD8 1548 aa6.48□□□□□ -1.37
CLIP4-211ENST00000491701 BRD1O95696 1058 aa6.48□□□□□ -1.37
CLIP4-211ENST00000491701 USP17L8P0C7I0 530 aa6.48□□□□□ -1.37
CLIP4-211ENST00000491701 GMPRP36959 345 aa6.48□□□□□ -1.37
CLIP4-211ENST00000491701 CCER1Q8TC90 406 aaPredicted RBP6.48□□□□□ -1.37
CLIP4-211ENST00000491701 ZMYM4Q5VZL5 1548 aa6.47□□□□□ -1.37
CLIP4-211ENST00000491701 CCNYL3P0C7X3 344 aa6.47□□□□□ -1.37
CLIP4-211ENST00000491701 SLC16A10Q8TF71 515 aa6.47□□□□□ -1.37
CLIP4-211ENST00000491701 NXF1Q9UBU9 619 aaKnown RBP6.47□□□□□ -1.37
CLIP4-211ENST00000491701 CFAP74Q9C0B2 1584 aa6.47□□□□□ -1.37
CLIP4-211ENST00000491701 CLSPNQ9HAW4 1339 aa6.47□□□□□ -1.37
CLIP4-211ENST00000491701 ALDH1A1P00352 501 aa6.46□□□□□ -1.38
CLIP4-211ENST00000491701 BMP1P13497 986 aa6.46□□□□□ -1.38
CLIP4-211ENST00000491701 WNT7BP56706 349 aa6.46□□□□□ -1.38
CLIP4-211ENST00000491701 PTPRNQ16849 979 aa6.46□□□□□ -1.38
CLIP4-211ENST00000491701 LYPD8Q6UX82 237 aa6.46□□□□□ -1.38
CLIP4-211ENST00000491701 TRIM46Q7Z4K8 759 aa6.46□□□□□ -1.38
CLIP4-211ENST00000491701 SNRKQ9NRH2 765 aa6.46□□□□□ -1.38
CLIP4-211ENST00000491701 MAP10Q9P2G4 905 aa6.46□□□□□ -1.38
CLIP4-211ENST00000491701 IQGAP3Q86VI3 1631 aa6.46□□□□□ -1.38
CLIP4-211ENST00000491701 CFAP65Q6ZU64 1925 aaKnown RBP6.45□□□□□ -1.38
CLIP4-211ENST00000491701 LOC100996750A0A140TA64 210 aa6.45□□□□□ -1.38
CLIP4-211ENST00000491701 VEGFBP49765 207 aa6.45□□□□□ -1.38
CLIP4-211ENST00000491701 DESI1Q6ICB0 168 aa6.45□□□□□ -1.38
CLIP4-211ENST00000491701 KRTAP4-6Q9BYQ5 205 aa6.45□□□□□ -1.38
CLIP4-211ENST00000491701 ZNF518AQ6AHZ1 1483 aa6.45□□□□□ -1.38
CLIP4-211ENST00000491701 E9PCH4 1651 aa6.45□□□□□ -1.38
CLIP4-211ENST00000491701 RNF17Q9BXT8 1623 aaKnown RBP6.44□□□□□ -1.38
CLIP4-211ENST00000491701 A2MP01023 1474 aa6.44□□□□□ -1.38
CLIP4-211ENST00000491701 FAM181BA6NEQ2 426 aa6.44□□□□□ -1.38
CLIP4-211ENST00000491701 NR6A1Q15406 480 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms