RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 UBR2Q8IWV8 1755 aa18.3■□□□□ 0.52
VPS26A-205ENST00000489656 NEFLP07196 543 aa18.3■□□□□ 0.52
VPS26A-205ENST00000489656 RRP1P56182 461 aaKnown RBP18.3■□□□□ 0.52
VPS26A-205ENST00000489656 BARGINQ6ZT62 677 aa18.3■□□□□ 0.52
VPS26A-205ENST00000489656 DCAF5Q96JK2 942 aa18.3■□□□□ 0.52
VPS26A-205ENST00000489656 GTF3C3Q9Y5Q9 886 aa18.3■□□□□ 0.52
VPS26A-205ENST00000489656 THSD7AQ9UPZ6 1657 aa18.3■□□□□ 0.52
VPS26A-205ENST00000489656 RARSP54136 660 aaKnown RBP18.29■□□□□ 0.52
VPS26A-205ENST00000489656 TEFQ10587 303 aa18.29■□□□□ 0.52
VPS26A-205ENST00000489656 USP35Q9P2H5 1018 aa18.29■□□□□ 0.52
VPS26A-205ENST00000489656 TSPYL4Q9UJ04 414 aa18.29■□□□□ 0.52
VPS26A-205ENST00000489656 SOS1Q07889 1333 aaPredicted RBP18.27■□□□□ 0.52
VPS26A-205ENST00000489656 DOT1LQ8TEK3 1739 aa18.27■□□□□ 0.52
VPS26A-205ENST00000489656 GLI3P10071 1580 aa18.27■□□□□ 0.52
VPS26A-205ENST00000489656 C1QBPQ07021 282 aaKnown RBP18.27■□□□□ 0.52
VPS26A-205ENST00000489656 MEX3CQ5U5Q3 659 aaKnown RBP18.27■□□□□ 0.52
VPS26A-205ENST00000489656 KAT6BQ8WYB5 2073 aa18.27■□□□□ 0.51
VPS26A-205ENST00000489656 VAMP4O75379 141 aa18.26■□□□□ 0.51
VPS26A-205ENST00000489656 ALDH1L2Q3SY69 923 aa18.26■□□□□ 0.51
VPS26A-205ENST00000489656 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.26■□□□□ 0.51
VPS26A-205ENST00000489656 USP21Q9UK80 565 aa18.26■□□□□ 0.51
VPS26A-205ENST00000489656 ATRNO75882 1429 aa18.25■□□□□ 0.51
VPS26A-205ENST00000489656 LAMB4A4D0S4 1761 aa18.25■□□□□ 0.51
VPS26A-205ENST00000489656 TWISTNBQ3B726 338 aaPredicted RBP18.25■□□□□ 0.51
VPS26A-205ENST00000489656 ERICH6BQ5W0A0 696 aa18.25■□□□□ 0.51
VPS26A-205ENST00000489656 C8orf58Q8NAV2 365 aa18.25■□□□□ 0.51
VPS26A-205ENST00000489656 SLC52A2Q9HAB3 445 aa18.25■□□□□ 0.51
VPS26A-205ENST00000489656 ERVV-2B6SEH9 535 aa18.24■□□□□ 0.51
VPS26A-205ENST00000489656 BRPF1P55201 1214 aaPredicted RBP18.24■□□□□ 0.51
VPS26A-205ENST00000489656 TSPYL6Q8N831 410 aa18.24■□□□□ 0.51
VPS26A-205ENST00000489656 MIS18AQ9NYP9 233 aa18.24■□□□□ 0.51
VPS26A-205ENST00000489656 C5P01031 1676 aa18.24■□□□□ 0.51
VPS26A-205ENST00000489656 AFF2P51816 1311 aa18.23■□□□□ 0.51
VPS26A-205ENST00000489656 BTBD11A6QL63 1104 aa18.23■□□□□ 0.51
VPS26A-205ENST00000489656 EXOC5O00471 708 aa18.23■□□□□ 0.51
VPS26A-205ENST00000489656 BCAR3O75815 825 aa18.23■□□□□ 0.51
VPS26A-205ENST00000489656 FKBP8Q14318 412 aa18.22■□□□□ 0.51
VPS26A-205ENST00000489656 FBXO41Q8TF61 875 aa18.22■□□□□ 0.51
VPS26A-205ENST00000489656 CCDC9Q9Y3X0 531 aaKnown RBP18.22■□□□□ 0.51
VPS26A-205ENST00000489656 HEG1Q9ULI3 1381 aa18.21■□□□□ 0.51
VPS26A-205ENST00000489656 DDX54Q8TDD1 881 aaKnown RBP18.21■□□□□ 0.51
VPS26A-205ENST00000489656 SSH1Q8WYL5 1049 aa18.21■□□□□ 0.51
VPS26A-205ENST00000489656 N4BP2Q86UW6 1770 aaPredicted RBP18.2■□□□□ 0.5
VPS26A-205ENST00000489656 HOXB7P09629 217 aa18.2■□□□□ 0.5
VPS26A-205ENST00000489656 EIF4A1P60842 406 aaKnown RBP18.2■□□□□ 0.5
VPS26A-205ENST00000489656 DDB1Q16531 1140 aa18.2■□□□□ 0.5
VPS26A-205ENST00000489656 SBF2Q86WG5 1849 aa18.19■□□□□ 0.5
VPS26A-205ENST00000489656 CABP4P57796 275 aa18.19■□□□□ 0.5
VPS26A-205ENST00000489656 KRT24Q2M2I5 525 aa18.19■□□□□ 0.5
VPS26A-205ENST00000489656 NFATC2IPQ8NCF5 419 aa18.19■□□□□ 0.5
VPS26A-205ENST00000489656 SMC4Q9NTJ3 1288 aa18.19■□□□□ 0.5
VPS26A-205ENST00000489656 KIF16BQ96L93 1317 aa18.19■□□□□ 0.5
VPS26A-205ENST00000489656 TRPC5Q9UL62 973 aaPredicted RBP18.18■□□□□ 0.5
VPS26A-205ENST00000489656 BRWD3Q6RI45 1802 aa18.17■□□□□ 0.5
VPS26A-205ENST00000489656 ELL2O00472 640 aaPredicted RBP18.17■□□□□ 0.5
VPS26A-205ENST00000489656 PLIN1O60240 522 aa18.17■□□□□ 0.5
VPS26A-205ENST00000489656 PDE3AQ14432 1141 aa18.17■□□□□ 0.5
VPS26A-205ENST00000489656 ZNF790Q6PG37 636 aa18.17■□□□□ 0.5
VPS26A-205ENST00000489656 MRPL50Q8N5N7 158 aaKnown RBP18.17■□□□□ 0.5
VPS26A-205ENST00000489656 GJD4Q96KN9 370 aaPredicted RBP18.17■□□□□ 0.5
VPS26A-205ENST00000489656 CHMP4AQ9BY43 222 aa18.17■□□□□ 0.5
VPS26A-205ENST00000489656 KCNQ3O43525 872 aa18.16■□□□□ 0.5
VPS26A-205ENST00000489656 IRX6P78412 446 aaPredicted RBP18.16■□□□□ 0.5
VPS26A-205ENST00000489656 FAM98CQ17RN3 349 aaKnown RBP18.16■□□□□ 0.5
VPS26A-205ENST00000489656 BCL2L13Q9BXK5 485 aa18.16■□□□□ 0.5
VPS26A-205ENST00000489656 KCPQ6ZWJ8 1503 aa18.16■□□□□ 0.5
VPS26A-205ENST00000489656 ONECUT3O60422 494 aaPredicted RBP18.15■□□□□ 0.5
VPS26A-205ENST00000489656 CICQ96RK0 1608 aaPredicted RBP18.15■□□□□ 0.5
VPS26A-205ENST00000489656 MS4A1P11836 297 aa18.14■□□□□ 0.49
VPS26A-205ENST00000489656 ZKSCAN2Q63HK3 967 aa18.14■□□□□ 0.49
VPS26A-205ENST00000489656 ARHGAP45Q92619 1136 aa18.14■□□□□ 0.49
VPS26A-205ENST00000489656 NHSQ6T4R5 1651 aa18.14■□□□□ 0.49
VPS26A-205ENST00000489656 BCL9O00512 1426 aa18.14■□□□□ 0.49
VPS26A-205ENST00000489656 IPO8O15397 1037 aaKnown RBP18.13■□□□□ 0.49
VPS26A-205ENST00000489656 MARCH10Q8NA82 808 aaPredicted RBP18.13■□□□□ 0.49
VPS26A-205ENST00000489656 ZNF831Q5JPB2 1677 aa18.12■□□□□ 0.49
VPS26A-205ENST00000489656 GIGYF1O75420 1035 aaPredicted RBP18.12■□□□□ 0.49
VPS26A-205ENST00000489656 CANXP27824 592 aaKnown RBP18.12■□□□□ 0.49
VPS26A-205ENST00000489656 CCDC30Q5VVM6 783 aa18.12■□□□□ 0.49
VPS26A-205ENST00000489656 TTC5Q8N0Z6 440 aa18.12■□□□□ 0.49
VPS26A-205ENST00000489656 FRAT1Q92837 279 aaPredicted RBP18.12■□□□□ 0.49
VPS26A-205ENST00000489656 TMOD3Q9NYL9 352 aa18.12■□□□□ 0.49
VPS26A-205ENST00000489656 SLC39A6Q13433 755 aa18.11■□□□□ 0.49
VPS26A-205ENST00000489656 C20orf194Q5TEA3 1177 aa18.11■□□□□ 0.49
VPS26A-205ENST00000489656 ATF7IPQ6VMQ6 1270 aa18.11■□□□□ 0.49
VPS26A-205ENST00000489656 QTRT2Q9H974 415 aaKnown RBP18.11■□□□□ 0.49
VPS26A-205ENST00000489656 NOB1Q9ULX3 412 aaKnown RBP18.11■□□□□ 0.49
VPS26A-205ENST00000489656 FMNL2Q96PY5 1086 aa18.1■□□□□ 0.49
VPS26A-205ENST00000489656 U3KPZ7 1027 aaPredicted RBP18.1■□□□□ 0.49
VPS26A-205ENST00000489656 BTAF1O14981 1849 aa18.09■□□□□ 0.49
VPS26A-205ENST00000489656 TJP1Q07157 1748 aa18.09■□□□□ 0.49
VPS26A-205ENST00000489656 PTPRCP08575 1304 aa18.09■□□□□ 0.49
VPS26A-205ENST00000489656 TRIM27P14373 513 aa18.09■□□□□ 0.49
VPS26A-205ENST00000489656 HDGFL1Q5TGJ6 251 aa18.09■□□□□ 0.49
VPS26A-205ENST00000489656 ZNF772Q68DY9 489 aaPredicted RBP18.09■□□□□ 0.49
VPS26A-205ENST00000489656 ZNF496Q96IT1 587 aaPredicted RBP18.09■□□□□ 0.49
VPS26A-205ENST00000489656 STK31Q9BXU1 1019 aa18.09■□□□□ 0.49
VPS26A-205ENST00000489656 MYCNP04198 464 aaPredicted RBP18.08■□□□□ 0.48
VPS26A-205ENST00000489656 PIGBQ92521 554 aa18.08■□□□□ 0.48
VPS26A-205ENST00000489656 CRBNQ96SW2 442 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms