RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 TAF7Q15545 349 aaPredicted RBP18.58■□□□□ 0.57
CLDN11-209ENST00000489485 PIGBQ92521 554 aa18.58■□□□□ 0.57
CLDN11-209ENST00000489485 ZNF521Q96K83 1311 aa18.58■□□□□ 0.57
CLDN11-209ENST00000489485 NHSQ6T4R5 1651 aa18.58■□□□□ 0.57
CLDN11-209ENST00000489485 MRC1P22897 1456 aa18.58■□□□□ 0.56
CLDN11-209ENST00000489485 PTF1AQ7RTS3 328 aa18.58■□□□□ 0.56
CLDN11-209ENST00000489485 SIPA1L3O60292 1781 aaPredicted RBP18.58■□□□□ 0.56
CLDN11-209ENST00000489485 BTBD11A6QL63 1104 aa18.57■□□□□ 0.56
CLDN11-209ENST00000489485 WDR63Q8IWG1 891 aa18.57■□□□□ 0.56
CLDN11-209ENST00000489485 MIS18AQ9NYP9 233 aa18.57■□□□□ 0.56
CLDN11-209ENST00000489485 CDCA7LQ96GN5 454 aa18.56■□□□□ 0.56
CLDN11-209ENST00000489485 BCL11BQ9C0K0 894 aaPredicted RBP18.56■□□□□ 0.56
CLDN11-209ENST00000489485 GOLGA2Q08379 1002 aa18.55■□□□□ 0.56
CLDN11-209ENST00000489485 CFAP44Q96MT7 982 aa18.55■□□□□ 0.56
CLDN11-209ENST00000489485 BTAF1O14981 1849 aa18.55■□□□□ 0.56
CLDN11-209ENST00000489485 GNAI1P63096 354 aa18.54■□□□□ 0.56
CLDN11-209ENST00000489485 SLC39A6Q13433 755 aa18.54■□□□□ 0.56
CLDN11-209ENST00000489485 TSPYL4Q9UJ04 414 aa18.54■□□□□ 0.56
CLDN11-209ENST00000489485 IFT57Q9NWB7 429 aa18.54■□□□□ 0.56
CLDN11-209ENST00000489485 IL16Q14005 1332 aa18.53■□□□□ 0.56
CLDN11-209ENST00000489485 ILDR2Q71H61 639 aa18.53■□□□□ 0.56
CLDN11-209ENST00000489485 TTC5Q8N0Z6 440 aa18.53■□□□□ 0.56
CLDN11-209ENST00000489485 SPINK5Q9NQ38 1064 aaPredicted RBP18.53■□□□□ 0.56
CLDN11-209ENST00000489485 ASAP1Q9ULH1 1129 aa18.53■□□□□ 0.56
CLDN11-209ENST00000489485 ZNF790Q6PG37 636 aa18.52■□□□□ 0.56
CLDN11-209ENST00000489485 CHL1O00533 1208 aa18.52■□□□□ 0.55
CLDN11-209ENST00000489485 ATG3Q9NT62 314 aa18.52■□□□□ 0.55
CLDN11-209ENST00000489485 ZNF853P0CG23 659 aa18.51■□□□□ 0.55
CLDN11-209ENST00000489485 TSR2Q969E8 191 aaKnown RBP18.51■□□□□ 0.55
CLDN11-209ENST00000489485 MBIPQ9NS73 344 aa18.51■□□□□ 0.55
CLDN11-209ENST00000489485 KCNQ3O43525 872 aa18.5■□□□□ 0.55
CLDN11-209ENST00000489485 BABAM1Q9NWV8 329 aa18.5■□□□□ 0.55
CLDN11-209ENST00000489485 KDM3BQ7LBC6 1761 aa18.5■□□□□ 0.55
CLDN11-209ENST00000489485 E9PSI1 815 aa18.5■□□□□ 0.55
CLDN11-209ENST00000489485 PTCD1O75127 700 aaKnown RBP18.5■□□□□ 0.55
CLDN11-209ENST00000489485 APBA3O96018 575 aa18.5■□□□□ 0.55
CLDN11-209ENST00000489485 MYH16Q9H6N6 1097 aa18.5■□□□□ 0.55
CLDN11-209ENST00000489485 CENPBP07199 599 aaPredicted RBP18.49■□□□□ 0.55
CLDN11-209ENST00000489485 SLFN5Q08AF3 891 aa18.49■□□□□ 0.55
CLDN11-209ENST00000489485 SF3B2Q13435 895 aaKnown RBP18.49■□□□□ 0.55
CLDN11-209ENST00000489485 SMARCC1Q92922 1105 aaPredicted RBP18.49■□□□□ 0.55
CLDN11-209ENST00000489485 PAPPAQ13219 1627 aa18.49■□□□□ 0.55
CLDN11-209ENST00000489485 TNS1Q9HBL0 1735 aaKnown RBP18.49■□□□□ 0.55
CLDN11-209ENST00000489485 RBM42Q9BTD8 480 aaKnown RBP18.48■□□□□ 0.55
CLDN11-209ENST00000489485 PALLDQ8WX93 1383 aa18.48■□□□□ 0.55
CLDN11-209ENST00000489485 FANCIQ9NVI1 1328 aa18.47■□□□□ 0.55
CLDN11-209ENST00000489485 ZNF496Q96IT1 587 aaPredicted RBP18.47■□□□□ 0.55
CLDN11-209ENST00000489485 FMNL2Q96PY5 1086 aa18.46■□□□□ 0.55
CLDN11-209ENST00000489485 UBR2Q8IWV8 1755 aa18.46■□□□□ 0.55
CLDN11-209ENST00000489485 EIF4A1P60842 406 aaKnown RBP18.46■□□□□ 0.54
CLDN11-209ENST00000489485 DUSP27Q5VZP5 1158 aa18.46■□□□□ 0.54
CLDN11-209ENST00000489485 TRMT2AQ8IZ69 625 aaKnown RBP18.45■□□□□ 0.54
CLDN11-209ENST00000489485 KCPQ6ZWJ8 1503 aa18.44■□□□□ 0.54
CLDN11-209ENST00000489485 KRT24Q2M2I5 525 aa18.44■□□□□ 0.54
CLDN11-209ENST00000489485 LOC102724428A0A0B4J2F2 783 aa18.43■□□□□ 0.54
CLDN11-209ENST00000489485 ELL2O00472 640 aaPredicted RBP18.43■□□□□ 0.54
CLDN11-209ENST00000489485 SIK1P57059 783 aa18.43■□□□□ 0.54
CLDN11-209ENST00000489485 CCDC125Q86Z20 511 aa18.43■□□□□ 0.54
CLDN11-209ENST00000489485 LY75O60449 1722 aa18.43■□□□□ 0.54
CLDN11-209ENST00000489485 PLSCR1O15162 318 aa18.43■□□□□ 0.54
CLDN11-209ENST00000489485 ATP6V1AP38606 617 aa18.43■□□□□ 0.54
CLDN11-209ENST00000489485 BAG6P46379 1132 aa18.42■□□□□ 0.54
CLDN11-209ENST00000489485 KCNQ4P56696 695 aa18.42■□□□□ 0.54
CLDN11-209ENST00000489485 EXOSC9Q06265 439 aaKnown RBP18.42■□□□□ 0.54
CLDN11-209ENST00000489485 HEG1Q9ULI3 1381 aa18.42■□□□□ 0.54
CLDN11-209ENST00000489485 EN1Q05925 392 aaPredicted RBP18.41■□□□□ 0.54
CLDN11-209ENST00000489485 UPF1Q92900 1129 aaKnown RBP eCLIP18.41■□□□□ 0.54
CLDN11-209ENST00000489485 CCNL1Q9UK58 526 aaPredicted RBP18.41■□□□□ 0.54
CLDN11-209ENST00000489485 SNRPA1P09661 255 aaKnown RBP18.41■□□□□ 0.54
CLDN11-209ENST00000489485 DEFB132Q7Z7B7 95 aa18.41■□□□□ 0.54
CLDN11-209ENST00000489485 C8orf58Q8NAV2 365 aa18.41■□□□□ 0.54
CLDN11-209ENST00000489485 SLC4A9Q96Q91 983 aa18.41■□□□□ 0.54
CLDN11-209ENST00000489485 PRAMEF22A3QJZ6 481 aa18.4■□□□□ 0.54
CLDN11-209ENST00000489485 GIGYF1O75420 1035 aaPredicted RBP18.4■□□□□ 0.54
CLDN11-209ENST00000489485 TXNRD1Q16881 649 aa18.4■□□□□ 0.54
CLDN11-209ENST00000489485 VSIG10Q8N0Z9 540 aa18.39■□□□□ 0.54
CLDN11-209ENST00000489485 TSPYL6Q8N831 410 aa18.39■□□□□ 0.54
CLDN11-209ENST00000489485 TWISTNBQ3B726 338 aaPredicted RBP18.39■□□□□ 0.53
CLDN11-209ENST00000489485 C5P01031 1676 aa18.38■□□□□ 0.53
CLDN11-209ENST00000489485 EZH2Q15910 746 aaKnown RBP18.38■□□□□ 0.53
CLDN11-209ENST00000489485 DNAJC10Q8IXB1 793 aa18.38■□□□□ 0.53
CLDN11-209ENST00000489485 PROM2Q8N271 834 aa18.38■□□□□ 0.53
CLDN11-209ENST00000489485 RGPD3A6NKT7 1758 aaPredicted RBP18.38■□□□□ 0.53
CLDN11-209ENST00000489485 RGPD4Q7Z3J3 1758 aa18.38■□□□□ 0.53
CLDN11-209ENST00000489485 EIF2S2P20042 333 aaKnown RBP18.37■□□□□ 0.53
CLDN11-209ENST00000489485 SLC27A3Q5K4L6 730 aa18.37■□□□□ 0.53
CLDN11-209ENST00000489485 TEX13AQ9BXU3 409 aaPredicted RBP18.37■□□□□ 0.53
CLDN11-209ENST00000489485 USP16Q9Y5T5 823 aa18.37■□□□□ 0.53
CLDN11-209ENST00000489485 ITPK1Q13572 414 aa18.37■□□□□ 0.53
CLDN11-209ENST00000489485 NECTIN2Q92692 538 aa18.37■□□□□ 0.53
CLDN11-209ENST00000489485 CAMKK2Q96RR4 588 aa18.37■□□□□ 0.53
CLDN11-209ENST00000489485 LRRC4BQ9NT99 713 aa18.37■□□□□ 0.53
CLDN11-209ENST00000489485 TJP1Q07157 1748 aa18.37■□□□□ 0.53
CLDN11-209ENST00000489485 ZNF831Q5JPB2 1677 aa18.36■□□□□ 0.53
CLDN11-209ENST00000489485 STARD3NLO95772 234 aa18.35■□□□□ 0.53
CLDN11-209ENST00000489485 TAF1LQ8IZX4 1826 aa18.35■□□□□ 0.53
CLDN11-209ENST00000489485 HOXB7P09629 217 aa18.35■□□□□ 0.53
CLDN11-209ENST00000489485 LAMB4A4D0S4 1761 aa18.34■□□□□ 0.53
CLDN11-209ENST00000489485 VAMP4O75379 141 aa18.34■□□□□ 0.53
CLDN11-209ENST00000489485 HDGFL1Q5TGJ6 251 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms