RNA–Protein interactions for RNA: ENST00000489324.1

FDPS-214, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-214ENST00000489324 PTF1AQ7RTS3 328 aa12.79□□□□□ -0.36
FDPS-214ENST00000489324 ATG3Q9NT62 314 aa12.79□□□□□ -0.36
FDPS-214ENST00000489324 TRIM35Q9UPQ4 493 aa12.79□□□□□ -0.36
FDPS-214ENST00000489324 RRP7AQ9Y3A4 280 aaKnown RBP12.79□□□□□ -0.36
FDPS-214ENST00000489324 BTBD11A6QL63 1104 aa12.78□□□□□ -0.36
FDPS-214ENST00000489324 EN1Q05925 392 aaPredicted RBP12.78□□□□□ -0.36
FDPS-214ENST00000489324 DCTN1Q14203 1278 aa12.78□□□□□ -0.36
FDPS-214ENST00000489324 TTC5Q8N0Z6 440 aa12.78□□□□□ -0.36
FDPS-214ENST00000489324 PALLDQ8WX93 1383 aa12.78□□□□□ -0.36
FDPS-214ENST00000489324 TOGARAM1Q9Y4F4 1720 aa12.77□□□□□ -0.36
FDPS-214ENST00000489324 SCN11AQ9UI33 1791 aa12.77□□□□□ -0.36
FDPS-214ENST00000489324 TXNRD1Q16881 649 aa12.77□□□□□ -0.37
FDPS-214ENST00000489324 ZNF790Q6PG37 636 aa12.77□□□□□ -0.37
FDPS-214ENST00000489324 DEFB132Q7Z7B7 95 aa12.77□□□□□ -0.37
FDPS-214ENST00000489324 VSIG10Q8N0Z9 540 aa12.77□□□□□ -0.37
FDPS-214ENST00000489324 ASAP1Q9ULH1 1129 aa12.77□□□□□ -0.37
FDPS-214ENST00000489324 TNS1Q9HBL0 1735 aaKnown RBP12.76□□□□□ -0.37
FDPS-214ENST00000489324 RGPD3A6NKT7 1758 aaPredicted RBP12.76□□□□□ -0.37
FDPS-214ENST00000489324 RGPD4Q7Z3J3 1758 aa12.76□□□□□ -0.37
FDPS-214ENST00000489324 LOC102724428A0A0B4J2F2 783 aa12.76□□□□□ -0.37
FDPS-214ENST00000489324 SIK1P57059 783 aa12.76□□□□□ -0.37
FDPS-214ENST00000489324 EZH2Q15910 746 aaKnown RBP12.76□□□□□ -0.37
FDPS-214ENST00000489324 WDR63Q8IWG1 891 aa12.76□□□□□ -0.37
FDPS-214ENST00000489324 WWC1Q8IX03 1113 aa12.76□□□□□ -0.37
FDPS-214ENST00000489324 IL16Q14005 1332 aa12.76□□□□□ -0.37
FDPS-214ENST00000489324 CFAP44Q96MT7 982 aa12.75□□□□□ -0.37
FDPS-214ENST00000489324 FMNL2Q96PY5 1086 aa12.75□□□□□ -0.37
FDPS-214ENST00000489324 TEX13AQ9BXU3 409 aaPredicted RBP12.75□□□□□ -0.37
FDPS-214ENST00000489324 IFT57Q9NWB7 429 aa12.75□□□□□ -0.37
FDPS-214ENST00000489324 CCNL1Q9UK58 526 aaPredicted RBP12.75□□□□□ -0.37
FDPS-214ENST00000489324 BTAF1O14981 1849 aa12.74□□□□□ -0.37
FDPS-214ENST00000489324 CHL1O00533 1208 aa12.74□□□□□ -0.37
FDPS-214ENST00000489324 GNAI1P63096 354 aa12.74□□□□□ -0.37
FDPS-214ENST00000489324 NBPF14Q5TI25 921 aa12.74□□□□□ -0.37
FDPS-214ENST00000489324 PROM2Q8N271 834 aa12.74□□□□□ -0.37
FDPS-214ENST00000489324 THUMPD2Q9BTF0 503 aaKnown RBP12.74□□□□□ -0.37
FDPS-214ENST00000489324 TSPYL4Q9UJ04 414 aa12.74□□□□□ -0.37
FDPS-214ENST00000489324 ITGB4P16144 1822 aa12.74□□□□□ -0.37
FDPS-214ENST00000489324 ZNF853P0CG23 659 aa12.73□□□□□ -0.37
FDPS-214ENST00000489324 ATP6V1AP38606 617 aa12.73□□□□□ -0.37
FDPS-214ENST00000489324 SLC39A6Q13433 755 aa12.73□□□□□ -0.37
FDPS-214ENST00000489324 RBM42Q9BTD8 480 aaKnown RBP12.73□□□□□ -0.37
FDPS-214ENST00000489324 KAT6BQ8WYB5 2073 aa12.73□□□□□ -0.37
FDPS-214ENST00000489324 DLG5Q8TDM6 1919 aa12.71□□□□□ -0.37
FDPS-214ENST00000489324 PTCD1O75127 700 aaKnown RBP12.71□□□□□ -0.37
FDPS-214ENST00000489324 SNRPA1P09661 255 aaKnown RBP12.71□□□□□ -0.37
FDPS-214ENST00000489324 ZNF496Q96IT1 587 aaPredicted RBP12.71□□□□□ -0.37
FDPS-214ENST00000489324 CHMP4AQ9BY43 222 aa12.71□□□□□ -0.37
FDPS-214ENST00000489324 HEG1Q9ULI3 1381 aa12.7□□□□□ -0.38
FDPS-214ENST00000489324 SOS1Q07889 1333 aaPredicted RBP12.7□□□□□ -0.38
FDPS-214ENST00000489324 ZNF521Q96K83 1311 aa12.7□□□□□ -0.38
FDPS-214ENST00000489324 STARD3NLO95772 234 aa12.7□□□□□ -0.38
FDPS-214ENST00000489324 EIF4A1P60842 406 aaKnown RBP12.7□□□□□ -0.38
FDPS-214ENST00000489324 RC3H1Q5TC82 1133 aaKnown RBP12.7□□□□□ -0.38
FDPS-214ENST00000489324 LRRC4BQ9NT99 713 aa12.7□□□□□ -0.38
FDPS-214ENST00000489324 STK32BQ9NY57 414 aa12.7□□□□□ -0.38
FDPS-214ENST00000489324 EP400Q96L91 3159 aa12.7□□□□□ -0.38
FDPS-214ENST00000489324 ZNF831Q5JPB2 1677 aa12.7□□□□□ -0.38
FDPS-214ENST00000489324 PAPPAQ13219 1627 aa12.7□□□□□ -0.38
FDPS-214ENST00000489324 SIPA1L3O60292 1781 aaPredicted RBP12.69□□□□□ -0.38
FDPS-214ENST00000489324 CNTNAP4Q9C0A0 1308 aa12.69□□□□□ -0.38
FDPS-214ENST00000489324 KCPQ6ZWJ8 1503 aa12.69□□□□□ -0.38
FDPS-214ENST00000489324 LY75O60449 1722 aa12.69□□□□□ -0.38
FDPS-214ENST00000489324 HOXB7P09629 217 aa12.69□□□□□ -0.38
FDPS-214ENST00000489324 SLC4A9Q96Q91 983 aa12.69□□□□□ -0.38
FDPS-214ENST00000489324 MYH16Q9H6N6 1097 aa12.69□□□□□ -0.38
FDPS-214ENST00000489324 MIS18AQ9NYP9 233 aa12.69□□□□□ -0.38
FDPS-214ENST00000489324 SALL2Q9Y467 1007 aaPredicted RBP12.69□□□□□ -0.38
FDPS-214ENST00000489324 LAS1LQ9Y4W2 734 aaKnown RBP12.69□□□□□ -0.38
FDPS-214ENST00000489324 E9PSI1 815 aa12.68□□□□□ -0.38
FDPS-214ENST00000489324 KCNQ3O43525 872 aa12.68□□□□□ -0.38
FDPS-214ENST00000489324 GIGYF1O75420 1035 aaPredicted RBP12.68□□□□□ -0.38
FDPS-214ENST00000489324 GOLGA2Q08379 1002 aa12.68□□□□□ -0.38
FDPS-214ENST00000489324 ITPK1Q13572 414 aa12.68□□□□□ -0.38
FDPS-214ENST00000489324 FLAD1Q8NFF5 587 aa12.68□□□□□ -0.38
FDPS-214ENST00000489324 AKT1S1Q96B36 256 aa12.68□□□□□ -0.38
FDPS-214ENST00000489324 MBIPQ9NS73 344 aa12.68□□□□□ -0.38
FDPS-214ENST00000489324 RREB1Q92766 1687 aa12.67□□□□□ -0.38
FDPS-214ENST00000489324 CICQ96RK0 1608 aaPredicted RBP12.67□□□□□ -0.38
FDPS-214ENST00000489324 SLC15A2Q16348 729 aa12.67□□□□□ -0.38
FDPS-214ENST00000489324 DNAJC10Q8IXB1 793 aa12.67□□□□□ -0.38
FDPS-214ENST00000489324 CYP19A1P11511 503 aaPredicted RBP12.66□□□□□ -0.38
FDPS-214ENST00000489324 ADRA2BP18089 450 aa12.66□□□□□ -0.38
FDPS-214ENST00000489324 HNRNPUQ00839 825 aaKnown RBP eCLIP12.66□□□□□ -0.38
FDPS-214ENST00000489324 LINC00116Q8NCU8 138 aa12.66□□□□□ -0.38
FDPS-214ENST00000489324 AK7Q96M32 723 aa12.66□□□□□ -0.38
FDPS-214ENST00000489324 VIRMAQ69YN4 1812 aaKnown RBP12.66□□□□□ -0.38
FDPS-214ENST00000489324 ERBB4Q15303 1308 aa12.65□□□□□ -0.38
FDPS-214ENST00000489324 SSFA2P28290 1259 aa12.65□□□□□ -0.38
FDPS-214ENST00000489324 CCDC87Q9NVE4 849 aa12.65□□□□□ -0.38
FDPS-214ENST00000489324 UBR2Q8IWV8 1755 aa12.65□□□□□ -0.38
FDPS-214ENST00000489324 ZBED9Q6R2W3 1325 aa12.64□□□□□ -0.39
FDPS-214ENST00000489324 C5P01031 1676 aa12.64□□□□□ -0.39
FDPS-214ENST00000489324 KDM3BQ7LBC6 1761 aa12.64□□□□□ -0.39
FDPS-214ENST00000489324 RPS6KA4O75676 772 aa12.64□□□□□ -0.39
FDPS-214ENST00000489324 CRKLP46109 303 aaKnown RBP12.64□□□□□ -0.39
FDPS-214ENST00000489324 KCNQ4P56696 695 aa12.64□□□□□ -0.39
FDPS-214ENST00000489324 ANO8Q9HCE9 1232 aaPredicted RBP12.64□□□□□ -0.39
FDPS-214ENST00000489324 TFCP2L1Q9NZI6 479 aa12.64□□□□□ -0.39
FDPS-214ENST00000489324 RTCBQ9Y3I0 505 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms