RNA–Protein interactions for RNA: ENST00000489443.2

LMX1A-204, Transcript of LIM homeobox transcription factor 1 alpha, humanhuman

TSL 1 (best)

Gene LMX1A, Length 1,255 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1A-204ENST00000489443 RBM42Q9BTD8 480 aaKnown RBP20.96■□□□□ 0.95
LMX1A-204ENST00000489443 SLC52A2Q9HAB3 445 aa20.96■□□□□ 0.95
LMX1A-204ENST00000489443 MAP3K5Q99683 1374 aa20.96■□□□□ 0.95
LMX1A-204ENST00000489443 C5P01031 1676 aa20.95■□□□□ 0.94
LMX1A-204ENST00000489443 TAF1LQ8IZX4 1826 aa20.94■□□□□ 0.94
LMX1A-204ENST00000489443 NEFMP07197 916 aa20.94■□□□□ 0.94
LMX1A-204ENST00000489443 HMGB2P26583 209 aaKnown RBP20.94■□□□□ 0.94
LMX1A-204ENST00000489443 ATP6V1AP38606 617 aa20.94■□□□□ 0.94
LMX1A-204ENST00000489443 CASZ1Q86V15 1759 aa20.93■□□□□ 0.94
LMX1A-204ENST00000489443 PTCD1O75127 700 aaKnown RBP20.93■□□□□ 0.94
LMX1A-204ENST00000489443 ZBTB7AO95365 584 aa20.93■□□□□ 0.94
LMX1A-204ENST00000489443 IL17REQ8NFR9 667 aa20.93■□□□□ 0.94
LMX1A-204ENST00000489443 SPON1Q9HCB6 807 aa20.92■□□□□ 0.94
LMX1A-204ENST00000489443 LRP5O75197 1615 aa20.91■□□□□ 0.94
LMX1A-204ENST00000489443 TEFQ10587 303 aa20.91■□□□□ 0.94
LMX1A-204ENST00000489443 ITPK1Q13572 414 aa20.91■□□□□ 0.94
LMX1A-204ENST00000489443 PNNQ9H307 717 aaKnown RBP20.91■□□□□ 0.94
LMX1A-204ENST00000489443 ADAMTS7Q9UKP4 1686 aa20.91■□□□□ 0.94
LMX1A-204ENST00000489443 TUBGCP6Q96RT7 1819 aa20.9■□□□□ 0.94
LMX1A-204ENST00000489443 LINC00116Q8NCU8 138 aa20.9■□□□□ 0.94
LMX1A-204ENST00000489443 SLC4A9Q96Q91 983 aa20.9■□□□□ 0.94
LMX1A-204ENST00000489443 ATF5Q9Y2D1 282 aaPredicted RBP20.9■□□□□ 0.94
LMX1A-204ENST00000489443 PNPLA7Q6ZV29 1317 aa20.89■□□□□ 0.93
LMX1A-204ENST00000489443 MSH5O43196 834 aa20.89■□□□□ 0.93
LMX1A-204ENST00000489443 SLC39A6Q13433 755 aa20.89■□□□□ 0.93
LMX1A-204ENST00000489443 RTF1Q92541 710 aaKnown RBP20.89■□□□□ 0.93
LMX1A-204ENST00000489443 AK7Q96M32 723 aa20.89■□□□□ 0.93
LMX1A-204ENST00000489443 PLEKHF1Q96S99 279 aa20.89■□□□□ 0.93
LMX1A-204ENST00000489443 C4BP0C0L5 1744 aa20.89■□□□□ 0.93
LMX1A-204ENST00000489443 MRC1P22897 1456 aa20.88■□□□□ 0.93
LMX1A-204ENST00000489443 MAPK8IP3Q9UPT6 1336 aa20.88■□□□□ 0.93
LMX1A-204ENST00000489443 WDR43Q15061 677 aaKnown RBP eCLIP20.88■□□□□ 0.93
LMX1A-204ENST00000489443 QSER1Q2KHR3 1735 aa20.87■□□□□ 0.93
LMX1A-204ENST00000489443 MCM10Q7L590 875 aa20.87■□□□□ 0.93
LMX1A-204ENST00000489443 MTFR1LQ9H019 292 aa20.86■□□□□ 0.93
LMX1A-204ENST00000489443 ANP32CO43423 234 aa20.85■□□□□ 0.93
LMX1A-204ENST00000489443 DCTN1Q14203 1278 aa20.85■□□□□ 0.93
LMX1A-204ENST00000489443 SMIM5Q71RC9 77 aa20.85■□□□□ 0.93
LMX1A-204ENST00000489443 COL23A1Q86Y22 540 aaPredicted RBP20.85■□□□□ 0.93
LMX1A-204ENST00000489443 PPP1R1BQ9UD71 204 aaPredicted RBP20.85■□□□□ 0.93
LMX1A-204ENST00000489443 CEMIPQ8WUJ3 1361 aa20.85■□□□□ 0.93
LMX1A-204ENST00000489443 DLG5Q8TDM6 1919 aa20.84■□□□□ 0.93
LMX1A-204ENST00000489443 GNPATO15228 680 aa20.84■□□□□ 0.93
LMX1A-204ENST00000489443 HTATSF1O43719 755 aaKnown RBP20.84■□□□□ 0.93
LMX1A-204ENST00000489443 PHF14O94880 888 aa20.84■□□□□ 0.93
LMX1A-204ENST00000489443 NFE2L2Q16236 605 aa20.84■□□□□ 0.93
LMX1A-204ENST00000489443 TTC5Q8N0Z6 440 aa20.84■□□□□ 0.93
LMX1A-204ENST00000489443 SLC16A10Q8TF71 515 aa20.84■□□□□ 0.93
LMX1A-204ENST00000489443 ZNF831Q5JPB2 1677 aa20.83■□□□□ 0.93
LMX1A-204ENST00000489443 CCDC146Q8IYE0 955 aa20.83■□□□□ 0.93
LMX1A-204ENST00000489443 FLAD1Q8NFF5 587 aa20.83■□□□□ 0.93
LMX1A-204ENST00000489443 ADAMTS8Q9UP79 889 aa20.83■□□□□ 0.93
LMX1A-204ENST00000489443 SIPA1L3O60292 1781 aaPredicted RBP20.82■□□□□ 0.92
LMX1A-204ENST00000489443 UBR3Q6ZT12 1888 aa20.82■□□□□ 0.92
LMX1A-204ENST00000489443 AMIGO3Q86WK7 504 aa20.82■□□□□ 0.92
LMX1A-204ENST00000489443 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.81■□□□□ 0.92
LMX1A-204ENST00000489443 BTBD11A6QL63 1104 aa20.81■□□□□ 0.92
LMX1A-204ENST00000489443 PTGER2P43116 358 aa20.81■□□□□ 0.92
LMX1A-204ENST00000489443 RC3H1Q5TC82 1133 aaKnown RBP20.8■□□□□ 0.92
LMX1A-204ENST00000489443 ZNF790Q6PG37 636 aa20.8■□□□□ 0.92
LMX1A-204ENST00000489443 DNAJC10Q8IXB1 793 aa20.8■□□□□ 0.92
LMX1A-204ENST00000489443 COL5A3P25940 1745 aaPredicted RBP20.8■□□□□ 0.92
LMX1A-204ENST00000489443 KCPQ6ZWJ8 1503 aa20.79■□□□□ 0.92
LMX1A-204ENST00000489443 TJP1Q07157 1748 aa20.79■□□□□ 0.92
LMX1A-204ENST00000489443 SSFA2P28290 1259 aa20.79■□□□□ 0.92
LMX1A-204ENST00000489443 CRKLP46109 303 aaKnown RBP20.79■□□□□ 0.92
LMX1A-204ENST00000489443 CCDC184Q52MB2 194 aa20.79■□□□□ 0.92
LMX1A-204ENST00000489443 RTCBQ9Y3I0 505 aaKnown RBP20.79■□□□□ 0.92
LMX1A-204ENST00000489443 MYH14Q7Z406 1995 aaKnown RBP20.79■□□□□ 0.92
LMX1A-204ENST00000489443 CNTNAP4Q9C0A0 1308 aa20.78■□□□□ 0.92
LMX1A-204ENST00000489443 RIPK4P57078 832 aa20.78■□□□□ 0.92
LMX1A-204ENST00000489443 RUNDC1Q96C34 613 aa20.78■□□□□ 0.92
LMX1A-204ENST00000489443 ZNF496Q96IT1 587 aaPredicted RBP20.78■□□□□ 0.92
LMX1A-204ENST00000489443 UBR2Q8IWV8 1755 aa20.77■□□□□ 0.92
LMX1A-204ENST00000489443 KCNQ3O43525 872 aa20.77■□□□□ 0.92
LMX1A-204ENST00000489443 TMPOP42166 694 aaKnown RBP20.77■□□□□ 0.92
LMX1A-204ENST00000489443 TAF7Q15545 349 aaPredicted RBP20.77■□□□□ 0.92
LMX1A-204ENST00000489443 NEUROD2Q15784 382 aa20.77■□□□□ 0.92
LMX1A-204ENST00000489443 MSL1Q68DK7 614 aa20.77■□□□□ 0.92
LMX1A-204ENST00000489443 SGIP1Q9BQI5 828 aa20.77■□□□□ 0.92
LMX1A-204ENST00000489443 THUMPD2Q9BTF0 503 aaKnown RBP20.77■□□□□ 0.92
LMX1A-204ENST00000489443 RRP7AQ9Y3A4 280 aaKnown RBP20.77■□□□□ 0.92
LMX1A-204ENST00000489443 RPS6KA4O75676 772 aa20.76■□□□□ 0.91
LMX1A-204ENST00000489443 POLD1P28340 1107 aa20.76■□□□□ 0.91
LMX1A-204ENST00000489443 TRAPPC3LQ5T215 181 aa20.76■□□□□ 0.91
LMX1A-204ENST00000489443 VSIG10Q8N0Z9 540 aa20.76■□□□□ 0.91
LMX1A-204ENST00000489443 FMNL2Q96PY5 1086 aa20.76■□□□□ 0.91
LMX1A-204ENST00000489443 CYP19A1P11511 503 aaPredicted RBP20.75■□□□□ 0.91
LMX1A-204ENST00000489443 MIS18AQ9NYP9 233 aa20.75■□□□□ 0.91
LMX1A-204ENST00000489443 ARXQ96QS3 562 aa20.74■□□□□ 0.91
LMX1A-204ENST00000489443 MRS2Q9HD23 443 aa20.74■□□□□ 0.91
LMX1A-204ENST00000489443 CCDC87Q9NVE4 849 aa20.74■□□□□ 0.91
LMX1A-204ENST00000489443 CICQ96RK0 1608 aaPredicted RBP20.74■□□□□ 0.91
LMX1A-204ENST00000489443 HEG1Q9ULI3 1381 aa20.73■□□□□ 0.91
LMX1A-204ENST00000489443 INTS5Q6P9B9 1019 aaKnown RBP20.73■□□□□ 0.91
LMX1A-204ENST00000489443 ARHGEF1Q92888 912 aaKnown RBP20.73■□□□□ 0.91
LMX1A-204ENST00000489443 STARD3NLO95772 234 aa20.72■□□□□ 0.91
LMX1A-204ENST00000489443 ADRA2BP18089 450 aa20.72■□□□□ 0.91
LMX1A-204ENST00000489443 RFC4P35249 363 aa20.71■□□□□ 0.91
LMX1A-204ENST00000489443 LMOD3Q0VAK6 560 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms