RNA–Protein interactions for RNA: ENST00000491349.5

RNF38-209, Transcript of ring finger protein 38, humanhuman

TSL 5

Gene RNF38, Length 959 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-209ENST00000491349 ADAMTS8Q9UP79 889 aa10.91□□□□□ -0.66
RNF38-209ENST00000491349 PNISRQ8TF01 805 aaKnown RBP10.9□□□□□ -0.66
RNF38-209ENST00000491349 DCAF5Q96JK2 942 aa10.9□□□□□ -0.66
RNF38-209ENST00000491349 HTATSF1O43719 755 aaKnown RBP10.89□□□□□ -0.67
RNF38-209ENST00000491349 POTEIP0CG38 1075 aa10.89□□□□□ -0.67
RNF38-209ENST00000491349 PHKG2P15735 406 aa10.89□□□□□ -0.67
RNF38-209ENST00000491349 CALD1Q05682 793 aaKnown RBP10.89□□□□□ -0.67
RNF38-209ENST00000491349 CCDC125Q86Z20 511 aa10.89□□□□□ -0.67
RNF38-209ENST00000491349 NGEFQ8N5V2 710 aa10.89□□□□□ -0.67
RNF38-209ENST00000491349 SYTL4Q96C24 671 aaPredicted RBP10.89□□□□□ -0.67
RNF38-209ENST00000491349 MAP3K5Q99683 1374 aa10.89□□□□□ -0.67
RNF38-209ENST00000491349 CABP4P57796 275 aa10.88□□□□□ -0.67
RNF38-209ENST00000491349 TEFQ10587 303 aa10.88□□□□□ -0.67
RNF38-209ENST00000491349 NFE2L2Q16236 605 aa10.88□□□□□ -0.67
RNF38-209ENST00000491349 MTHFSDQ2M296 383 aaKnown RBP10.88□□□□□ -0.67
RNF38-209ENST00000491349 CCDC146Q8IYE0 955 aa10.88□□□□□ -0.67
RNF38-209ENST00000491349 VIRMAQ69YN4 1812 aaKnown RBP10.88□□□□□ -0.67
RNF38-209ENST00000491349 SHANK3Q9BYB0 1731 aa10.87□□□□□ -0.67
RNF38-209ENST00000491349 ERVV-2B6SEH9 535 aa10.87□□□□□ -0.67
RNF38-209ENST00000491349 RIPK4P57078 832 aa10.87□□□□□ -0.67
RNF38-209ENST00000491349 MARCH10Q8NA82 808 aaPredicted RBP10.87□□□□□ -0.67
RNF38-209ENST00000491349 TMOD3Q9NYL9 352 aa10.87□□□□□ -0.67
RNF38-209ENST00000491349 DLG5Q8TDM6 1919 aa10.86□□□□□ -0.67
RNF38-209ENST00000491349 BCL9O00512 1426 aa10.86□□□□□ -0.67
RNF38-209ENST00000491349 SCN11AQ9UI33 1791 aa10.86□□□□□ -0.67
RNF38-209ENST00000491349 CYP27B1O15528 508 aa10.86□□□□□ -0.67
RNF38-209ENST00000491349 NKX1-1Q15270 411 aaPredicted RBP10.86□□□□□ -0.67
RNF38-209ENST00000491349 NEUROD2Q15784 382 aa10.86□□□□□ -0.67
RNF38-209ENST00000491349 CCDC184Q52MB2 194 aa10.86□□□□□ -0.67
RNF38-209ENST00000491349 PLEKHF1Q96S99 279 aa10.86□□□□□ -0.67
RNF38-209ENST00000491349 DOT1LQ8TEK3 1739 aa10.86□□□□□ -0.67
RNF38-209ENST00000491349 TMPOP42166 694 aaKnown RBP10.85□□□□□ -0.67
RNF38-209ENST00000491349 BAG6P46379 1132 aa10.85□□□□□ -0.67
RNF38-209ENST00000491349 MPRIPQ6WCQ1 1025 aa10.85□□□□□ -0.67
RNF38-209ENST00000491349 SMARCC1Q92922 1105 aaPredicted RBP10.85□□□□□ -0.67
RNF38-209ENST00000491349 ACSBG1Q96GR2 724 aa10.85□□□□□ -0.67
RNF38-209ENST00000491349 PHACTR3Q96KR7 559 aa10.85□□□□□ -0.67
RNF38-209ENST00000491349 BCL11BQ9C0K0 894 aaPredicted RBP10.85□□□□□ -0.67
RNF38-209ENST00000491349 SBF2Q86WG5 1849 aa10.85□□□□□ -0.67
RNF38-209ENST00000491349 NHSQ6T4R5 1651 aa10.85□□□□□ -0.67
RNF38-209ENST00000491349 APAF1O14727 1248 aa10.84□□□□□ -0.67
RNF38-209ENST00000491349 RNMTO43148 476 aaKnown RBP10.84□□□□□ -0.67
RNF38-209ENST00000491349 TRIM37O94972 964 aa10.84□□□□□ -0.67
RNF38-209ENST00000491349 FAM182BQ5T319 152 aa10.84□□□□□ -0.67
RNF38-209ENST00000491349 TTC5Q8N0Z6 440 aa10.84□□□□□ -0.67
RNF38-209ENST00000491349 ITGB4P16144 1822 aa10.84□□□□□ -0.67
RNF38-209ENST00000491349 PRIM1P49642 420 aaKnown RBP10.83□□□□□ -0.68
RNF38-209ENST00000491349 APBA3O96018 575 aa10.82□□□□□ -0.68
RNF38-209ENST00000491349 SLC52A2Q9HAB3 445 aa10.82□□□□□ -0.68
RNF38-209ENST00000491349 RRP7AQ9Y3A4 280 aaKnown RBP10.82□□□□□ -0.68
RNF38-209ENST00000491349 BTAF1O14981 1849 aa10.81□□□□□ -0.68
RNF38-209ENST00000491349 BTBD11A6QL63 1104 aa10.8□□□□□ -0.68
RNF38-209ENST00000491349 TAF7Q15545 349 aaPredicted RBP10.8□□□□□ -0.68
RNF38-209ENST00000491349 CCDC27Q2M243 656 aa10.8□□□□□ -0.68
RNF38-209ENST00000491349 MCM10Q7L590 875 aa10.8□□□□□ -0.68
RNF38-209ENST00000491349 NFATC2IPQ8NCF5 419 aa10.8□□□□□ -0.68
RNF38-209ENST00000491349 CHMP4AQ9BY43 222 aa10.8□□□□□ -0.68
RNF38-209ENST00000491349 KDM6AO15550 1401 aaPredicted RBP10.79□□□□□ -0.68
RNF38-209ENST00000491349 GNAI1P63096 354 aa10.79□□□□□ -0.68
RNF38-209ENST00000491349 ILDR2Q71H61 639 aa10.79□□□□□ -0.68
RNF38-209ENST00000491349 LGR6Q9HBX8 967 aa10.79□□□□□ -0.68
RNF38-209ENST00000491349 BABAM1Q9NWV8 329 aa10.79□□□□□ -0.68
RNF38-209ENST00000491349 SALL2Q9Y467 1007 aaPredicted RBP10.79□□□□□ -0.68
RNF38-209ENST00000491349 LAS1LQ9Y4W2 734 aaKnown RBP10.79□□□□□ -0.68
RNF38-209ENST00000491349 ADAMTS7Q9UKP4 1686 aa10.79□□□□□ -0.68
RNF38-209ENST00000491349 TOGARAM1Q9Y4F4 1720 aa10.78□□□□□ -0.68
RNF38-209ENST00000491349 RGPD3A6NKT7 1758 aaPredicted RBP10.78□□□□□ -0.68
RNF38-209ENST00000491349 RGPD4Q7Z3J3 1758 aa10.78□□□□□ -0.68
RNF38-209ENST00000491349 PLSCR1O15162 318 aa10.78□□□□□ -0.68
RNF38-209ENST00000491349 HNRNPUQ00839 825 aaKnown RBP eCLIP10.78□□□□□ -0.68
RNF38-209ENST00000491349 IL17REQ8NFR9 667 aa10.78□□□□□ -0.68
RNF38-209ENST00000491349 TSPYL4Q9UJ04 414 aa10.78□□□□□ -0.68
RNF38-209ENST00000491349 MRC1P22897 1456 aa10.78□□□□□ -0.68
RNF38-209ENST00000491349 TNS1Q9HBL0 1735 aaKnown RBP10.78□□□□□ -0.68
RNF38-209ENST00000491349 CEMIPQ8WUJ3 1361 aa10.77□□□□□ -0.68
RNF38-209ENST00000491349 KCNQ2O43526 872 aa10.77□□□□□ -0.69
RNF38-209ENST00000491349 GALR2O43603 387 aaPredicted RBP10.77□□□□□ -0.69
RNF38-209ENST00000491349 DCTN1Q14203 1278 aa10.77□□□□□ -0.69
RNF38-209ENST00000491349 SLC27A3Q5K4L6 730 aa10.77□□□□□ -0.69
RNF38-209ENST00000491349 LHX8Q68G74 356 aa10.77□□□□□ -0.69
RNF38-209ENST00000491349 NPM2Q86SE8 214 aaKnown RBP10.77□□□□□ -0.69
RNF38-209ENST00000491349 WDR63Q8IWG1 891 aa10.77□□□□□ -0.69
RNF38-209ENST00000491349 PIGBQ92521 554 aa10.77□□□□□ -0.69
RNF38-209ENST00000491349 UPF1Q92900 1129 aaKnown RBP eCLIP10.77□□□□□ -0.69
RNF38-209ENST00000491349 FMNL2Q96PY5 1086 aa10.77□□□□□ -0.69
RNF38-209ENST00000491349 TEX13AQ9BXU3 409 aaPredicted RBP10.77□□□□□ -0.69
RNF38-209ENST00000491349 MYH16Q9H6N6 1097 aa10.77□□□□□ -0.69
RNF38-209ENST00000491349 PALLDQ8WX93 1383 aa10.77□□□□□ -0.69
RNF38-209ENST00000491349 SIPA1L3O60292 1781 aaPredicted RBP10.76□□□□□ -0.69
RNF38-209ENST00000491349 NBPF14Q5TI25 921 aa10.76□□□□□ -0.69
RNF38-209ENST00000491349 WWC1Q8IX03 1113 aa10.76□□□□□ -0.69
RNF38-209ENST00000491349 PHF12Q96QT6 1004 aa10.76□□□□□ -0.69
RNF38-209ENST00000491349 IFT57Q9NWB7 429 aa10.76□□□□□ -0.69
RNF38-209ENST00000491349 IL16Q14005 1332 aa10.76□□□□□ -0.69
RNF38-209ENST00000491349 ZNF790Q6PG37 636 aa10.75□□□□□ -0.69
RNF38-209ENST00000491349 CFAP44Q96MT7 982 aa10.75□□□□□ -0.69
RNF38-209ENST00000491349 DCBLD2Q96PD2 775 aa10.75□□□□□ -0.69
RNF38-209ENST00000491349 CCNL1Q9UK58 526 aaPredicted RBP10.75□□□□□ -0.69
RNF38-209ENST00000491349 TRIM35Q9UPQ4 493 aa10.75□□□□□ -0.69
RNF38-209ENST00000491349 SOCS7O14512 581 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms