RNA–Protein interactions for RNA: ENST00000491592.1

RTN4-215, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-215ENST00000491592 LARGE2Q8N3Y3 721 aa7.61□□□□□ -1.19
RTN4-215ENST00000491592 MEIOBQ8N635 442 aa7.61□□□□□ -1.19
RTN4-215ENST00000491592 RETREG2Q8NC44 543 aa7.61□□□□□ -1.19
RTN4-215ENST00000491592 NOVA2Q9UNW9 492 aaKnown RBP7.61□□□□□ -1.19
RTN4-215ENST00000491592 SOBPA7XYQ1 873 aa7.6□□□□□ -1.19
RTN4-215ENST00000491592 ELOAQ14241 798 aaKnown RBP7.6□□□□□ -1.19
RTN4-215ENST00000491592 TPCN2Q8NHX9 752 aa7.6□□□□□ -1.19
RTN4-215ENST00000491592 STK32AQ8WU08 396 aa7.6□□□□□ -1.19
RTN4-215ENST00000491592 ARHGEF10LQ9HCE6 1279 aa7.6□□□□□ -1.19
RTN4-215ENST00000491592 BMP2P12643 396 aa7.59□□□□□ -1.19
RTN4-215ENST00000491592 SCNN1DP51172 638 aa7.59□□□□□ -1.19
RTN4-215ENST00000491592 DPYDQ12882 1025 aa7.59□□□□□ -1.19
RTN4-215ENST00000491592 C6orf118Q5T5N4 469 aa7.59□□□□□ -1.19
RTN4-215ENST00000491592 CCDC102BQ68D86 513 aa7.59□□□□□ -1.19
RTN4-215ENST00000491592 RAB6BQ9NRW1 208 aa7.59□□□□□ -1.19
RTN4-215ENST00000491592 EIF5BO60841 1220 aaKnown RBP7.58□□□□□ -1.2
RTN4-215ENST00000491592 STAU1O95793 577 aaKnown RBP7.58□□□□□ -1.2
RTN4-215ENST00000491592 GNRH1P01148 92 aa7.58□□□□□ -1.2
RTN4-215ENST00000491592 CSB-PGBD3P0DP91 1061 aa7.58□□□□□ -1.2
RTN4-215ENST00000491592 GDF10P55107 478 aa7.58□□□□□ -1.2
RTN4-215ENST00000491592 ANKMY2Q8IV38 441 aa7.58□□□□□ -1.2
RTN4-215ENST00000491592 LINC00528Q8N1L1 170 aa7.58□□□□□ -1.2
RTN4-215ENST00000491592 KDF1Q8NAX2 398 aaPredicted RBP7.58□□□□□ -1.2
RTN4-215ENST00000491592 AGBL1Q96MI9 1066 aa7.58□□□□□ -1.2
RTN4-215ENST00000491592 ACIN1Q9UKV3 1341 aaKnown RBP7.57□□□□□ -1.2
RTN4-215ENST00000491592 TMEM229AB2RXF0 380 aa7.57□□□□□ -1.2
RTN4-215ENST00000491592 WASLO00401 505 aaPredicted RBP7.57□□□□□ -1.2
RTN4-215ENST00000491592 ZBTB7BO15156 539 aaPredicted RBP7.57□□□□□ -1.2
RTN4-215ENST00000491592 DKK1O94907 266 aa7.57□□□□□ -1.2
RTN4-215ENST00000491592 RELBQ01201 579 aa7.57□□□□□ -1.2
RTN4-215ENST00000491592 TRIM26Q12899 539 aaPredicted RBP7.57□□□□□ -1.2
RTN4-215ENST00000491592 TMEM164Q5U3C3 297 aa7.57□□□□□ -1.2
RTN4-215ENST00000491592 ETNK1Q9HBU6 452 aa7.57□□□□□ -1.2
RTN4-215ENST00000491592 USTQ9Y2C2 406 aa7.57□□□□□ -1.2
RTN4-215ENST00000491592 RBM19Q9Y4C8 960 aaKnown RBP7.57□□□□□ -1.2
RTN4-215ENST00000491592 PPFIA3O75145 1194 aa7.56□□□□□ -1.2
RTN4-215ENST00000491592 SEC13P55735 322 aa7.56□□□□□ -1.2
RTN4-215ENST00000491592 ESCO1Q5FWF5 840 aa7.56□□□□□ -1.2
RTN4-215ENST00000491592 TSEN34Q9BSV6 310 aaKnown RBP7.56□□□□□ -1.2
RTN4-215ENST00000491592 ZNF358Q9NW07 568 aa7.56□□□□□ -1.2
RTN4-215ENST00000491592 PTGIRP43119 386 aa7.55□□□□□ -1.2
RTN4-215ENST00000491592 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.55□□□□□ -1.2
RTN4-215ENST00000491592 FAM200AQ8TCP9 573 aa7.55□□□□□ -1.2
RTN4-215ENST00000491592 SOS2Q07890 1332 aaPredicted RBP7.54□□□□□ -1.2
RTN4-215ENST00000491592 TMEM88BA6NKF7 163 aa7.54□□□□□ -1.2
RTN4-215ENST00000491592 SFI1A8K8P3 1242 aa7.54□□□□□ -1.2
RTN4-215ENST00000491592 IL2RAP01589 272 aa7.54□□□□□ -1.2
RTN4-215ENST00000491592 INHAP05111 366 aa7.54□□□□□ -1.2
RTN4-215ENST00000491592 CLN3Q13286 438 aa7.54□□□□□ -1.2
RTN4-215ENST00000491592 A0A1W2PRU2 124 aa7.53□□□□□ -1.2
RTN4-215ENST00000491592 M0R2N6 131 aa7.53□□□□□ -1.2
RTN4-215ENST00000491592 MEN1O00255 615 aa7.53□□□□□ -1.2
RTN4-215ENST00000491592 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.53□□□□□ -1.2
RTN4-215ENST00000491592 ZNF395Q9H8N7 513 aaPredicted RBP7.53□□□□□ -1.2
RTN4-215ENST00000491592 BACH1O14867 736 aa7.52□□□□□ -1.21
RTN4-215ENST00000491592 SPINT1O43278 529 aa7.52□□□□□ -1.21
RTN4-215ENST00000491592 KCNMA1Q12791 1236 aa7.52□□□□□ -1.21
RTN4-215ENST00000491592 TLR1Q15399 786 aa7.52□□□□□ -1.21
RTN4-215ENST00000491592 SWI5Q1ZZU3 235 aa7.52□□□□□ -1.21
RTN4-215ENST00000491592 TSEN2Q8NCE0 465 aaKnown RBP7.52□□□□□ -1.21
RTN4-215ENST00000491592 CNKSR1Q969H4 720 aa7.52□□□□□ -1.21
RTN4-215ENST00000491592 ESYT1Q9BSJ8 1104 aa7.52□□□□□ -1.21
RTN4-215ENST00000491592 SERTAD1Q9UHV2 236 aa7.52□□□□□ -1.21
RTN4-215ENST00000491592 CARNS1A5YM72 827 aa7.51□□□□□ -1.21
RTN4-215ENST00000491592 XAGE2Q96GT9 111 aa7.51□□□□□ -1.21
RTN4-215ENST00000491592 NLRP3Q96P20 1036 aa7.51□□□□□ -1.21
RTN4-215ENST00000491592 INSM2Q96T92 566 aaPredicted RBP7.51□□□□□ -1.21
RTN4-215ENST00000491592 DNMT3LQ9UJW3 386 aa7.51□□□□□ -1.21
RTN4-215ENST00000491592 HRH3Q9Y5N1 445 aa7.51□□□□□ -1.21
RTN4-215ENST00000491592 TTLL8A6PVC2 850 aa7.5□□□□□ -1.21
RTN4-215ENST00000491592 PDE4CQ08493 712 aa7.5□□□□□ -1.21
RTN4-215ENST00000491592 FAM69CQ0P6D2 419 aa7.5□□□□□ -1.21
RTN4-215ENST00000491592 CLP1Q92989 425 aaKnown RBP7.5□□□□□ -1.21
RTN4-215ENST00000491592 SLC4A9Q96Q91 983 aa7.5□□□□□ -1.21
RTN4-215ENST00000491592 FHDC1Q9C0D6 1143 aaPredicted RBP7.5□□□□□ -1.21
RTN4-215ENST00000491592 POLMQ9NP87 494 aaPredicted RBP7.5□□□□□ -1.21
RTN4-215ENST00000491592 SMTNP53814 917 aa7.49□□□□□ -1.21
RTN4-215ENST00000491592 EPHA4P54764 986 aa7.49□□□□□ -1.21
RTN4-215ENST00000491592 FOXD4L5Q5VV16 416 aaPredicted RBP7.49□□□□□ -1.21
RTN4-215ENST00000491592 A6NJY4 79 aa7.48□□□□□ -1.21
RTN4-215ENST00000491592 LGR5O75473 907 aa7.48□□□□□ -1.21
RTN4-215ENST00000491592 GPC1P35052 558 aa7.48□□□□□ -1.21
RTN4-215ENST00000491592 CTSOP43234 321 aaPredicted RBP7.48□□□□□ -1.21
RTN4-215ENST00000491592 MTFR1Q15390 333 aa7.48□□□□□ -1.21
RTN4-215ENST00000491592 TNS4Q8IZW8 715 aa7.48□□□□□ -1.21
RTN4-215ENST00000491592 TRAIPQ9BWF2 469 aa7.48□□□□□ -1.21
RTN4-215ENST00000491592 RNF225M0QZC1 329 aaPredicted RBP7.47□□□□□ -1.21
RTN4-215ENST00000491592 PRMT3O60678 531 aa7.47□□□□□ -1.21
RTN4-215ENST00000491592 PDIA4P13667 645 aaKnown RBP7.47□□□□□ -1.21
RTN4-215ENST00000491592 FOXK2Q01167 660 aa7.47□□□□□ -1.21
RTN4-215ENST00000491592 PTSQ03393 145 aa7.47□□□□□ -1.21
RTN4-215ENST00000491592 NBPF15Q8N660 670 aa7.47□□□□□ -1.21
RTN4-215ENST00000491592 RNF217Q8TC41 542 aa7.47□□□□□ -1.21
RTN4-215ENST00000491592 HINFPQ9BQA5 517 aa7.47□□□□□ -1.21
RTN4-215ENST00000491592 TSPAN10Q9H1Z9 355 aaPredicted RBP7.47□□□□□ -1.21
RTN4-215ENST00000491592 SCHIP1Q9P0W5 487 aaPredicted RBP7.47□□□□□ -1.21
RTN4-215ENST00000491592 SLAIN2Q9P270 581 aa7.47□□□□□ -1.21
RTN4-215ENST00000491592 USP3Q9Y6I4 520 aa7.47□□□□□ -1.21
RTN4-215ENST00000491592 RNF144AP50876 292 aaPredicted RBP7.46□□□□□ -1.22
RTN4-215ENST00000491592 CENPCQ03188 943 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms