RNA–Protein interactions for RNA: ENST00000489805.5

TFAP2A-216, Transcript of transcription factor AP-2 alpha, humanhuman

TSL 5

Gene TFAP2A, Length 2,739 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFAP2A-216ENST00000489805 LRRFIP2Q9Y608 721 aaKnown RBP24.27■■□□□ 1.48
TFAP2A-216ENST00000489805 LTV1Q96GA3 475 aaPredicted RBP24.26■■□□□ 1.47
TFAP2A-216ENST00000489805 LRSAM1Q6UWE0 723 aa24.26■■□□□ 1.47
TFAP2A-216ENST00000489805 RTF1Q92541 710 aaKnown RBP24.26■■□□□ 1.47
TFAP2A-216ENST00000489805 PTPRCP08575 1304 aa24.26■■□□□ 1.47
TFAP2A-216ENST00000489805 RIMS1Q86UR5 1692 aaKnown RBP24.26■■□□□ 1.47
TFAP2A-216ENST00000489805 GNAI2P04899 355 aa24.26■■□□□ 1.47
TFAP2A-216ENST00000489805 MX1P20591 662 aa24.26■■□□□ 1.47
TFAP2A-216ENST00000489805 IBTKQ9P2D0 1353 aaPredicted RBP24.25■■□□□ 1.47
TFAP2A-216ENST00000489805 HMMRO75330 724 aa24.25■■□□□ 1.47
TFAP2A-216ENST00000489805 PLEKHG5O94827 1062 aa24.25■■□□□ 1.47
TFAP2A-216ENST00000489805 CPA1P15085 419 aa24.25■■□□□ 1.47
TFAP2A-216ENST00000489805 CHMLP26374 656 aa24.25■■□□□ 1.47
TFAP2A-216ENST00000489805 DDX54Q8TDD1 881 aaKnown RBP24.25■■□□□ 1.47
TFAP2A-216ENST00000489805 LRRCC1Q9C099 1032 aa24.25■■□□□ 1.47
TFAP2A-216ENST00000489805 CRB1P82279 1406 aa24.24■■□□□ 1.47
TFAP2A-216ENST00000489805 PDLIM2Q96JY6 352 aa24.24■■□□□ 1.47
TFAP2A-216ENST00000489805 SLC26A8Q96RN1 970 aa24.24■■□□□ 1.47
TFAP2A-216ENST00000489805 KIF24Q5T7B8 1368 aa24.24■■□□□ 1.47
TFAP2A-216ENST00000489805 ROBO2Q9HCK4 1378 aa24.24■■□□□ 1.47
TFAP2A-216ENST00000489805 NOL7Q9UMY1 257 aaKnown RBP24.23■■□□□ 1.47
TFAP2A-216ENST00000489805 RIMBP3CA6NJZ7 1639 aa24.23■■□□□ 1.47
TFAP2A-216ENST00000489805 RIMBP3BA6NNM3 1639 aa24.23■■□□□ 1.47
TFAP2A-216ENST00000489805 RIMBP3Q9UFD9 1639 aa24.23■■□□□ 1.47
TFAP2A-216ENST00000489805 FLIIQ13045 1269 aa24.22■■□□□ 1.47
TFAP2A-216ENST00000489805 BRD1O95696 1058 aa24.22■■□□□ 1.47
TFAP2A-216ENST00000489805 C17orf53Q8N3J3 647 aaPredicted RBP24.22■■□□□ 1.47
TFAP2A-216ENST00000489805 PHAXQ9H814 394 aaKnown RBP24.21■■□□□ 1.47
TFAP2A-216ENST00000489805 DLC1Q96QB1 1528 aa24.21■■□□□ 1.47
TFAP2A-216ENST00000489805 TPM2P07951 284 aa24.21■■□□□ 1.47
TFAP2A-216ENST00000489805 TSC1Q92574 1164 aa24.21■■□□□ 1.47
TFAP2A-216ENST00000489805 EYA1Q99502 592 aa24.21■■□□□ 1.47
TFAP2A-216ENST00000489805 USHBP1Q8N6Y0 703 aa24.2■■□□□ 1.47
TFAP2A-216ENST00000489805 SALL3Q9BXA9 1300 aa24.2■■□□□ 1.46
TFAP2A-216ENST00000489805 USP48Q86UV5 1035 aa24.19■■□□□ 1.46
TFAP2A-216ENST00000489805 GLIPR1L2Q4G1C9 344 aa24.19■■□□□ 1.46
TFAP2A-216ENST00000489805 ANXA1P04083 346 aa24.19■■□□□ 1.46
TFAP2A-216ENST00000489805 STK31Q9BXU1 1019 aa24.19■■□□□ 1.46
TFAP2A-216ENST00000489805 OSBPL3Q9H4L5 887 aa24.19■■□□□ 1.46
TFAP2A-216ENST00000489805 KIAA0232Q92628 1395 aa24.18■■□□□ 1.46
TFAP2A-216ENST00000489805 CCT4P50991 539 aaKnown RBP24.18■■□□□ 1.46
TFAP2A-216ENST00000489805 UQCRHLA0A096LP55 91 aa24.18■■□□□ 1.46
TFAP2A-216ENST00000489805 UQCRHP07919 91 aa24.18■■□□□ 1.46
TFAP2A-216ENST00000489805 PTMAP06454 111 aaKnown RBP24.17■■□□□ 1.46
TFAP2A-216ENST00000489805 ZKSCAN5Q9Y2L8 839 aa24.17■■□□□ 1.46
TFAP2A-216ENST00000489805 EIF2S2P20042 333 aaKnown RBP24.17■■□□□ 1.46
TFAP2A-216ENST00000489805 AMPHP49418 695 aa24.17■■□□□ 1.46
TFAP2A-216ENST00000489805 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.17■■□□□ 1.46
TFAP2A-216ENST00000489805 FAM177BA6PVY3 158 aa24.16■■□□□ 1.46
TFAP2A-216ENST00000489805 CNPY2Q9Y2B0 182 aa24.16■■□□□ 1.46
TFAP2A-216ENST00000489805 SPG7Q9UQ90 795 aa24.16■■□□□ 1.46
TFAP2A-216ENST00000489805 USP44Q9H0E7 712 aa24.15■■□□□ 1.46
TFAP2A-216ENST00000489805 PEAK1Q9H792 1746 aa24.15■■□□□ 1.46
TFAP2A-216ENST00000489805 ATP8B2P98198 1209 aa24.15■■□□□ 1.46
TFAP2A-216ENST00000489805 RASEFQ8IZ41 740 aa24.15■■□□□ 1.46
TFAP2A-216ENST00000489805 PLCB2Q00722 1185 aa24.14■■□□□ 1.46
TFAP2A-216ENST00000489805 CUL4AQ13619 759 aa24.14■■□□□ 1.45
TFAP2A-216ENST00000489805 SETD1AO15047 1707 aaKnown RBP24.14■■□□□ 1.45
TFAP2A-216ENST00000489805 SURF6O75683 361 aaKnown RBP24.13■■□□□ 1.45
TFAP2A-216ENST00000489805 PKNOX2Q96KN3 472 aa24.13■■□□□ 1.45
TFAP2A-216ENST00000489805 USP25Q9UHP3 1055 aa24.13■■□□□ 1.45
TFAP2A-216ENST00000489805 TSPOAP1O95153 1857 aa24.13■■□□□ 1.45
TFAP2A-216ENST00000489805 SRCIN1Q9C0H9 1055 aa24.13■■□□□ 1.45
TFAP2A-216ENST00000489805 TSPY26PQ9H489 355 aa24.13■■□□□ 1.45
TFAP2A-216ENST00000489805 TCHHQ07283 1943 aa24.13■■□□□ 1.45
TFAP2A-216ENST00000489805 REREQ9P2R6 1566 aa24.13■■□□□ 1.45
TFAP2A-216ENST00000489805 NRXN3Q9Y4C0 1643 aa24.13■■□□□ 1.45
TFAP2A-216ENST00000489805 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.12■■□□□ 1.45
TFAP2A-216ENST00000489805 HAP1P54257 671 aaPredicted RBP24.12■■□□□ 1.45
TFAP2A-216ENST00000489805 IL17REQ8NFR9 667 aa24.12■■□□□ 1.45
TFAP2A-216ENST00000489805 MCCP23508 829 aa24.12■■□□□ 1.45
TFAP2A-216ENST00000489805 COL9A3Q14050 684 aaPredicted RBP24.12■■□□□ 1.45
TFAP2A-216ENST00000489805 LARGE1O95461 756 aa24.11■■□□□ 1.45
TFAP2A-216ENST00000489805 LTKP29376 864 aa24.11■■□□□ 1.45
TFAP2A-216ENST00000489805 CWC27Q6UX04 472 aaKnown RBP24.11■■□□□ 1.45
TFAP2A-216ENST00000489805 PPP1R42Q7Z4L9 355 aa24.11■■□□□ 1.45
TFAP2A-216ENST00000489805 ZNF500O60304 480 aaPredicted RBP24.11■■□□□ 1.45
TFAP2A-216ENST00000489805 ESF1Q9H501 851 aaKnown RBP24.11■■□□□ 1.45
TFAP2A-216ENST00000489805 TTC12Q9H892 705 aaPredicted RBP24.11■■□□□ 1.45
TFAP2A-216ENST00000489805 C3P01024 1663 aa24.1■■□□□ 1.45
TFAP2A-216ENST00000489805 NBPF7P0C2Y1 421 aaPredicted RBP24.1■■□□□ 1.45
TFAP2A-216ENST00000489805 CEP170BQ9Y4F5 1589 aaPredicted RBP24.1■■□□□ 1.45
TFAP2A-216ENST00000489805 FIBPO43427 364 aa24.09■■□□□ 1.45
TFAP2A-216ENST00000489805 HCLS1P14317 486 aaPredicted RBP24.09■■□□□ 1.45
TFAP2A-216ENST00000489805 NGDNQ8NEJ9 315 aaKnown RBP24.09■■□□□ 1.45
TFAP2A-216ENST00000489805 UBTFL1P0CB47 393 aaPredicted RBP24.09■■□□□ 1.45
TFAP2A-216ENST00000489805 CEBPAP49715 358 aaPredicted RBP24.09■■□□□ 1.45
TFAP2A-216ENST00000489805 PDCL3Q9H2J4 239 aa24.09■■□□□ 1.45
TFAP2A-216ENST00000489805 CHMP3Q9Y3E7 222 aa24.09■■□□□ 1.45
TFAP2A-216ENST00000489805 SOS1Q07889 1333 aaPredicted RBP24.08■■□□□ 1.45
TFAP2A-216ENST00000489805 MBD3O95983 291 aa24.08■■□□□ 1.44
TFAP2A-216ENST00000489805 MON2Q7Z3U7 1717 aa24.08■■□□□ 1.44
TFAP2A-216ENST00000489805 OVOS2A0A0J9YW53 1432 aa24.08■■□□□ 1.44
TFAP2A-216ENST00000489805 OVOS2Q6IE36 1432 aa24.08■■□□□ 1.44
TFAP2A-216ENST00000489805 AK2P54819 239 aa24.07■■□□□ 1.44
TFAP2A-216ENST00000489805 KCNQ3O43525 872 aa24.07■■□□□ 1.44
TFAP2A-216ENST00000489805 GNAI3P08754 354 aa24.07■■□□□ 1.44
TFAP2A-216ENST00000489805 CCDC30Q5VVM6 783 aa24.07■■□□□ 1.44
TFAP2A-216ENST00000489805 C14orf37Q86TY3 774 aa24.07■■□□□ 1.44
TFAP2A-216ENST00000489805 SRGAP3O43295 1099 aa24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms