RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 MTFR1LQ9H019 292 aa25.54■■□□□ 1.68
EPHB4-207ENST00000489808 LRP5O75197 1615 aa25.54■■□□□ 1.68
EPHB4-207ENST00000489808 PNPLA7Q6ZV29 1317 aa25.54■■□□□ 1.68
EPHB4-207ENST00000489808 GNAT3A8MTJ3 354 aa25.52■■□□□ 1.68
EPHB4-207ENST00000489808 ITPK1Q13572 414 aa25.52■■□□□ 1.68
EPHB4-207ENST00000489808 SLC16A10Q8TF71 515 aa25.52■■□□□ 1.68
EPHB4-207ENST00000489808 SLC4A9Q96Q91 983 aa25.52■■□□□ 1.68
EPHB4-207ENST00000489808 RBM42Q9BTD8 480 aaKnown RBP25.52■■□□□ 1.68
EPHB4-207ENST00000489808 LINC00116Q8NCU8 138 aa25.51■■□□□ 1.67
EPHB4-207ENST00000489808 ZNF316A6NFI3 1004 aaPredicted RBP25.5■■□□□ 1.67
EPHB4-207ENST00000489808 PTGER2P43116 358 aa25.5■■□□□ 1.67
EPHB4-207ENST00000489808 COL23A1Q86Y22 540 aaPredicted RBP25.5■■□□□ 1.67
EPHB4-207ENST00000489808 IL17REQ8NFR9 667 aa25.5■■□□□ 1.67
EPHB4-207ENST00000489808 MYBBP1AQ9BQG0 1328 aaKnown RBP25.49■■□□□ 1.67
EPHB4-207ENST00000489808 CASZ1Q86V15 1759 aa25.49■■□□□ 1.67
EPHB4-207ENST00000489808 MAP3K5Q99683 1374 aa25.48■■□□□ 1.67
EPHB4-207ENST00000489808 PTCD1O75127 700 aaKnown RBP25.48■■□□□ 1.67
EPHB4-207ENST00000489808 AK7Q96M32 723 aa25.48■■□□□ 1.67
EPHB4-207ENST00000489808 PPP1R1BQ9UD71 204 aaPredicted RBP25.48■■□□□ 1.67
EPHB4-207ENST00000489808 FLAD1Q8NFF5 587 aa25.47■■□□□ 1.67
EPHB4-207ENST00000489808 SGIP1Q9BQI5 828 aa25.47■■□□□ 1.67
EPHB4-207ENST00000489808 PRKRIP1Q9H875 184 aaPredicted RBP25.46■■□□□ 1.67
EPHB4-207ENST00000489808 MSH5O43196 834 aa25.45■■□□□ 1.66
EPHB4-207ENST00000489808 SLC39A6Q13433 755 aa25.44■■□□□ 1.66
EPHB4-207ENST00000489808 AMIGO3Q86WK7 504 aa25.44■■□□□ 1.66
EPHB4-207ENST00000489808 PLEKHF1Q96S99 279 aa25.44■■□□□ 1.66
EPHB4-207ENST00000489808 RC3H1Q5TC82 1133 aaKnown RBP25.43■■□□□ 1.66
EPHB4-207ENST00000489808 TEFQ10587 303 aa25.42■■□□□ 1.66
EPHB4-207ENST00000489808 SMIM5Q71RC9 77 aa25.42■■□□□ 1.66
EPHB4-207ENST00000489808 PNNQ9H307 717 aaKnown RBP25.42■■□□□ 1.66
EPHB4-207ENST00000489808 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.41■■□□□ 1.66
EPHB4-207ENST00000489808 NEFMP07197 916 aa25.41■■□□□ 1.66
EPHB4-207ENST00000489808 SSFA2P28290 1259 aa25.41■■□□□ 1.66
EPHB4-207ENST00000489808 MRC1P22897 1456 aa25.4■■□□□ 1.66
EPHB4-207ENST00000489808 GNPATO15228 680 aa25.4■■□□□ 1.66
EPHB4-207ENST00000489808 HTATSF1O43719 755 aaKnown RBP25.4■■□□□ 1.66
EPHB4-207ENST00000489808 PHF14O94880 888 aa25.4■■□□□ 1.66
EPHB4-207ENST00000489808 RTF1Q92541 710 aaKnown RBP25.4■■□□□ 1.66
EPHB4-207ENST00000489808 SCN11AQ9UI33 1791 aa25.4■■□□□ 1.66
EPHB4-207ENST00000489808 CEMIPQ8WUJ3 1361 aa25.4■■□□□ 1.66
EPHB4-207ENST00000489808 C5P01031 1676 aa25.39■■□□□ 1.66
EPHB4-207ENST00000489808 ARXQ96QS3 562 aa25.39■■□□□ 1.66
EPHB4-207ENST00000489808 C4BP0C0L5 1744 aa25.37■■□□□ 1.65
EPHB4-207ENST00000489808 ADAMTS7Q9UKP4 1686 aa25.37■■□□□ 1.65
EPHB4-207ENST00000489808 POLD1P28340 1107 aa25.37■■□□□ 1.65
EPHB4-207ENST00000489808 MCM10Q7L590 875 aa25.37■■□□□ 1.65
EPHB4-207ENST00000489808 RTCBQ9Y3I0 505 aaKnown RBP25.37■■□□□ 1.65
EPHB4-207ENST00000489808 CNTNAP4Q9C0A0 1308 aa25.37■■□□□ 1.65
EPHB4-207ENST00000489808 TAF1LQ8IZX4 1826 aa25.36■■□□□ 1.65
EPHB4-207ENST00000489808 QSER1Q2KHR3 1735 aa25.35■■□□□ 1.65
EPHB4-207ENST00000489808 RPS6KA4O75676 772 aa25.35■■□□□ 1.65
EPHB4-207ENST00000489808 DCTN1Q14203 1278 aa25.35■■□□□ 1.65
EPHB4-207ENST00000489808 TRAPPC3LQ5T215 181 aa25.35■■□□□ 1.65
EPHB4-207ENST00000489808 ZNF790Q6PG37 636 aa25.35■■□□□ 1.65
EPHB4-207ENST00000489808 DNAJC10Q8IXB1 793 aa25.35■■□□□ 1.65
EPHB4-207ENST00000489808 TTC5Q8N0Z6 440 aa25.35■■□□□ 1.65
EPHB4-207ENST00000489808 VSIG10Q8N0Z9 540 aa25.35■■□□□ 1.65
EPHB4-207ENST00000489808 CRKLP46109 303 aaKnown RBP25.34■■□□□ 1.65
EPHB4-207ENST00000489808 NFE2L2Q16236 605 aa25.34■■□□□ 1.65
EPHB4-207ENST00000489808 MSL1Q68DK7 614 aa25.34■■□□□ 1.65
EPHB4-207ENST00000489808 BTBD11A6QL63 1104 aa25.33■■□□□ 1.65
EPHB4-207ENST00000489808 MAPK8IP3Q9UPT6 1336 aa25.33■■□□□ 1.64
EPHB4-207ENST00000489808 INTS5Q6P9B9 1019 aaKnown RBP25.32■■□□□ 1.64
EPHB4-207ENST00000489808 ARHGEF1Q92888 912 aaKnown RBP25.32■■□□□ 1.64
EPHB4-207ENST00000489808 ZNF496Q96IT1 587 aaPredicted RBP25.32■■□□□ 1.64
EPHB4-207ENST00000489808 SYT17Q9BSW7 474 aa25.32■■□□□ 1.64
EPHB4-207ENST00000489808 FHDC1Q9C0D6 1143 aaPredicted RBP25.32■■□□□ 1.64
EPHB4-207ENST00000489808 ZNF831Q5JPB2 1677 aa25.32■■□□□ 1.64
EPHB4-207ENST00000489808 TUBGCP6Q96RT7 1819 aa25.31■■□□□ 1.64
EPHB4-207ENST00000489808 CYP19A1P11511 503 aaPredicted RBP25.31■■□□□ 1.64
EPHB4-207ENST00000489808 ADRA2BP18089 450 aa25.31■■□□□ 1.64
EPHB4-207ENST00000489808 KCNQ3O43525 872 aa25.3■■□□□ 1.64
EPHB4-207ENST00000489808 WDR43Q15061 677 aaKnown RBP eCLIP25.3■■□□□ 1.64
EPHB4-207ENST00000489808 TAF7Q15545 349 aaPredicted RBP25.29■■□□□ 1.64
EPHB4-207ENST00000489808 ADAMTS8Q9UP79 889 aa25.29■■□□□ 1.64
EPHB4-207ENST00000489808 KCPQ6ZWJ8 1503 aa25.28■■□□□ 1.64
EPHB4-207ENST00000489808 CCDC87Q9NVE4 849 aa25.28■■□□□ 1.64
EPHB4-207ENST00000489808 RFC4P35249 363 aa25.27■■□□□ 1.64
EPHB4-207ENST00000489808 FMNL2Q96PY5 1086 aa25.27■■□□□ 1.64
EPHB4-207ENST00000489808 TEX13AQ9BXU3 409 aaPredicted RBP25.27■■□□□ 1.64
EPHB4-207ENST00000489808 STARD3NLO95772 234 aa25.26■■□□□ 1.63
EPHB4-207ENST00000489808 HEG1Q9ULI3 1381 aa25.26■■□□□ 1.63
EPHB4-207ENST00000489808 RIPK4P57078 832 aa25.25■■□□□ 1.63
EPHB4-207ENST00000489808 UBR3Q6ZT12 1888 aa25.25■■□□□ 1.63
EPHB4-207ENST00000489808 TMPOP42166 694 aaKnown RBP25.24■■□□□ 1.63
EPHB4-207ENST00000489808 CCDC146Q8IYE0 955 aa25.24■■□□□ 1.63
EPHB4-207ENST00000489808 RUNDC1Q96C34 613 aa25.24■■□□□ 1.63
EPHB4-207ENST00000489808 NLGN1Q8N2Q7 840 aa25.23■■□□□ 1.63
EPHB4-207ENST00000489808 THUMPD2Q9BTF0 503 aaKnown RBP25.23■■□□□ 1.63
EPHB4-207ENST00000489808 MIS18AQ9NYP9 233 aa25.23■■□□□ 1.63
EPHB4-207ENST00000489808 PNISRQ8TF01 805 aaKnown RBP25.22■■□□□ 1.63
EPHB4-207ENST00000489808 ZBTB1Q9Y2K1 713 aa25.22■■□□□ 1.63
EPHB4-207ENST00000489808 COL5A3P25940 1745 aaPredicted RBP25.21■■□□□ 1.63
EPHB4-207ENST00000489808 SOS1Q07889 1333 aaPredicted RBP25.21■■□□□ 1.63
EPHB4-207ENST00000489808 ANP32CO43423 234 aa25.21■■□□□ 1.63
EPHB4-207ENST00000489808 GYS1P13807 737 aa25.21■■□□□ 1.63
EPHB4-207ENST00000489808 KLHL34Q8N239 644 aa25.21■■□□□ 1.63
EPHB4-207ENST00000489808 COL24A1Q17RW2 1714 aa25.2■■□□□ 1.63
EPHB4-207ENST00000489808 TJP1Q07157 1748 aa25.2■■□□□ 1.62
EPHB4-207ENST00000489808 MYH14Q7Z406 1995 aaKnown RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms