RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 F6X3S4 739 aa17.75■□□□□ 0.43
SMPD4-219ENST00000491128 ZNF428Q96B54 188 aa17.75■□□□□ 0.43
SMPD4-219ENST00000491128 PHLPP1O60346 1717 aa17.75■□□□□ 0.43
SMPD4-219ENST00000491128 C1orf115Q9H7X2 142 aa17.74■□□□□ 0.43
SMPD4-219ENST00000491128 HDGFL1Q5TGJ6 251 aa17.73■□□□□ 0.43
SMPD4-219ENST00000491128 COL16A1Q07092 1604 aaPredicted RBP17.73■□□□□ 0.43
SMPD4-219ENST00000491128 SLC52A2Q9HAB3 445 aa17.73■□□□□ 0.43
SMPD4-219ENST00000491128 CCDC9Q9Y3X0 531 aaKnown RBP17.73■□□□□ 0.43
SMPD4-219ENST00000491128 SLC4A10Q6U841 1118 aa17.72■□□□□ 0.43
SMPD4-219ENST00000491128 C8orf37Q96NL8 207 aa17.72■□□□□ 0.43
SMPD4-219ENST00000491128 PHAXQ9H814 394 aaKnown RBP17.72■□□□□ 0.43
SMPD4-219ENST00000491128 LRRC37A3O60309 1634 aa17.72■□□□□ 0.43
SMPD4-219ENST00000491128 OVOS2A0A0G2JMS6 1433 aa17.72■□□□□ 0.43
SMPD4-219ENST00000491128 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.72■□□□□ 0.43
SMPD4-219ENST00000491128 BRPF1P55201 1214 aaPredicted RBP17.71■□□□□ 0.43
SMPD4-219ENST00000491128 DCAF5Q96JK2 942 aa17.71■□□□□ 0.43
SMPD4-219ENST00000491128 STK31Q9BXU1 1019 aa17.71■□□□□ 0.43
SMPD4-219ENST00000491128 PIP4K2AP48426 406 aaPredicted RBP17.7■□□□□ 0.42
SMPD4-219ENST00000491128 CABP4P57796 275 aa17.7■□□□□ 0.42
SMPD4-219ENST00000491128 TSHZ2Q9NRE2 1034 aa17.7■□□□□ 0.42
SMPD4-219ENST00000491128 CHPF2Q9P2E5 772 aa17.7■□□□□ 0.42
SMPD4-219ENST00000491128 CCDC30Q5VVM6 783 aa17.69■□□□□ 0.42
SMPD4-219ENST00000491128 ZNF790Q6PG37 636 aa17.69■□□□□ 0.42
SMPD4-219ENST00000491128 KDM2BQ8NHM5 1336 aa17.69■□□□□ 0.42
SMPD4-219ENST00000491128 ABCC6O95255 1503 aa17.69■□□□□ 0.42
SMPD4-219ENST00000491128 DDX19BQ9UMR2 479 aa17.69■□□□□ 0.42
SMPD4-219ENST00000491128 PCDH11XQ9BZA7 1347 aa17.69■□□□□ 0.42
SMPD4-219ENST00000491128 PCDH11YQ9BZA8 1340 aa17.69■□□□□ 0.42
SMPD4-219ENST00000491128 HSPA1LP34931 641 aa17.68■□□□□ 0.42
SMPD4-219ENST00000491128 FKBP5Q13451 457 aaPredicted RBP17.68■□□□□ 0.42
SMPD4-219ENST00000491128 ZNF496Q96IT1 587 aaPredicted RBP17.68■□□□□ 0.42
SMPD4-219ENST00000491128 MS4A1P11836 297 aa17.68■□□□□ 0.42
SMPD4-219ENST00000491128 FLIIQ13045 1269 aa17.68■□□□□ 0.42
SMPD4-219ENST00000491128 PROSER3Q2NL68 480 aa17.68■□□□□ 0.42
SMPD4-219ENST00000491128 ARHGAP45Q92619 1136 aa17.68■□□□□ 0.42
SMPD4-219ENST00000491128 GIGYF1O75420 1035 aaPredicted RBP17.67■□□□□ 0.42
SMPD4-219ENST00000491128 NGLY1Q96IV0 654 aa17.67■□□□□ 0.42
SMPD4-219ENST00000491128 API5Q9BZZ5 524 aaKnown RBP17.67■□□□□ 0.42
SMPD4-219ENST00000491128 BABAM1Q9NWV8 329 aa17.67■□□□□ 0.42
SMPD4-219ENST00000491128 ABCC4O15439 1325 aa17.67■□□□□ 0.42
SMPD4-219ENST00000491128 A0A0G2JS52 829 aa17.67■□□□□ 0.42
SMPD4-219ENST00000491128 ZBTB7BO15156 539 aaPredicted RBP17.66■□□□□ 0.42
SMPD4-219ENST00000491128 ZBTB40Q9NUA8 1239 aa17.66■□□□□ 0.42
SMPD4-219ENST00000491128 BCL11AQ9H165 835 aa17.66■□□□□ 0.42
SMPD4-219ENST00000491128 RGS12O14924 1447 aa17.65■□□□□ 0.42
SMPD4-219ENST00000491128 PTCD1O75127 700 aaKnown RBP17.65■□□□□ 0.42
SMPD4-219ENST00000491128 RGS3P49796 1198 aa17.65■□□□□ 0.42
SMPD4-219ENST00000491128 CENPQQ7L2Z9 268 aaPredicted RBP17.65■□□□□ 0.42
SMPD4-219ENST00000491128 TTC5Q8N0Z6 440 aa17.64■□□□□ 0.41
SMPD4-219ENST00000491128 SYTL4Q96C24 671 aaPredicted RBP17.64■□□□□ 0.41
SMPD4-219ENST00000491128 USP16Q9Y5T5 823 aa17.64■□□□□ 0.41
SMPD4-219ENST00000491128 HSP90AB1P08238 724 aaKnown RBP17.63■□□□□ 0.41
SMPD4-219ENST00000491128 MYL6BP14649 208 aa17.63■□□□□ 0.41
SMPD4-219ENST00000491128 AIMP1Q12904 312 aaKnown RBP17.63■□□□□ 0.41
SMPD4-219ENST00000491128 COL22A1Q8NFW1 1626 aaPredicted RBP17.63■□□□□ 0.41
SMPD4-219ENST00000491128 EXOC5O00471 708 aa17.62■□□□□ 0.41
SMPD4-219ENST00000491128 MEIS3Q99687 375 aa17.62■□□□□ 0.41
SMPD4-219ENST00000491128 PTPRCP08575 1304 aa17.61■□□□□ 0.41
SMPD4-219ENST00000491128 SPATA31A1Q5TZJ5 1347 aa17.61■□□□□ 0.41
SMPD4-219ENST00000491128 COL14A1Q05707 1796 aaKnown RBP17.61■□□□□ 0.41
SMPD4-219ENST00000491128 FAM98CQ17RN3 349 aaKnown RBP17.61■□□□□ 0.41
SMPD4-219ENST00000491128 JCADQ9P266 1359 aa17.6■□□□□ 0.41
SMPD4-219ENST00000491128 INTS3Q68E01 1043 aaKnown RBP17.59■□□□□ 0.41
SMPD4-219ENST00000491128 ACSBG1Q96GR2 724 aa17.59■□□□□ 0.41
SMPD4-219ENST00000491128 ASAP1Q9ULH1 1129 aa17.59■□□□□ 0.41
SMPD4-219ENST00000491128 PKD1L3Q7Z443 1732 aa17.59■□□□□ 0.41
SMPD4-219ENST00000491128 PI4KAP2A4QPH2 592 aa17.59■□□□□ 0.41
SMPD4-219ENST00000491128 PI4KAP1Q8N8J0 262 aa17.59■□□□□ 0.41
SMPD4-219ENST00000491128 PIGBQ92521 554 aa17.59■□□□□ 0.41
SMPD4-219ENST00000491128 VIRMAQ69YN4 1812 aaKnown RBP17.59■□□□□ 0.41
SMPD4-219ENST00000491128 HEG1Q9ULI3 1381 aa17.58■□□□□ 0.41
SMPD4-219ENST00000491128 KDM3BQ7LBC6 1761 aa17.58■□□□□ 0.41
SMPD4-219ENST00000491128 NKX1-1Q15270 411 aaPredicted RBP17.58■□□□□ 0.41
SMPD4-219ENST00000491128 UNC5CLQ8IV45 518 aa17.58■□□□□ 0.4
SMPD4-219ENST00000491128 SIRT2Q8IXJ6 389 aa17.58■□□□□ 0.4
SMPD4-219ENST00000491128 RWDD1Q9H446 243 aaPredicted RBP17.58■□□□□ 0.4
SMPD4-219ENST00000491128 TMOD3Q9NYL9 352 aa17.58■□□□□ 0.4
SMPD4-219ENST00000491128 KAT6BQ8WYB5 2073 aa17.57■□□□□ 0.4
SMPD4-219ENST00000491128 ERVV-2B6SEH9 535 aa17.57■□□□□ 0.4
SMPD4-219ENST00000491128 PDIA6Q15084 440 aa17.57■□□□□ 0.4
SMPD4-219ENST00000491128 DDB1Q16531 1140 aa17.57■□□□□ 0.4
SMPD4-219ENST00000491128 FMNL2Q96PY5 1086 aa17.57■□□□□ 0.4
SMPD4-219ENST00000491128 DBF4Q9UBU7 674 aaPredicted RBP17.57■□□□□ 0.4
SMPD4-219ENST00000491128 SPATA31A5Q5VU36 1347 aa17.57■□□□□ 0.4
SMPD4-219ENST00000491128 SPATA31A7Q8IWB4 1347 aa17.57■□□□□ 0.4
SMPD4-219ENST00000491128 MEX3CQ5U5Q3 659 aaKnown RBP17.57■□□□□ 0.4
SMPD4-219ENST00000491128 SCN11AQ9UI33 1791 aa17.57■□□□□ 0.4
SMPD4-219ENST00000491128 DISP2A7MBM2 1401 aa17.57■□□□□ 0.4
SMPD4-219ENST00000491128 LRP6O75581 1613 aa17.56■□□□□ 0.4
SMPD4-219ENST00000491128 PARP4Q9UKK3 1724 aaKnown RBP17.56■□□□□ 0.4
SMPD4-219ENST00000491128 HOXB7P09629 217 aa17.56■□□□□ 0.4
SMPD4-219ENST00000491128 FAM182BQ5T319 152 aa17.56■□□□□ 0.4
SMPD4-219ENST00000491128 SNRPA1P09661 255 aaKnown RBP17.56■□□□□ 0.4
SMPD4-219ENST00000491128 PRIM1P49642 420 aaKnown RBP17.56■□□□□ 0.4
SMPD4-219ENST00000491128 PLCH1Q4KWH8 1693 aa17.56■□□□□ 0.4
SMPD4-219ENST00000491128 USP21Q9UK80 565 aa17.55■□□□□ 0.4
SMPD4-219ENST00000491128 ADAMTS7Q9UKP4 1686 aa17.55■□□□□ 0.4
SMPD4-219ENST00000491128 MARCH10Q8NA82 808 aaPredicted RBP17.55■□□□□ 0.4
SMPD4-219ENST00000491128 RBM42Q9BTD8 480 aaKnown RBP17.55■□□□□ 0.4
SMPD4-219ENST00000491128 PDZRN3Q9UPQ7 1066 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms