RNA–Protein interactions for RNA: ENST00000491215.1

NOTCH4-205, Transcript of notch 4, humanhuman

TSL 3

Gene NOTCH4, Length 1,632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4-205ENST00000491215 BTAF1O14981 1849 aa28.47■■■□□ 2.15
NOTCH4-205ENST00000491215 NCBP3Q53F19 620 aaKnown RBP28.46■■■□□ 2.15
NOTCH4-205ENST00000491215 WWC1Q8IX03 1113 aa28.46■■■□□ 2.15
NOTCH4-205ENST00000491215 SIPA1L3O60292 1781 aaPredicted RBP28.45■■■□□ 2.14
NOTCH4-205ENST00000491215 TNS1Q9HBL0 1735 aaKnown RBP28.44■■■□□ 2.14
NOTCH4-205ENST00000491215 SF3B2Q13435 895 aaKnown RBP28.43■■■□□ 2.14
NOTCH4-205ENST00000491215 CALD1Q05682 793 aaKnown RBP28.42■■■□□ 2.14
NOTCH4-205ENST00000491215 BTBD11A6QL63 1104 aa28.41■■■□□ 2.14
NOTCH4-205ENST00000491215 TAF7Q15545 349 aaPredicted RBP28.41■■■□□ 2.14
NOTCH4-205ENST00000491215 APBA3O96018 575 aa28.4■■■□□ 2.14
NOTCH4-205ENST00000491215 LAS1LQ9Y4W2 734 aaKnown RBP28.4■■■□□ 2.14
NOTCH4-205ENST00000491215 ASAP1Q9ULH1 1129 aa28.39■■■□□ 2.13
NOTCH4-205ENST00000491215 CCDC125Q86Z20 511 aa28.38■■■□□ 2.13
NOTCH4-205ENST00000491215 MIS18AQ9NYP9 233 aa28.38■■■□□ 2.13
NOTCH4-205ENST00000491215 SLC39A6Q13433 755 aa28.37■■■□□ 2.13
NOTCH4-205ENST00000491215 ATG3Q9NT62 314 aa28.37■■■□□ 2.13
NOTCH4-205ENST00000491215 TTC5Q8N0Z6 440 aa28.36■■■□□ 2.13
NOTCH4-205ENST00000491215 UPF1Q92900 1129 aaKnown RBP eCLIP28.36■■■□□ 2.13
NOTCH4-205ENST00000491215 SMARCC1Q92922 1105 aaPredicted RBP28.36■■■□□ 2.13
NOTCH4-205ENST00000491215 PAPPAQ13219 1627 aa28.36■■■□□ 2.13
NOTCH4-205ENST00000491215 PALLDQ8WX93 1383 aa28.35■■■□□ 2.13
NOTCH4-205ENST00000491215 WDR63Q8IWG1 891 aa28.35■■■□□ 2.13
NOTCH4-205ENST00000491215 TSPYL4Q9UJ04 414 aa28.35■■■□□ 2.13
NOTCH4-205ENST00000491215 ZNF790Q6PG37 636 aa28.34■■■□□ 2.13
NOTCH4-205ENST00000491215 ZNF521Q96K83 1311 aa28.34■■■□□ 2.13
NOTCH4-205ENST00000491215 GNAI1P63096 354 aa28.33■■■□□ 2.13
NOTCH4-205ENST00000491215 CFAP44Q96MT7 982 aa28.33■■■□□ 2.13
NOTCH4-205ENST00000491215 YTHDC1Q96MU7 727 aaKnown RBP28.33■■■□□ 2.13
NOTCH4-205ENST00000491215 IFT57Q9NWB7 429 aa28.33■■■□□ 2.13
NOTCH4-205ENST00000491215 BAG6P46379 1132 aa28.32■■■□□ 2.12
NOTCH4-205ENST00000491215 KDM3BQ7LBC6 1761 aa28.32■■■□□ 2.12
NOTCH4-205ENST00000491215 PTCD1O75127 700 aaKnown RBP28.32■■■□□ 2.12
NOTCH4-205ENST00000491215 IL16Q14005 1332 aa28.31■■■□□ 2.12
NOTCH4-205ENST00000491215 BABAM1Q9NWV8 329 aa28.31■■■□□ 2.12
NOTCH4-205ENST00000491215 CHL1O00533 1208 aa28.3■■■□□ 2.12
NOTCH4-205ENST00000491215 KCNQ3O43525 872 aa28.3■■■□□ 2.12
NOTCH4-205ENST00000491215 RBM42Q9BTD8 480 aaKnown RBP28.3■■■□□ 2.12
NOTCH4-205ENST00000491215 PLSCR1O15162 318 aa28.29■■■□□ 2.12
NOTCH4-205ENST00000491215 UBR2Q8IWV8 1755 aa28.29■■■□□ 2.12
NOTCH4-205ENST00000491215 LY75O60449 1722 aa28.29■■■□□ 2.12
NOTCH4-205ENST00000491215 RGPD3A6NKT7 1758 aaPredicted RBP28.29■■■□□ 2.12
NOTCH4-205ENST00000491215 RGPD4Q7Z3J3 1758 aa28.29■■■□□ 2.12
NOTCH4-205ENST00000491215 EN1Q05925 392 aaPredicted RBP28.29■■■□□ 2.12
NOTCH4-205ENST00000491215 GOLGA2Q08379 1002 aa28.29■■■□□ 2.12
NOTCH4-205ENST00000491215 DEFB132Q7Z7B7 95 aa28.29■■■□□ 2.12
NOTCH4-205ENST00000491215 MBIPQ9NS73 344 aa28.29■■■□□ 2.12
NOTCH4-205ENST00000491215 ZBED9Q6R2W3 1325 aa28.28■■■□□ 2.12
NOTCH4-205ENST00000491215 ZNF853P0CG23 659 aa28.28■■■□□ 2.12
NOTCH4-205ENST00000491215 KCPQ6ZWJ8 1503 aa28.27■■■□□ 2.12
NOTCH4-205ENST00000491215 LOC102724428A0A0B4J2F2 783 aa28.26■■■□□ 2.11
NOTCH4-205ENST00000491215 SIK1P57059 783 aa28.26■■■□□ 2.11
NOTCH4-205ENST00000491215 ZNF496Q96IT1 587 aaPredicted RBP28.26■■■□□ 2.11
NOTCH4-205ENST00000491215 TSR2Q969E8 191 aaKnown RBP28.25■■■□□ 2.11
NOTCH4-205ENST00000491215 FMNL2Q96PY5 1086 aa28.25■■■□□ 2.11
NOTCH4-205ENST00000491215 SPINK5Q9NQ38 1064 aaPredicted RBP28.25■■■□□ 2.11
NOTCH4-205ENST00000491215 MYH16Q9H6N6 1097 aa28.25■■■□□ 2.11
NOTCH4-205ENST00000491215 CCNL1Q9UK58 526 aaPredicted RBP28.25■■■□□ 2.11
NOTCH4-205ENST00000491215 EZH2Q15910 746 aaKnown RBP28.24■■■□□ 2.11
NOTCH4-205ENST00000491215 TXNRD1Q16881 649 aa28.24■■■□□ 2.11
NOTCH4-205ENST00000491215 ATP6V1AP38606 617 aa28.23■■■□□ 2.11
NOTCH4-205ENST00000491215 KCNQ4P56696 695 aa28.23■■■□□ 2.11
NOTCH4-205ENST00000491215 CAMKK2Q96RR4 588 aa28.23■■■□□ 2.11
NOTCH4-205ENST00000491215 EIF4A1P60842 406 aaKnown RBP28.22■■■□□ 2.11
NOTCH4-205ENST00000491215 E9PSI1 815 aa28.21■■■□□ 2.11
NOTCH4-205ENST00000491215 SLC27A3Q5K4L6 730 aa28.21■■■□□ 2.11
NOTCH4-205ENST00000491215 CDCA7LQ96GN5 454 aa28.21■■■□□ 2.11
NOTCH4-205ENST00000491215 FANCIQ9NVI1 1328 aa28.21■■■□□ 2.11
NOTCH4-205ENST00000491215 HEG1Q9ULI3 1381 aa28.21■■■□□ 2.11
NOTCH4-205ENST00000491215 PROM2Q8N271 834 aa28.2■■■□□ 2.1
NOTCH4-205ENST00000491215 SLC4A9Q96Q91 983 aa28.2■■■□□ 2.1
NOTCH4-205ENST00000491215 VSIG10Q8N0Z9 540 aa28.19■■■□□ 2.1
NOTCH4-205ENST00000491215 ZNF831Q5JPB2 1677 aa28.18■■■□□ 2.1
NOTCH4-205ENST00000491215 SLFN5Q08AF3 891 aa28.18■■■□□ 2.1
NOTCH4-205ENST00000491215 LRRC4BQ9NT99 713 aa28.18■■■□□ 2.1
NOTCH4-205ENST00000491215 SNRPA1P09661 255 aaKnown RBP28.17■■■□□ 2.1
NOTCH4-205ENST00000491215 KRT24Q2M2I5 525 aa28.17■■■□□ 2.1
NOTCH4-205ENST00000491215 TJP1Q07157 1748 aa28.17■■■□□ 2.1
NOTCH4-205ENST00000491215 RREB1Q92766 1687 aa28.17■■■□□ 2.1
NOTCH4-205ENST00000491215 C5P01031 1676 aa28.16■■■□□ 2.1
NOTCH4-205ENST00000491215 ITPK1Q13572 414 aa28.16■■■□□ 2.1
NOTCH4-205ENST00000491215 DNAJC10Q8IXB1 793 aa28.15■■■□□ 2.1
NOTCH4-205ENST00000491215 TAF1LQ8IZX4 1826 aa28.15■■■□□ 2.1
NOTCH4-205ENST00000491215 PRAMEF22A3QJZ6 481 aa28.14■■■□□ 2.1
NOTCH4-205ENST00000491215 GIGYF1O75420 1035 aaPredicted RBP28.14■■■□□ 2.1
NOTCH4-205ENST00000491215 CICQ96RK0 1608 aaPredicted RBP28.14■■■□□ 2.1
NOTCH4-205ENST00000491215 SOCS7O14512 581 aa28.14■■■□□ 2.09
NOTCH4-205ENST00000491215 ELL2O00472 640 aaPredicted RBP28.13■■■□□ 2.09
NOTCH4-205ENST00000491215 TEX13AQ9BXU3 409 aaPredicted RBP28.13■■■□□ 2.09
NOTCH4-205ENST00000491215 COL5A3P25940 1745 aaPredicted RBP28.12■■■□□ 2.09
NOTCH4-205ENST00000491215 NUP188Q5SRE5 1749 aa28.12■■■□□ 2.09
NOTCH4-205ENST00000491215 C8orf58Q8NAV2 365 aa28.12■■■□□ 2.09
NOTCH4-205ENST00000491215 LINC00116Q8NCU8 138 aa28.12■■■□□ 2.09
NOTCH4-205ENST00000491215 EXOSC9Q06265 439 aaKnown RBP28.11■■■□□ 2.09
NOTCH4-205ENST00000491215 DUSP27Q5VZP5 1158 aa28.11■■■□□ 2.09
NOTCH4-205ENST00000491215 LAMB4A4D0S4 1761 aa28.11■■■□□ 2.09
NOTCH4-205ENST00000491215 STARD3NLO95772 234 aa28.1■■■□□ 2.09
NOTCH4-205ENST00000491215 HMGB2P26583 209 aaKnown RBP28.1■■■□□ 2.09
NOTCH4-205ENST00000491215 USP16Q9Y5T5 823 aa28.1■■■□□ 2.09
NOTCH4-205ENST00000491215 TRMT2AQ8IZ69 625 aaKnown RBP28.09■■■□□ 2.09
NOTCH4-205ENST00000491215 C4BP0C0L5 1744 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms