RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 GNAI1P63096 354 aa14.25□□□□□ -0.13
VARS2-210ENST00000490699 NKX1-1Q15270 411 aaPredicted RBP14.25□□□□□ -0.13
VARS2-210ENST00000490699 TRIM35Q9UPQ4 493 aa14.25□□□□□ -0.13
VARS2-210ENST00000490699 LAS1LQ9Y4W2 734 aaKnown RBP14.25□□□□□ -0.13
VARS2-210ENST00000490699 VIRMAQ69YN4 1812 aaKnown RBP14.25□□□□□ -0.13
VARS2-210ENST00000490699 SYTL4Q96C24 671 aaPredicted RBP14.24□□□□□ -0.13
VARS2-210ENST00000490699 TMOD3Q9NYL9 352 aa14.24□□□□□ -0.13
VARS2-210ENST00000490699 RGS12O14924 1447 aa14.24□□□□□ -0.13
VARS2-210ENST00000490699 E9PSI1 815 aa14.23□□□□□ -0.13
VARS2-210ENST00000490699 DCTN1Q14203 1278 aa14.23□□□□□ -0.13
VARS2-210ENST00000490699 TAF7Q15545 349 aaPredicted RBP14.23□□□□□ -0.13
VARS2-210ENST00000490699 FAM196AQ6ZSG2 479 aa14.23□□□□□ -0.13
VARS2-210ENST00000490699 MARCH10Q8NA82 808 aaPredicted RBP14.23□□□□□ -0.13
VARS2-210ENST00000490699 IFT57Q9NWB7 429 aa14.23□□□□□ -0.13
VARS2-210ENST00000490699 BABAM1Q9NWV8 329 aa14.23□□□□□ -0.13
VARS2-210ENST00000490699 KDM6AO15550 1401 aaPredicted RBP14.23□□□□□ -0.13
VARS2-210ENST00000490699 CEMIPQ8WUJ3 1361 aa14.22□□□□□ -0.13
VARS2-210ENST00000490699 DOT1LQ8TEK3 1739 aa14.22□□□□□ -0.13
VARS2-210ENST00000490699 TTC5Q8N0Z6 440 aa14.22□□□□□ -0.13
VARS2-210ENST00000490699 IL17REQ8NFR9 667 aa14.22□□□□□ -0.13
VARS2-210ENST00000490699 SLC52A2Q9HAB3 445 aa14.22□□□□□ -0.13
VARS2-210ENST00000490699 TSPYL4Q9UJ04 414 aa14.22□□□□□ -0.13
VARS2-210ENST00000490699 ADAMTS7Q9UKP4 1686 aa14.21□□□□□ -0.13
VARS2-210ENST00000490699 BRWD3Q6RI45 1802 aa14.21□□□□□ -0.13
VARS2-210ENST00000490699 BTBD11A6QL63 1104 aa14.21□□□□□ -0.13
VARS2-210ENST00000490699 CFAP44Q96MT7 982 aa14.21□□□□□ -0.13
VARS2-210ENST00000490699 THUMPD2Q9BTF0 503 aaKnown RBP14.21□□□□□ -0.13
VARS2-210ENST00000490699 LGR6Q9HBX8 967 aa14.21□□□□□ -0.13
VARS2-210ENST00000490699 KAT6BQ8WYB5 2073 aa14.21□□□□□ -0.14
VARS2-210ENST00000490699 MRC1P22897 1456 aa14.2□□□□□ -0.14
VARS2-210ENST00000490699 BCL9O00512 1426 aa14.2□□□□□ -0.14
VARS2-210ENST00000490699 ZNF521Q96K83 1311 aa14.19□□□□□ -0.14
VARS2-210ENST00000490699 SOCS7O14512 581 aa14.19□□□□□ -0.14
VARS2-210ENST00000490699 NFATC2IPQ8NCF5 419 aa14.19□□□□□ -0.14
VARS2-210ENST00000490699 CENPBP07199 599 aaPredicted RBP14.18□□□□□ -0.14
VARS2-210ENST00000490699 PRIM1P49642 420 aaKnown RBP14.18□□□□□ -0.14
VARS2-210ENST00000490699 ACSBG1Q96GR2 724 aa14.18□□□□□ -0.14
VARS2-210ENST00000490699 CHMP4AQ9BY43 222 aa14.18□□□□□ -0.14
VARS2-210ENST00000490699 ITGB4P16144 1822 aa14.18□□□□□ -0.14
VARS2-210ENST00000490699 NHSQ6T4R5 1651 aa14.17□□□□□ -0.14
VARS2-210ENST00000490699 SMARCC1Q92922 1105 aaPredicted RBP14.17□□□□□ -0.14
VARS2-210ENST00000490699 TOGARAM1Q9Y4F4 1720 aa14.17□□□□□ -0.14
VARS2-210ENST00000490699 SIPA1L3O60292 1781 aaPredicted RBP14.17□□□□□ -0.14
VARS2-210ENST00000490699 CHL1O00533 1208 aa14.16□□□□□ -0.14
VARS2-210ENST00000490699 HMGB2P26583 209 aaKnown RBP14.16□□□□□ -0.14
VARS2-210ENST00000490699 SLFN5Q08AF3 891 aa14.16□□□□□ -0.14
VARS2-210ENST00000490699 SF3B2Q13435 895 aaKnown RBP14.15□□□□□ -0.14
VARS2-210ENST00000490699 FAM182BQ5T319 152 aa14.15□□□□□ -0.14
VARS2-210ENST00000490699 BCL11BQ9C0K0 894 aaPredicted RBP14.15□□□□□ -0.14
VARS2-210ENST00000490699 MBIPQ9NS73 344 aa14.15□□□□□ -0.14
VARS2-210ENST00000490699 FANCIQ9NVI1 1328 aa14.15□□□□□ -0.15
VARS2-210ENST00000490699 ZNF790Q6PG37 636 aa14.14□□□□□ -0.15
VARS2-210ENST00000490699 PIGBQ92521 554 aa14.14□□□□□ -0.15
VARS2-210ENST00000490699 TSR2Q969E8 191 aaKnown RBP14.14□□□□□ -0.15
VARS2-210ENST00000490699 FMNL2Q96PY5 1086 aa14.14□□□□□ -0.15
VARS2-210ENST00000490699 KDM3BQ7LBC6 1761 aa14.14□□□□□ -0.15
VARS2-210ENST00000490699 SOS1Q07889 1333 aaPredicted RBP14.14□□□□□ -0.15
VARS2-210ENST00000490699 SBF2Q86WG5 1849 aa14.13□□□□□ -0.15
VARS2-210ENST00000490699 ZNF853P0CG23 659 aa14.13□□□□□ -0.15
VARS2-210ENST00000490699 POLA2Q14181 598 aa14.13□□□□□ -0.15
VARS2-210ENST00000490699 CDCA7LQ96GN5 454 aa14.13□□□□□ -0.15
VARS2-210ENST00000490699 MIS18AQ9NYP9 233 aa14.13□□□□□ -0.15
VARS2-210ENST00000490699 TRIM37O94972 964 aa14.12□□□□□ -0.15
VARS2-210ENST00000490699 CT47B1P0C2W7 299 aaPredicted RBP14.12□□□□□ -0.15
VARS2-210ENST00000490699 PAPPAQ13219 1627 aa14.12□□□□□ -0.15
VARS2-210ENST00000490699 BTAF1O14981 1849 aa14.11□□□□□ -0.15
VARS2-210ENST00000490699 SLC39A6Q13433 755 aa14.11□□□□□ -0.15
VARS2-210ENST00000490699 PIP4P2Q8N4L2 257 aa14.11□□□□□ -0.15
VARS2-210ENST00000490699 PALLDQ8WX93 1383 aa14.1□□□□□ -0.15
VARS2-210ENST00000490699 KCNQ2O43526 872 aa14.1□□□□□ -0.15
VARS2-210ENST00000490699 PTCD1O75127 700 aaKnown RBP14.1□□□□□ -0.15
VARS2-210ENST00000490699 HOXB7P09629 217 aa14.1□□□□□ -0.15
VARS2-210ENST00000490699 DUSP27Q5VZP5 1158 aa14.1□□□□□ -0.15
VARS2-210ENST00000490699 ILDR2Q71H61 639 aa14.1□□□□□ -0.15
VARS2-210ENST00000490699 AKT1S1Q96B36 256 aa14.1□□□□□ -0.15
VARS2-210ENST00000490699 ZNF428Q96B54 188 aa14.1□□□□□ -0.15
VARS2-210ENST00000490699 TEX13AQ9BXU3 409 aaPredicted RBP14.1□□□□□ -0.15
VARS2-210ENST00000490699 HAX1O00165 279 aa14.09□□□□□ -0.15
VARS2-210ENST00000490699 SNRPA1P09661 255 aaKnown RBP14.09□□□□□ -0.15
VARS2-210ENST00000490699 EIF4A1P60842 406 aaKnown RBP14.09□□□□□ -0.15
VARS2-210ENST00000490699 EXOSC9Q06265 439 aaKnown RBP14.09□□□□□ -0.15
VARS2-210ENST00000490699 TWISTNBQ3B726 338 aaPredicted RBP14.09□□□□□ -0.15
VARS2-210ENST00000490699 ATG3Q9NT62 314 aa14.09□□□□□ -0.15
VARS2-210ENST00000490699 ASAP1Q9ULH1 1129 aa14.09□□□□□ -0.15
VARS2-210ENST00000490699 CCDC125Q86Z20 511 aa14.08□□□□□ -0.16
VARS2-210ENST00000490699 TRMT2AQ8IZ69 625 aaKnown RBP14.08□□□□□ -0.16
VARS2-210ENST00000490699 VSIG10Q8N0Z9 540 aa14.08□□□□□ -0.16
VARS2-210ENST00000490699 STK31Q9BXU1 1019 aa14.08□□□□□ -0.16
VARS2-210ENST00000490699 UBR2Q8IWV8 1755 aa14.08□□□□□ -0.16
VARS2-210ENST00000490699 HEG1Q9ULI3 1381 aa14.08□□□□□ -0.16
VARS2-210ENST00000490699 STARD3NLO95772 234 aa14.07□□□□□ -0.16
VARS2-210ENST00000490699 APBA3O96018 575 aa14.07□□□□□ -0.16
VARS2-210ENST00000490699 NPM2Q86SE8 214 aaKnown RBP14.07□□□□□ -0.16
VARS2-210ENST00000490699 ZNF496Q96IT1 587 aaPredicted RBP14.07□□□□□ -0.16
VARS2-210ENST00000490699 LOC102724428A0A0B4J2F2 783 aa14.06□□□□□ -0.16
VARS2-210ENST00000490699 ELL2O00472 640 aaPredicted RBP14.06□□□□□ -0.16
VARS2-210ENST00000490699 ATP6V1AP38606 617 aa14.06□□□□□ -0.16
VARS2-210ENST00000490699 BAG6P46379 1132 aa14.06□□□□□ -0.16
VARS2-210ENST00000490699 SIK1P57059 783 aa14.06□□□□□ -0.16
VARS2-210ENST00000490699 HDGFL1Q5TGJ6 251 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms