RNA–Protein interactions for RNA: ENST00000490077.5

TNXB-206, Transcript of tenascin XB, humanhuman

TSL 1 (best)

Gene TNXB, Length 2,756 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNXB-206ENST00000490077 C3P01024 1663 aa16.36■□□□□ 0.21
TNXB-206ENST00000490077 TRIM6-TRIM34B2RNG4 842 aa16.36■□□□□ 0.21
TNXB-206ENST00000490077 NEK4P51957 841 aa16.36■□□□□ 0.21
TNXB-206ENST00000490077 PLEKHG3A1L390 1219 aa16.35■□□□□ 0.21
TNXB-206ENST00000490077 GPT2Q8TD30 523 aa16.35■□□□□ 0.21
TNXB-206ENST00000490077 RGPD8O14715 1765 aaPredicted RBP16.35■□□□□ 0.21
TNXB-206ENST00000490077 NBPF7P0C2Y1 421 aaPredicted RBP16.34■□□□□ 0.21
TNXB-206ENST00000490077 HDGFP51858 240 aaKnown RBP16.34■□□□□ 0.21
TNXB-206ENST00000490077 USP44Q9H0E7 712 aa16.34■□□□□ 0.21
TNXB-206ENST00000490077 DDX11L8A8MPP1 907 aa16.33■□□□□ 0.21
TNXB-206ENST00000490077 RPAP2Q8IXW5 612 aaPredicted RBP16.33■□□□□ 0.21
TNXB-206ENST00000490077 FER1L4A9Z1Z3 1794 aa16.33■□□□□ 0.21
TNXB-206ENST00000490077 PRKCSHP14314 528 aaPredicted RBP16.33■□□□□ 0.2
TNXB-206ENST00000490077 ABTB2Q8N961 1025 aa16.33■□□□□ 0.2
TNXB-206ENST00000490077 LMBRD1Q9NUN5 540 aa16.33■□□□□ 0.2
TNXB-206ENST00000490077 NAP1L5Q96NT1 182 aaPredicted RBP16.32■□□□□ 0.2
TNXB-206ENST00000490077 MRE11P49959 708 aa16.32■□□□□ 0.2
TNXB-206ENST00000490077 ANO2Q9NQ90 1003 aa16.32■□□□□ 0.2
TNXB-206ENST00000490077 MON2Q7Z3U7 1717 aa16.32■□□□□ 0.2
TNXB-206ENST00000490077 HOXC9P31274 260 aa16.32■□□□□ 0.2
TNXB-206ENST00000490077 RBSNQ9H1K0 784 aa16.32■□□□□ 0.2
TNXB-206ENST00000490077 NBPF6Q5VWK0 638 aa16.31■□□□□ 0.2
TNXB-206ENST00000490077 JARID2Q92833 1246 aaPredicted RBP16.31■□□□□ 0.2
TNXB-206ENST00000490077 NBPF4Q96M43 638 aa16.31■□□□□ 0.2
TNXB-206ENST00000490077 PRIM1P49642 420 aaKnown RBP16.31■□□□□ 0.2
TNXB-206ENST00000490077 PROSER3Q2NL68 480 aa16.31■□□□□ 0.2
TNXB-206ENST00000490077 RNF214Q8ND24 703 aa16.31■□□□□ 0.2
TNXB-206ENST00000490077 PIP4K2AP48426 406 aaPredicted RBP16.3■□□□□ 0.2
TNXB-206ENST00000490077 MPRIPQ6WCQ1 1025 aa16.3■□□□□ 0.2
TNXB-206ENST00000490077 TMX3Q96JJ7 454 aa16.3■□□□□ 0.2
TNXB-206ENST00000490077 GBP4Q96PP9 640 aa16.3■□□□□ 0.2
TNXB-206ENST00000490077 CYP2E1P05181 493 aaPredicted RBP16.3■□□□□ 0.2
TNXB-206ENST00000490077 GNAI2P04899 355 aa16.29■□□□□ 0.2
TNXB-206ENST00000490077 RABEP1Q15276 862 aa16.29■□□□□ 0.2
TNXB-206ENST00000490077 SOS1Q07889 1333 aaPredicted RBP16.29■□□□□ 0.2
TNXB-206ENST00000490077 SSH2Q76I76 1423 aa16.29■□□□□ 0.2
TNXB-206ENST00000490077 TMEM63CQ9P1W3 806 aa16.29■□□□□ 0.2
TNXB-206ENST00000490077 PA2G4Q9UQ80 394 aaKnown RBP16.29■□□□□ 0.2
TNXB-206ENST00000490077 SALL3Q9BXA9 1300 aa16.29■□□□□ 0.2
TNXB-206ENST00000490077 GADD45BO75293 160 aaPredicted RBP16.28■□□□□ 0.2
TNXB-206ENST00000490077 CHPF2Q9P2E5 772 aa16.28■□□□□ 0.2
TNXB-206ENST00000490077 IGSF1Q8N6C5 1336 aa16.28■□□□□ 0.2
TNXB-206ENST00000490077 ERC2O15083 957 aa16.28■□□□□ 0.2
TNXB-206ENST00000490077 CHGBP05060 677 aa16.28■□□□□ 0.2
TNXB-206ENST00000490077 PPP1R42Q7Z4L9 355 aa16.28■□□□□ 0.2
TNXB-206ENST00000490077 SPG7Q9UQ90 795 aa16.28■□□□□ 0.2
TNXB-206ENST00000490077 TECPR2O15040 1411 aa16.28■□□□□ 0.2
TNXB-206ENST00000490077 MX1P20591 662 aa16.27■□□□□ 0.2
TNXB-206ENST00000490077 CHMLP26374 656 aa16.27■□□□□ 0.2
TNXB-206ENST00000490077 ZSCAN23Q3MJ62 389 aa16.27■□□□□ 0.2
TNXB-206ENST00000490077 LMOD2Q6P5Q4 547 aa16.27■□□□□ 0.2
TNXB-206ENST00000490077 ESYT1Q9BSJ8 1104 aa16.27■□□□□ 0.2
TNXB-206ENST00000490077 AKAP12Q02952 1782 aa16.27■□□□□ 0.2
TNXB-206ENST00000490077 PTPRCP08575 1304 aa16.27■□□□□ 0.2
TNXB-206ENST00000490077 GNAT3A8MTJ3 354 aa16.27■□□□□ 0.2
TNXB-206ENST00000490077 RASEFQ8IZ41 740 aa16.27■□□□□ 0.2
TNXB-206ENST00000490077 USP31Q70CQ4 1352 aa16.27■□□□□ 0.19
TNXB-206ENST00000490077 KIAA0232Q92628 1395 aa16.27■□□□□ 0.19
TNXB-206ENST00000490077 ESPNB1AK53 854 aa16.26■□□□□ 0.19
TNXB-206ENST00000490077 STK31Q9BXU1 1019 aa16.26■□□□□ 0.19
TNXB-206ENST00000490077 SYCE3A1L190 88 aa16.26■□□□□ 0.19
TNXB-206ENST00000490077 SURF6O75683 361 aaKnown RBP16.26■□□□□ 0.19
TNXB-206ENST00000490077 TAF7Q15545 349 aaPredicted RBP16.26■□□□□ 0.19
TNXB-206ENST00000490077 HDGFL1Q5TGJ6 251 aa16.26■□□□□ 0.19
TNXB-206ENST00000490077 LRRCC1Q9C099 1032 aa16.26■□□□□ 0.19
TNXB-206ENST00000490077 CIZ1Q9ULV3 898 aaPredicted RBP16.26■□□□□ 0.19
TNXB-206ENST00000490077 PLEKHG1Q9ULL1 1385 aa16.26■□□□□ 0.19
TNXB-206ENST00000490077 PI4KAP2A4QPH2 592 aa16.26■□□□□ 0.19
TNXB-206ENST00000490077 PI4KAP1Q8N8J0 262 aa16.26■□□□□ 0.19
TNXB-206ENST00000490077 KLHDC4Q8TBB5 520 aa16.25■□□□□ 0.19
TNXB-206ENST00000490077 EID1Q9Y6B2 187 aa16.25■□□□□ 0.19
TNXB-206ENST00000490077 ATP8B2P98198 1209 aa16.25■□□□□ 0.19
TNXB-206ENST00000490077 ITSN1Q15811 1721 aa16.25■□□□□ 0.19
TNXB-206ENST00000490077 DDX17Q92841 729 aaKnown RBP16.25■□□□□ 0.19
TNXB-206ENST00000490077 FLT4P35916 1363 aa16.25■□□□□ 0.19
TNXB-206ENST00000490077 NASPP49321 788 aaPredicted RBP16.24■□□□□ 0.19
TNXB-206ENST00000490077 CWF19L2Q2TBE0 894 aaKnown RBP16.24■□□□□ 0.19
TNXB-206ENST00000490077 NDUFB9Q9Y6M9 179 aa16.24■□□□□ 0.19
TNXB-206ENST00000490077 CHMP4BQ9H444 224 aaKnown RBP16.23■□□□□ 0.19
TNXB-206ENST00000490077 SRGAP3O43295 1099 aa16.23■□□□□ 0.19
TNXB-206ENST00000490077 LARGE1O95461 756 aa16.23■□□□□ 0.19
TNXB-206ENST00000490077 TAF6LQ9Y6J9 622 aa16.23■□□□□ 0.19
TNXB-206ENST00000490077 SBNO1A3KN83 1393 aa16.23■□□□□ 0.19
TNXB-206ENST00000490077 CCT4P50991 539 aaKnown RBP16.22■□□□□ 0.19
TNXB-206ENST00000490077 KLHL40Q2TBA0 621 aa16.22■□□□□ 0.19
TNXB-206ENST00000490077 SIRT1Q96EB6 747 aa16.22■□□□□ 0.19
TNXB-206ENST00000490077 TCEANC2Q96MN5 208 aa16.22■□□□□ 0.19
TNXB-206ENST00000490077 ORAI2Q96SN7 254 aa16.22■□□□□ 0.19
TNXB-206ENST00000490077 CWC27Q6UX04 472 aaKnown RBP16.22■□□□□ 0.19
TNXB-206ENST00000490077 NRKQ7Z2Y5 1582 aa16.22■□□□□ 0.19
TNXB-206ENST00000490077 KDRP35968 1356 aa16.22■□□□□ 0.19
TNXB-206ENST00000490077 CLCN1P35523 988 aa16.21■□□□□ 0.19
TNXB-206ENST00000490077 ARHGAP23Q9P227 1491 aa16.21■□□□□ 0.19
TNXB-206ENST00000490077 GOLGB1Q14789 3259 aaKnown RBP16.21■□□□□ 0.19
TNXB-206ENST00000490077 SLIT1O75093 1534 aa16.21■□□□□ 0.19
TNXB-206ENST00000490077 UBTFL1P0CB47 393 aaPredicted RBP16.21■□□□□ 0.19
TNXB-206ENST00000490077 AIMP1Q12904 312 aaKnown RBP16.21■□□□□ 0.19
TNXB-206ENST00000490077 CCDC30Q5VVM6 783 aa16.21■□□□□ 0.19
TNXB-206ENST00000490077 RGPD1P0DJD0 1748 aa16.21■□□□□ 0.19
TNXB-206ENST00000490077 THEMISQ8N1K5 641 aaPredicted RBP16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms