RNA–Protein interactions for RNA: ENST00000489935.1

KCNC4-207, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 1,955 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-207ENST00000489935 MPRIPQ6WCQ1 1025 aa33.1■■■□□ 2.89
KCNC4-207ENST00000489935 FKBP5Q13451 457 aaPredicted RBP33.1■■■□□ 2.89
KCNC4-207ENST00000489935 PXDNQ92626 1479 aa33.1■■■□□ 2.89
KCNC4-207ENST00000489935 EIF4A1P60842 406 aaKnown RBP33.09■■■□□ 2.89
KCNC4-207ENST00000489935 MFAP1P55081 439 aaKnown RBP33.08■■■□□ 2.89
KCNC4-207ENST00000489935 CADPS2Q86UW7 1296 aa33.08■■■□□ 2.89
KCNC4-207ENST00000489935 KCNQ3O43525 872 aa33.07■■■□□ 2.88
KCNC4-207ENST00000489935 HDGFL1Q5TGJ6 251 aa33.07■■■□□ 2.88
KCNC4-207ENST00000489935 ERBB3P21860 1342 aa33.06■■■□□ 2.88
KCNC4-207ENST00000489935 RNMTO43148 476 aaKnown RBP33.06■■■□□ 2.88
KCNC4-207ENST00000489935 TEFQ10587 303 aa33.05■■■□□ 2.88
KCNC4-207ENST00000489935 C1orf141Q5JVX7 400 aa33.05■■■□□ 2.88
KCNC4-207ENST00000489935 BTBD11A6QL63 1104 aa33.03■■■□□ 2.88
KCNC4-207ENST00000489935 C22orf23Q9BZE7 217 aa33.03■■■□□ 2.88
KCNC4-207ENST00000489935 XIRP1Q702N8 1843 aaKnown RBP33.03■■■□□ 2.88
KCNC4-207ENST00000489935 PLEKHM2Q8IWE5 1019 aa33.02■■■□□ 2.88
KCNC4-207ENST00000489935 PHAXQ9H814 394 aaKnown RBP33.02■■■□□ 2.88
KCNC4-207ENST00000489935 NPHP3Q7Z494 1330 aa33.02■■■□□ 2.88
KCNC4-207ENST00000489935 EIF2S2P20042 333 aaKnown RBP33.01■■■□□ 2.87
KCNC4-207ENST00000489935 C16orf71Q8IYS4 520 aaPredicted RBP33.01■■■□□ 2.87
KCNC4-207ENST00000489935 CABLES1Q8TDN4 633 aa33.01■■■□□ 2.87
KCNC4-207ENST00000489935 COL18A1P39060 1754 aa33■■■□□ 2.87
KCNC4-207ENST00000489935 N4BP2Q86UW6 1770 aaPredicted RBP33■■■□□ 2.87
KCNC4-207ENST00000489935 GNAI2P04899 355 aa32.99■■■□□ 2.87
KCNC4-207ENST00000489935 HOXB7P09629 217 aa32.99■■■□□ 2.87
KCNC4-207ENST00000489935 BECN1Q14457 450 aa32.99■■■□□ 2.87
KCNC4-207ENST00000489935 OVOS2A0A0G2JMS6 1433 aa32.98■■■□□ 2.87
KCNC4-207ENST00000489935 TNS3Q68CZ2 1445 aa32.97■■■□□ 2.87
KCNC4-207ENST00000489935 CRYBG1Q9Y4K1 1723 aa32.96■■■□□ 2.87
KCNC4-207ENST00000489935 HMMRO75330 724 aa32.96■■■□□ 2.87
KCNC4-207ENST00000489935 BCL11AQ9H165 835 aa32.96■■■□□ 2.87
KCNC4-207ENST00000489935 PXDNLA1KZ92 1463 aa32.95■■■□□ 2.87
KCNC4-207ENST00000489935 SMARCA5O60264 1052 aaPredicted RBP32.95■■■□□ 2.87
KCNC4-207ENST00000489935 GSPT1P15170 499 aaKnown RBP32.95■■■□□ 2.87
KCNC4-207ENST00000489935 CHPF2Q9P2E5 772 aa32.95■■■□□ 2.87
KCNC4-207ENST00000489935 GNAI3P08754 354 aa32.94■■■□□ 2.86
KCNC4-207ENST00000489935 NLRP2Q9NX02 1062 aa32.94■■■□□ 2.86
KCNC4-207ENST00000489935 SIPA1L3O60292 1781 aaPredicted RBP32.94■■■□□ 2.86
KCNC4-207ENST00000489935 STRCQ7RTU9 1775 aa32.94■■■□□ 2.86
KCNC4-207ENST00000489935 APBB1O00213 710 aa32.94■■■□□ 2.86
KCNC4-207ENST00000489935 RTL5Q5HYW3 569 aaPredicted RBP32.94■■■□□ 2.86
KCNC4-207ENST00000489935 OTUD7AQ8TE49 926 aaPredicted RBP32.94■■■□□ 2.86
KCNC4-207ENST00000489935 SPATA31A3Q5VYP0 1347 aa32.94■■■□□ 2.86
KCNC4-207ENST00000489935 TBC1D2Q9BYX2 928 aa32.92■■■□□ 2.86
KCNC4-207ENST00000489935 ADAMTS7Q9UKP4 1686 aa32.92■■■□□ 2.86
KCNC4-207ENST00000489935 TBC1D9Q6ZT07 1266 aa32.92■■■□□ 2.86
KCNC4-207ENST00000489935 USP44Q9H0E7 712 aa32.92■■■□□ 2.86
KCNC4-207ENST00000489935 CHRNA2Q15822 529 aa32.9■■■□□ 2.86
KCNC4-207ENST00000489935 RAPGEF4Q8WZA2 1011 aa32.9■■■□□ 2.86
KCNC4-207ENST00000489935 TTC22Q5TAA0 569 aa32.9■■■□□ 2.86
KCNC4-207ENST00000489935 LMTK3Q96Q04 1460 aa32.9■■■□□ 2.86
KCNC4-207ENST00000489935 KDM4FA0A1W2PPD8 638 aa32.89■■■□□ 2.86
KCNC4-207ENST00000489935 HEG1Q9ULI3 1381 aa32.89■■■□□ 2.86
KCNC4-207ENST00000489935 ATP8B2P98198 1209 aa32.89■■■□□ 2.85
KCNC4-207ENST00000489935 BRINP3Q76B58 766 aa32.89■■■□□ 2.85
KCNC4-207ENST00000489935 CHMP4AQ9BY43 222 aa32.89■■■□□ 2.85
KCNC4-207ENST00000489935 RBM25P49756 843 aaKnown RBP32.88■■■□□ 2.85
KCNC4-207ENST00000489935 PNMA6EA0A0J9YXQ4 647 aa32.87■■■□□ 2.85
KCNC4-207ENST00000489935 GIGYF1O75420 1035 aaPredicted RBP32.87■■■□□ 2.85
KCNC4-207ENST00000489935 ANXA1P04083 346 aa32.87■■■□□ 2.85
KCNC4-207ENST00000489935 USP35Q9P2H5 1018 aa32.87■■■□□ 2.85
KCNC4-207ENST00000489935 LRRFIP2Q9Y608 721 aaKnown RBP32.87■■■□□ 2.85
KCNC4-207ENST00000489935 TATP17735 454 aaPredicted RBP32.85■■■□□ 2.85
KCNC4-207ENST00000489935 MEGF6O75095 1541 aa32.85■■■□□ 2.85
KCNC4-207ENST00000489935 CDC45O75419 566 aa32.85■■■□□ 2.85
KCNC4-207ENST00000489935 CSB-PGBD3P0DP91 1061 aa32.85■■■□□ 2.85
KCNC4-207ENST00000489935 NFKBIBQ15653 356 aa32.85■■■□□ 2.85
KCNC4-207ENST00000489935 EXOC6BQ9Y2D4 811 aa32.84■■■□□ 2.85
KCNC4-207ENST00000489935 SCN11AQ9UI33 1791 aa32.84■■■□□ 2.85
KCNC4-207ENST00000489935 PRAMEF22A3QJZ6 481 aa32.83■■■□□ 2.85
KCNC4-207ENST00000489935 PI4KAP2A4QPH2 592 aa32.83■■■□□ 2.85
KCNC4-207ENST00000489935 PI4KAP1Q8N8J0 262 aa32.83■■■□□ 2.85
KCNC4-207ENST00000489935 SRCIN1Q9C0H9 1055 aa32.83■■■□□ 2.85
KCNC4-207ENST00000489935 UBTFL1P0CB47 393 aaPredicted RBP32.82■■■□□ 2.84
KCNC4-207ENST00000489935 DBF4Q9UBU7 674 aaPredicted RBP32.82■■■□□ 2.84
KCNC4-207ENST00000489935 KDM6AO15550 1401 aaPredicted RBP32.81■■■□□ 2.84
KCNC4-207ENST00000489935 PHKG2P15735 406 aa32.81■■■□□ 2.84
KCNC4-207ENST00000489935 DNAAF4Q8WXU2 420 aa32.81■■■□□ 2.84
KCNC4-207ENST00000489935 ABCC6O95255 1503 aa32.81■■■□□ 2.84
KCNC4-207ENST00000489935 CPDO75976 1380 aa32.81■■■□□ 2.84
KCNC4-207ENST00000489935 BEND3Q5T5X7 828 aa32.81■■■□□ 2.84
KCNC4-207ENST00000489935 SPG7Q9UQ90 795 aa32.81■■■□□ 2.84
KCNC4-207ENST00000489935 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP32.8■■■□□ 2.84
KCNC4-207ENST00000489935 ZNF335Q9H4Z2 1342 aaPredicted RBP32.8■■■□□ 2.84
KCNC4-207ENST00000489935 ADCY9O60503 1353 aa32.8■■■□□ 2.84
KCNC4-207ENST00000489935 PROSER3Q2NL68 480 aa32.79■■■□□ 2.84
KCNC4-207ENST00000489935 SLC52A2Q9HAB3 445 aa32.78■■■□□ 2.84
KCNC4-207ENST00000489935 SLKQ9H2G2 1235 aaPredicted RBP32.78■■■□□ 2.84
KCNC4-207ENST00000489935 ANTXR1Q9H6X2 564 aa32.78■■■□□ 2.84
KCNC4-207ENST00000489935 SLAIN2Q9P270 581 aa32.77■■■□□ 2.84
KCNC4-207ENST00000489935 SDSP20132 328 aa32.76■■■□□ 2.84
KCNC4-207ENST00000489935 NBPF7P0C2Y1 421 aaPredicted RBP32.76■■■□□ 2.83
KCNC4-207ENST00000489935 SLC39A6Q13433 755 aa32.76■■■□□ 2.83
KCNC4-207ENST00000489935 IBTKQ9P2D0 1353 aaPredicted RBP32.75■■■□□ 2.83
KCNC4-207ENST00000489935 IFNL2Q8IZJ0 200 aa32.75■■■□□ 2.83
KCNC4-207ENST00000489935 NFATC2IPQ8NCF5 419 aa32.75■■■□□ 2.83
KCNC4-207ENST00000489935 KIF2CQ99661 725 aa32.75■■■□□ 2.83
KCNC4-207ENST00000489935 LRRCC1Q9C099 1032 aa32.75■■■□□ 2.83
KCNC4-207ENST00000489935 OSBPL3Q9H4L5 887 aa32.75■■■□□ 2.83
KCNC4-207ENST00000489935 ZNF790Q6PG37 636 aa32.74■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms